Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 CDH12P3-201ENST00000517935 295 ntBASIC4.39□□□□□ -1.71
RPA3P35244 CDH12P1-201ENST00000518435 295 ntBASIC4.39□□□□□ -1.71
RPA3P35244 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC4.39□□□□□ -1.71
RPA3P35244 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
RPA3P35244 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC4.39□□□□□ -1.71
RPA3P35244 OR1AB1P-201ENST00000585564 761 ntBASIC4.39□□□□□ -1.71
RPA3P35244 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC4.39□□□□□ -1.71
RPA3P35244 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC4.39□□□□□ -1.71
RPA3P35244 AC012603.1-201ENST00000606424 528 ntBASIC4.39□□□□□ -1.71
RPA3P35244 AC020634.1-201ENST00000608701 549 ntBASIC4.39□□□□□ -1.71
RPA3P35244 AL158196.1-201ENST00000616786 434 ntBASIC4.39□□□□□ -1.71
RPA3P35244 AL122125.1-201ENST00000616999 600 ntBASIC4.39□□□□□ -1.71
RPA3P35244 RN7SL722P-201ENST00000617780 284 ntBASIC4.39□□□□□ -1.71
RPA3P35244 RN7SL565P-201ENST00000618246 284 ntBASIC4.39□□□□□ -1.71
RPA3P35244 AL158062.1-201ENST00000619632 745 ntBASIC4.39□□□□□ -1.71
RPA3P35244 AP005019.3-201ENST00000620418 560 ntBASIC4.39□□□□□ -1.71
RPA3P35244 AC006065.6-201ENST00000625201 545 ntBASIC4.39□□□□□ -1.71
RPA3P35244 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC4.39□□□□□ -1.71
RPA3P35244 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC4.39□□□□□ -1.71
RPA3P35244 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC4.39□□□□□ -1.71
RPA3P35244 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
RPA3P35244 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
RPA3P35244 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC4.39□□□□□ -1.71
RPA3P35244 AL606537.1-201ENST00000607258 2011 ntBASIC4.39□□□□□ -1.71
RPA3P35244 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
RPA3P35244 LINC00343-202ENST00000415294 1320 ntTSL 5 BASIC4.39□□□□□ -1.71
RPA3P35244 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
RPA3P35244 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.39□□□□□ -1.71
RPA3P35244 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.39□□□□□ -1.71
RPA3P35244 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
RPA3P35244 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
RPA3P35244 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
RPA3P35244 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
RPA3P35244 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
RPA3P35244 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC4.38□□□□□ -1.71
RPA3P35244 SNORD66.1-201ENST00000391230 76 ntBASIC4.38□□□□□ -1.71
RPA3P35244 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
RPA3P35244 AC106901.1-201ENST00000425086 698 ntBASIC4.38□□□□□ -1.71
RPA3P35244 NPM1P26-201ENST00000426339 738 ntBASIC4.38□□□□□ -1.71
RPA3P35244 VN1R96P-201ENST00000446052 858 ntBASIC4.38□□□□□ -1.71
RPA3P35244 AL591363.1-201ENST00000450091 483 ntBASIC4.38□□□□□ -1.71
RPA3P35244 RPS6P2-201ENST00000454208 705 ntBASIC4.38□□□□□ -1.71
RPA3P35244 NDUFA12P1-201ENST00000455914 406 ntBASIC4.38□□□□□ -1.71
RPA3P35244 RPS27AP17-201ENST00000463344 455 ntBASIC4.38□□□□□ -1.71
RPA3P35244 RPL7AP10-201ENST00000481016 791 ntBASIC4.38□□□□□ -1.71
RPA3P35244 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC4.38□□□□□ -1.71
RPA3P35244 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC4.38□□□□□ -1.71
RPA3P35244 AC139783.2-201ENST00000504847 1145 ntBASIC4.38□□□□□ -1.71
RPA3P35244 AC093720.1-201ENST00000505681 714 ntBASIC4.38□□□□□ -1.71
RPA3P35244 RNA5SP497-201ENST00000516081 97 ntBASIC4.38□□□□□ -1.71
RPA3P35244 RN7SKP92-201ENST00000517266 244 ntBASIC4.38□□□□□ -1.71
