Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC4.2□□□□□ -1.74
NKX2-1P43699 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC4.2□□□□□ -1.74
NKX2-1P43699 MYLK-221ENST00000583087 678 ntTSL 4 BASIC4.2□□□□□ -1.74
NKX2-1P43699 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC4.2□□□□□ -1.74
NKX2-1P43699 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC4.2□□□□□ -1.74
NKX2-1P43699 AC115085.1-201ENST00000588924 229 ntBASIC4.2□□□□□ -1.74
NKX2-1P43699 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC4.2□□□□□ -1.74
NKX2-1P43699 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC4.2□□□□□ -1.74
NKX2-1P43699 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC4.2□□□□□ -1.74
NKX2-1P43699 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC4.2□□□□□ -1.74
NKX2-1P43699 AC008814.1-201ENST00000603797 406 ntBASIC4.2□□□□□ -1.74
NKX2-1P43699 AC112220.2-201ENST00000605513 533 ntBASIC4.2□□□□□ -1.74
NKX2-1P43699 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
NKX2-1P43699 AC024060.1-201ENST00000607052 494 ntBASIC4.2□□□□□ -1.74
NKX2-1P43699 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC4.2□□□□□ -1.74
NKX2-1P43699 AC015908.5-201ENST00000623289 343 ntBASIC4.2□□□□□ -1.74
NKX2-1P43699 AC104985.3-201ENST00000623479 597 ntBASIC4.2□□□□□ -1.74
NKX2-1P43699 OR2L1P-202ENST00000641567 1023 ntBASIC4.2□□□□□ -1.74
NKX2-1P43699 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
NKX2-1P43699 YES1P1-201ENST00000418510 1628 ntBASIC4.2□□□□□ -1.74
NKX2-1P43699 AL353743.4-201ENST00000422653 1547 ntBASIC4.2□□□□□ -1.74
NKX2-1P43699 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.2□□□□□ -1.74
NKX2-1P43699 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.19□□□□□ -1.74
NKX2-1P43699 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC4.19□□□□□ -1.74
NKX2-1P43699 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
NKX2-1P43699 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
NKX2-1P43699 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
NKX2-1P43699 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
NKX2-1P43699 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
NKX2-1P43699 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
NKX2-1P43699 CASC19-204ENST00000641001 2055 ntBASIC4.19□□□□□ -1.74
NKX2-1P43699 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC4.19□□□□□ -1.74
NKX2-1P43699 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
NKX2-1P43699 MIR621-201ENST00000384919 96 ntBASIC4.19□□□□□ -1.74
NKX2-1P43699 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
NKX2-1P43699 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
NKX2-1P43699 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC4.19□□□□□ -1.74
NKX2-1P43699 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC4.19□□□□□ -1.74
NKX2-1P43699 RPL7P27-201ENST00000403775 720 ntBASIC4.19□□□□□ -1.74
NKX2-1P43699 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC4.19□□□□□ -1.74
NKX2-1P43699 RNA5SP487-201ENST00000410186 122 ntBASIC4.19□□□□□ -1.74
NKX2-1P43699 SLC20A1P1-201ENST00000413906 956 ntBASIC4.19□□□□□ -1.74
NKX2-1P43699 Z93019.1-201ENST00000416450 973 ntBASIC4.19□□□□□ -1.74
NKX2-1P43699 AC234782.4-201ENST00000417646 1048 ntBASIC4.19□□□□□ -1.74
NKX2-1P43699 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC4.19□□□□□ -1.74
NKX2-1P43699 AC092447.3-201ENST00000426027 686 ntBASIC4.19□□□□□ -1.74
NKX2-1P43699 FGF12-202ENST00000430714 603 ntTSL 2 BASIC4.19□□□□□ -1.74
NKX2-1P43699 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC4.19□□□□□ -1.74
NKX2-1P43699 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC4.19□□□□□ -1.74
NKX2-1P43699 ELOCP11-201ENST00000436690 332 ntBASIC4.19□□□□□ -1.74
NKX2-1P43699 ELOCP16-201ENST00000444494 332 ntBASIC4.19□□□□□ -1.74
