Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
PMS1P54277 LSM3P4-201ENST00000502948 309 ntBASIC6.31□□□□□ -1.4
PMS1P54277 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC6.31□□□□□ -1.4
PMS1P54277 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC6.31□□□□□ -1.4
PMS1P54277 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC6.31□□□□□ -1.4
PMS1P54277 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC6.31□□□□□ -1.4
PMS1P54277 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
PMS1P54277 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC6.31□□□□□ -1.4
PMS1P54277 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC6.31□□□□□ -1.4
PMS1P54277 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC6.31□□□□□ -1.4
PMS1P54277 HSPE1P2-201ENST00000554777 306 ntBASIC6.31□□□□□ -1.4
PMS1P54277 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC6.31□□□□□ -1.4
PMS1P54277 AC026826.3-201ENST00000561747 158 ntBASIC6.31□□□□□ -1.4
PMS1P54277 AC009962.1-201ENST00000567327 3813 ntBASIC6.31□□□□□ -1.4
PMS1P54277 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC6.31□□□□□ -1.4
PMS1P54277 AP001011.1-201ENST00000583546 690 ntTSL 3 BASIC6.31□□□□□ -1.4
PMS1P54277 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
PMS1P54277 AC091805.2-201ENST00000603848 235 ntBASIC6.31□□□□□ -1.4
PMS1P54277 AC106028.5-201ENST00000610332 395 ntBASIC6.31□□□□□ -1.4
PMS1P54277 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
PMS1P54277 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC6.31□□□□□ -1.4
PMS1P54277 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
PMS1P54277 LINC01739-205ENST00000641890 573 ntBASIC6.31□□□□□ -1.4
PMS1P54277 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC6.31□□□□□ -1.4
PMS1P54277 AC007842.1-201ENST00000597336 2039 ntBASIC6.31□□□□□ -1.4
PMS1P54277 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
PMS1P54277 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
PMS1P54277 ARHGAP42P1-201ENST00000507474 1976 ntBASIC6.31□□□□□ -1.4
PMS1P54277 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC6.31□□□□□ -1.4
PMS1P54277 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
PMS1P54277 PDZK1P1-202ENST00000425209 1350 ntBASIC6.31□□□□□ -1.4
PMS1P54277 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC6.31□□□□□ -1.4
PMS1P54277 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
PMS1P54277 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC6.3□□□□□ -1.4
PMS1P54277 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
PMS1P54277 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC6.3□□□□□ -1.4
PMS1P54277 RPL11P3-201ENST00000395256 523 ntBASIC6.3□□□□□ -1.4
PMS1P54277 AC136624.1-201ENST00000400791 413 ntBASIC6.3□□□□□ -1.4
PMS1P54277 AL354868.1-201ENST00000417077 482 ntBASIC6.3□□□□□ -1.4
PMS1P54277 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
PMS1P54277 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC6.3□□□□□ -1.4
PMS1P54277 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC6.3□□□□□ -1.4
PMS1P54277 AC004448.2-201ENST00000422360 586 ntBASIC6.3□□□□□ -1.4
PMS1P54277 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC6.3□□□□□ -1.4
PMS1P54277 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC6.3□□□□□ -1.4
PMS1P54277 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC6.3□□□□□ -1.4
PMS1P54277 MGAT2P2-201ENST00000427194 797 ntBASIC6.3□□□□□ -1.4
PMS1P54277 ARL6IP1P2-201ENST00000431356 563 ntBASIC6.3□□□□□ -1.4
PMS1P54277 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
PMS1P54277 TUBB4BP6-201ENST00000437576 479 ntBASIC6.3□□□□□ -1.4
PMS1P54277 EIF5AP4-201ENST00000441206 465 ntBASIC6.3□□□□□ -1.4
PMS1P54277 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC6.3□□□□□ -1.4
PMS1P54277 AL034418.1-201ENST00000448675 860 ntBASIC6.3□□□□□ -1.4
PMS1P54277 AC118758.1-202ENST00000454719 225 ntBASIC6.3□□□□□ -1.4
PMS1P54277 RNU7-27P-201ENST00000459281 62 ntBASIC6.3□□□□□ -1.4
PMS1P54277 RPL32P33-201ENST00000487023 394 ntBASIC6.3□□□□□ -1.4
PMS1P54277 AC009120.1-201ENST00000493458 473 ntBASIC6.3□□□□□ -1.4
PMS1P54277 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC6.3□□□□□ -1.4
PMS1P54277 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC6.3□□□□□ -1.4
PMS1P54277 AC122718.2-201ENST00000505325 591 ntBASIC6.3□□□□□ -1.4
PMS1P54277 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC6.3□□□□□ -1.4
PMS1P54277 AC114781.3-201ENST00000512083 142 ntBASIC6.3□□□□□ -1.4
PMS1P54277 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC6.3□□□□□ -1.4
PMS1P54277 HMGB1P23-201ENST00000518743 568 ntBASIC6.3□□□□□ -1.4
PMS1P54277 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC6.3□□□□□ -1.4
PMS1P54277 AP003396.4-201ENST00000527574 265 ntBASIC6.3□□□□□ -1.4
PMS1P54277 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC6.3□□□□□ -1.4
PMS1P54277 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC6.3□□□□□ -1.4
PMS1P54277 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC6.3□□□□□ -1.4
PMS1P54277 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC6.3□□□□□ -1.4
PMS1P54277 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC6.3□□□□□ -1.4
PMS1P54277 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC6.3□□□□□ -1.4
PMS1P54277 NDUFA8P1-201ENST00000605525 367 ntBASIC6.3□□□□□ -1.4
PMS1P54277 AL352984.2-201ENST00000611153 546 ntBASIC6.3□□□□□ -1.4
PMS1P54277 AC026368.1-201ENST00000614934 690 ntBASIC6.3□□□□□ -1.4
PMS1P54277 AL356274.1-201ENST00000617064 410 ntBASIC6.3□□□□□ -1.4
PMS1P54277 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
PMS1P54277 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
PMS1P54277 AC024884.1-201ENST00000620583 399 ntBASIC6.3□□□□□ -1.4
PMS1P54277 AL356266.1-201ENST00000623311 483 ntBASIC6.3□□□□□ -1.4
PMS1P54277 AC019226.1-201ENST00000625666 515 ntBASIC6.3□□□□□ -1.4
PMS1P54277 AC025048.6-202ENST00000627667 438 ntBASIC6.3□□□□□ -1.4
PMS1P54277 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
PMS1P54277 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
PMS1P54277 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
PMS1P54277 AL121950.1-201ENST00000624993 2077 ntBASIC6.3□□□□□ -1.4
PMS1P54277 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
PMS1P54277 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
PMS1P54277 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC6.3□□□□□ -1.4
PMS1P54277 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC6.3□□□□□ -1.4
PMS1P54277 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC6.29□□□□□ -1.4
PMS1P54277 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC6.29□□□□□ -1.4
PMS1P54277 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC6.29□□□□□ -1.4
PMS1P54277 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
PMS1P54277 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC6.29□□□□□ -1.4
PMS1P54277 AL391704.1-201ENST00000422206 2368 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
PMS1P54277 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC6.29□□□□□ -1.4
PMS1P54277 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
PMS1P54277 SNORA75-201ENST00000384158 137 ntBASIC6.29□□□□□ -1.4
PMS1P54277 RNU6-1042P-201ENST00000384204 107 ntBASIC6.29□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 130.8 ms