RPA3P35244 IGHV3-63-201ENST00000518422 341 ntBASIC4.38□□□□□ -1.71
RPA3P35244 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC4.38□□□□□ -1.71
RPA3P35244 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC4.38□□□□□ -1.71
RPA3P35244 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC4.38□□□□□ -1.71
RPA3P35244 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
RPA3P35244 AP001804.2-201ENST00000533932 910 ntBASIC4.38□□□□□ -1.71
RPA3P35244 OR5AN2P-201ENST00000534535 896 ntBASIC4.38□□□□□ -1.71
RPA3P35244 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC4.38□□□□□ -1.71
RPA3P35244 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.38□□□□□ -1.71
RPA3P35244 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC4.38□□□□□ -1.71
RPA3P35244 AC104785.1-201ENST00000603220 588 ntBASIC4.38□□□□□ -1.71
RPA3P35244 AL133406.3-201ENST00000606817 541 ntBASIC4.38□□□□□ -1.71
RPA3P35244 AC100847.1-201ENST00000611316 481 ntBASIC4.38□□□□□ -1.71
RPA3P35244 MIR6891-201ENST00000618788 93 ntBASIC4.38□□□□□ -1.71
RPA3P35244 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC4.38□□□□□ -1.71
RPA3P35244 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC4.38□□□□□ -1.71
RPA3P35244 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
RPA3P35244 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
RPA3P35244 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC4.38□□□□□ -1.71
RPA3P35244 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
RPA3P35244 AL592148.3-201ENST00000608771 2646 ntBASIC4.38□□□□□ -1.71
RPA3P35244 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
RPA3P35244 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC4.37□□□□□ -1.71
RPA3P35244 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
RPA3P35244 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.37□□□□□ -1.71
RPA3P35244 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
RPA3P35244 RNU4-44P-201ENST00000363050 141 ntBASIC4.37□□□□□ -1.71
RPA3P35244 MIR659-201ENST00000384963 97 ntBASIC4.37□□□□□ -1.71
RPA3P35244 RPS4XP9-201ENST00000405151 780 ntBASIC4.37□□□□□ -1.71
RPA3P35244 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC4.37□□□□□ -1.71
RPA3P35244 AC006065.1-201ENST00000422539 802 ntBASIC4.37□□□□□ -1.71
RPA3P35244 DNAJA1P1-201ENST00000425106 1187 ntBASIC4.37□□□□□ -1.71
RPA3P35244 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.37□□□□□ -1.71
RPA3P35244 AL451050.1-201ENST00000450126 415 ntBASIC4.37□□□□□ -1.71
RPA3P35244 OR52A4P-201ENST00000472867 958 ntBASIC4.37□□□□□ -1.71
RPA3P35244 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC4.37□□□□□ -1.71
RPA3P35244 KRTAP5-14P-201ENST00000502328 121 ntBASIC4.37□□□□□ -1.71
RPA3P35244 AC111000.3-201ENST00000508057 576 ntBASIC4.37□□□□□ -1.71
RPA3P35244 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC4.37□□□□□ -1.71
RPA3P35244 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC4.37□□□□□ -1.71
RPA3P35244 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC4.37□□□□□ -1.71
RPA3P35244 UBTFL9-201ENST00000534504 1148 ntBASIC4.37□□□□□ -1.71
RPA3P35244 AC069234.2-201ENST00000541383 575 ntTSL 3 BASIC4.37□□□□□ -1.71
RPA3P35244 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC4.37□□□□□ -1.71
RPA3P35244 LINC02463-201ENST00000546414 497 ntTSL 3 BASIC4.37□□□□□ -1.71
RPA3P35244 DUX4L52-201ENST00000549363 777 ntBASIC4.37□□□□□ -1.71
RPA3P35244 CR383656.6-201ENST00000550518 394 ntBASIC4.37□□□□□ -1.71
RPA3P35244 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC4.37□□□□□ -1.71
RPA3P35244 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4.37□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 86.1 ms