NKX2-1P43699 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
NKX2-1P43699 EIF2S2P2-201ENST00000447161 982 ntBASIC4.19□□□□□ -1.74
NKX2-1P43699 TRY2P-201ENST00000448860 689 ntBASIC4.19□□□□□ -1.74
NKX2-1P43699 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC4.19□□□□□ -1.74
NKX2-1P43699 BX248409.1-201ENST00000455497 255 ntBASIC4.19□□□□□ -1.74
NKX2-1P43699 RPL7P32-201ENST00000457119 744 ntBASIC4.19□□□□□ -1.74
NKX2-1P43699 AC094085.1-201ENST00000468914 584 ntBASIC4.19□□□□□ -1.74
NKX2-1P43699 RPL23AP37-201ENST00000479658 549 ntBASIC4.19□□□□□ -1.74
NKX2-1P43699 AC090686.1-201ENST00000481577 749 ntBASIC4.19□□□□□ -1.74
NKX2-1P43699 AC097173.1-201ENST00000505862 819 ntBASIC4.19□□□□□ -1.74
NKX2-1P43699 AC098799.3-201ENST00000506095 438 ntBASIC4.19□□□□□ -1.74
NKX2-1P43699 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC4.19□□□□□ -1.74
NKX2-1P43699 SNORA43.3-201ENST00000517240 103 ntBASIC4.19□□□□□ -1.74
NKX2-1P43699 AC034205.1-201ENST00000520621 638 ntBASIC4.19□□□□□ -1.74
NKX2-1P43699 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC4.19□□□□□ -1.74
NKX2-1P43699 AC005363.1-201ENST00000530779 351 ntBASIC4.19□□□□□ -1.74
NKX2-1P43699 OR8K4P-201ENST00000534608 872 ntBASIC4.19□□□□□ -1.74
NKX2-1P43699 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC4.19□□□□□ -1.74
NKX2-1P43699 AC006518.2-201ENST00000542513 940 ntBASIC4.19□□□□□ -1.74
NKX2-1P43699 GNG2-208ENST00000554875 430 ntTSL 5 BASIC4.19□□□□□ -1.74
NKX2-1P43699 NDUFB4P11-201ENST00000560510 395 ntBASIC4.19□□□□□ -1.74
NKX2-1P43699 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
NKX2-1P43699 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC4.19□□□□□ -1.74
NKX2-1P43699 BNIP3P4-201ENST00000604946 565 ntBASIC4.19□□□□□ -1.74
NKX2-1P43699 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC4.19□□□□□ -1.74
NKX2-1P43699 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC4.19□□□□□ -1.74
NKX2-1P43699 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC4.19□□□□□ -1.74
NKX2-1P43699 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC4.19□□□□□ -1.74
NKX2-1P43699 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC4.19□□□□□ -1.74
NKX2-1P43699 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.19□□□□□ -1.74
NKX2-1P43699 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
NKX2-1P43699 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.19□□□□□ -1.74
NKX2-1P43699 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC4.19□□□□□ -1.74
NKX2-1P43699 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
NKX2-1P43699 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
NKX2-1P43699 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC4.19□□□□□ -1.74
NKX2-1P43699 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
NKX2-1P43699 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
NKX2-1P43699 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC4.18□□□□□ -1.74
NKX2-1P43699 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
NKX2-1P43699 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC4.18□□□□□ -1.74
NKX2-1P43699 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC4.18□□□□□ -1.74
NKX2-1P43699 ST7-212ENST00000422922 1887 ntTSL 5 BASIC4.18□□□□□ -1.74
NKX2-1P43699 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC4.18□□□□□ -1.74
NKX2-1P43699 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC4.18□□□□□ -1.74
NKX2-1P43699 CYP4Z2P-201ENST00000423332 1512 ntBASIC4.18□□□□□ -1.74
NKX2-1P43699 AL512646.1-201ENST00000269395 1077 ntBASIC4.18□□□□□ -1.74
NKX2-1P43699 RN7SKP292-201ENST00000365522 317 ntBASIC4.18□□□□□ -1.74
NKX2-1P43699 MIR105-1-201ENST00000385222 81 ntBASIC4.18□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 104.3 ms