Protein–RNA interactions for Protein: P47902

CDX1, Homeobox protein CDX-1, humanhuman

Predicted RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1P47902 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CDX1P47902 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CDX1P47902 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CDX1P47902 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CDX1P47902 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC4.24□□□□□ -1.73
CDX1P47902 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC4.24□□□□□ -1.73
CDX1P47902 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CDX1P47902 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CDX1P47902 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
CDX1P47902 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
CDX1P47902 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC4.24□□□□□ -1.73
CDX1P47902 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CDX1P47902 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC4.24□□□□□ -1.73
CDX1P47902 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CDX1P47902 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CDX1P47902 SALL4P2-201ENST00000423288 2910 ntBASIC4.24□□□□□ -1.73
CDX1P47902 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
CDX1P47902 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
CDX1P47902 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CDX1P47902 AL360270.2-201ENST00000562952 5985 ntBASIC4.24□□□□□ -1.73
CDX1P47902 IL6STP1-201ENST00000346911 1020 ntBASIC4.24□□□□□ -1.73
CDX1P47902 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC4.24□□□□□ -1.73
CDX1P47902 RNA5SP183-201ENST00000362452 119 ntBASIC4.24□□□□□ -1.73
CDX1P47902 RNU5B-4P-201ENST00000363508 111 ntBASIC4.24□□□□□ -1.73
CDX1P47902 RNA5SP335-201ENST00000363817 110 ntBASIC4.24□□□□□ -1.73
CDX1P47902 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CDX1P47902 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
CDX1P47902 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC4.24□□□□□ -1.73
CDX1P47902 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC4.24□□□□□ -1.73
CDX1P47902 RNU6-1176P-201ENST00000390955 107 ntBASIC4.24□□□□□ -1.73
CDX1P47902 RNU6-932P-201ENST00000391108 106 ntBASIC4.24□□□□□ -1.73
CDX1P47902 EIF4A1P3-201ENST00000411521 244 ntBASIC4.24□□□□□ -1.73
CDX1P47902 AL390774.1-201ENST00000411924 246 ntBASIC4.24□□□□□ -1.73
CDX1P47902 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC4.24□□□□□ -1.73
CDX1P47902 BX510359.3-201ENST00000422168 306 ntBASIC4.24□□□□□ -1.73
CDX1P47902 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC4.24□□□□□ -1.73
CDX1P47902 RPL7L1P9-201ENST00000431298 745 ntBASIC4.24□□□□□ -1.73
CDX1P47902 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC4.24□□□□□ -1.73
CDX1P47902 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC4.24□□□□□ -1.73
CDX1P47902 CYCSP6-201ENST00000434498 302 ntBASIC4.24□□□□□ -1.73
CDX1P47902 RPS26P30-201ENST00000443431 335 ntBASIC4.24□□□□□ -1.73
CDX1P47902 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC4.24□□□□□ -1.73
CDX1P47902 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC4.24□□□□□ -1.73
CDX1P47902 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC4.24□□□□□ -1.73
CDX1P47902 AC013733.1-201ENST00000449835 985 ntTSL 4 BASIC4.24□□□□□ -1.73
CDX1P47902 OR51B8P-201ENST00000449892 769 ntBASIC4.24□□□□□ -1.73
CDX1P47902 MRPL35P4-201ENST00000453682 566 ntBASIC4.24□□□□□ -1.73
CDX1P47902 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC4.24□□□□□ -1.73
CDX1P47902 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC4.24□□□□□ -1.73
CDX1P47902 RPL30P11-201ENST00000495304 339 ntBASIC4.24□□□□□ -1.73
CDX1P47902 NIFKP7-201ENST00000503365 834 ntBASIC4.24□□□□□ -1.73
CDX1P47902 AC024558.1-201ENST00000505008 528 ntBASIC4.24□□□□□ -1.73
CDX1P47902 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC4.24□□□□□ -1.73
CDX1P47902 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC4.24□□□□□ -1.73
CDX1P47902 CDC42P3-201ENST00000518493 633 ntBASIC4.24□□□□□ -1.73
CDX1P47902 LY96-202ENST00000518893 430 ntTSL 3 BASIC4.24□□□□□ -1.73
CDX1P47902 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC4.24□□□□□ -1.73
CDX1P47902 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC4.24□□□□□ -1.73
CDX1P47902 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC4.24□□□□□ -1.73
CDX1P47902 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CDX1P47902 AC068446.3-201ENST00000555285 382 ntBASIC4.24□□□□□ -1.73
CDX1P47902 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC4.24□□□□□ -1.73
CDX1P47902 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CDX1P47902 CYP2C60P-201ENST00000566088 139 ntBASIC4.24□□□□□ -1.73
CDX1P47902 AP005119.2-201ENST00000579735 1105 ntBASIC4.24□□□□□ -1.73
CDX1P47902 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC4.24□□□□□ -1.73
CDX1P47902 AC090312.1-201ENST00000580637 348 ntBASIC4.24□□□□□ -1.73
CDX1P47902 MIR4512-201ENST00000583257 77 ntBASIC4.24□□□□□ -1.73
CDX1P47902 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC4.24□□□□□ -1.73
CDX1P47902 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC4.24□□□□□ -1.73
CDX1P47902 AC093765.1-201ENST00000603758 881 ntBASIC4.24□□□□□ -1.73
CDX1P47902 BNIP3P4-201ENST00000604946 565 ntBASIC4.24□□□□□ -1.73
CDX1P47902 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC4.24□□□□□ -1.73
CDX1P47902 OR7A19P-201ENST00000608051 733 ntBASIC4.24□□□□□ -1.73
CDX1P47902 AC097505.1-201ENST00000610199 565 ntBASIC4.24□□□□□ -1.73
CDX1P47902 AC022079.2-201ENST00000619739 566 ntBASIC4.24□□□□□ -1.73
CDX1P47902 AC092608.3-201ENST00000625017 386 ntBASIC4.24□□□□□ -1.73
CDX1P47902 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC4.24□□□□□ -1.73
CDX1P47902 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC4.24□□□□□ -1.73
CDX1P47902 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC4.24□□□□□ -1.73
CDX1P47902 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CDX1P47902 AP000542.2-201ENST00000623199 6179 ntBASIC4.24□□□□□ -1.73
CDX1P47902 PANDAR-201ENST00000629595 1506 ntBASIC4.24□□□□□ -1.73
CDX1P47902 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC4.24□□□□□ -1.73
CDX1P47902 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CDX1P47902 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CDX1P47902 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CDX1P47902 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC4.24□□□□□ -1.73
CDX1P47902 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC4.24□□□□□ -1.73
CDX1P47902 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC4.24□□□□□ -1.73
CDX1P47902 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC4.23□□□□□ -1.73
CDX1P47902 MAPK10-304ENST00000641341 3984 ntBASIC4.23□□□□□ -1.73
CDX1P47902 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CDX1P47902 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC4.23□□□□□ -1.73
CDX1P47902 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CDX1P47902 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
CDX1P47902 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CDX1P47902 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
CDX1P47902 AC005294.1-201ENST00000355509 281 ntBASIC4.23□□□□□ -1.73
CDX1P47902 RNU5B-1-201ENST00000363286 116 ntBASIC4.23□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 107.2 ms