Protein–RNA interactions for Protein: P33076

CIITA, MHC class II transactivator, humanhuman

Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIITAP33076 AC068020.1-201ENST00000594215 661 ntBASIC5.45□□□□□ -1.54
CIITAP33076 AC130352.1-201ENST00000602979 661 ntBASIC5.45□□□□□ -1.54
CIITAP33076 IGKV2OR2-2-201ENST00000605025 300 ntBASIC5.45□□□□□ -1.54
CIITAP33076 AC015849.2-201ENST00000605738 409 ntBASIC5.45□□□□□ -1.54
CIITAP33076 FAM27B-201ENST00000610601 213 ntBASIC5.45□□□□□ -1.54
CIITAP33076 AC008759.3-201ENST00000613300 508 ntBASIC5.45□□□□□ -1.54
CIITAP33076 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC5.45□□□□□ -1.54
CIITAP33076 AL356863.1-201ENST00000623378 1080 ntBASIC5.45□□□□□ -1.54
CIITAP33076 AL078595.3-201ENST00000623815 1166 ntBASIC5.45□□□□□ -1.54
CIITAP33076 AL109659.3-201ENST00000624985 950 ntBASIC5.45□□□□□ -1.54
CIITAP33076 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC5.45□□□□□ -1.54
CIITAP33076 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
CIITAP33076 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
CIITAP33076 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
CIITAP33076 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC5.45□□□□□ -1.54
CIITAP33076 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
CIITAP33076 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
CIITAP33076 AC007382.1-201ENST00000624376 2618 ntBASIC5.44□□□□□ -1.54
CIITAP33076 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
CIITAP33076 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CIITAP33076 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC5.44□□□□□ -1.54
CIITAP33076 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC5.44□□□□□ -1.54
CIITAP33076 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
CIITAP33076 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC5.44□□□□□ -1.54
CIITAP33076 PTP4A1P3-201ENST00000433661 420 ntBASIC5.44□□□□□ -1.54
CIITAP33076 AL772161.1-201ENST00000439130 476 ntBASIC5.44□□□□□ -1.54
CIITAP33076 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC5.44□□□□□ -1.54
CIITAP33076 AL139824.2-201ENST00000458731 1095 ntBASIC5.44□□□□□ -1.54
CIITAP33076 snoU109.3-201ENST00000459477 145 ntBASIC5.44□□□□□ -1.54
CIITAP33076 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC5.44□□□□□ -1.54
CIITAP33076 AC021146.7-201ENST00000509604 775 ntBASIC5.44□□□□□ -1.54
CIITAP33076 RN7SKP276-201ENST00000516242 268 ntBASIC5.44□□□□□ -1.54
CIITAP33076 MTCYBP19-201ENST00000517463 1124 ntBASIC5.44□□□□□ -1.54
CIITAP33076 FTH1P11-201ENST00000517577 551 ntBASIC5.44□□□□□ -1.54
CIITAP33076 MAL2-201ENST00000522112 573 ntTSL 4 BASIC5.44□□□□□ -1.54
CIITAP33076 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC5.44□□□□□ -1.54
CIITAP33076 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC5.44□□□□□ -1.54
CIITAP33076 AC133555.2-201ENST00000550213 292 ntBASIC5.44□□□□□ -1.54
CIITAP33076 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC5.44□□□□□ -1.54
CIITAP33076 AC093249.4-201ENST00000564755 259 ntBASIC5.44□□□□□ -1.54
CIITAP33076 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
CIITAP33076 AC068790.7-201ENST00000602347 528 ntBASIC5.44□□□□□ -1.54
CIITAP33076 AC100827.5-201ENST00000615883 426 ntBASIC5.44□□□□□ -1.54
CIITAP33076 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
CIITAP33076 METTL8-218ENST00000638989 876 ntTSL 5 BASIC5.44□□□□□ -1.54
CIITAP33076 METTL8-219ENST00000640734 726 ntTSL 2 BASIC5.44□□□□□ -1.54
CIITAP33076 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
CIITAP33076 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
CIITAP33076 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
CIITAP33076 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
CIITAP33076 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
CIITAP33076 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
CIITAP33076 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC5.44□□□□□ -1.54
CIITAP33076 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC5.44□□□□□ -1.54
CIITAP33076 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
CIITAP33076 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
CIITAP33076 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CIITAP33076 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
CIITAP33076 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
CIITAP33076 MIR16-2-201ENST00000362117 81 ntBASIC5.43□□□□□ -1.54
CIITAP33076 RN7SKP103-201ENST00000363848 320 ntBASIC5.43□□□□□ -1.54
CIITAP33076 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CIITAP33076 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CIITAP33076 OR51B3P-201ENST00000412287 913 ntBASIC5.43□□□□□ -1.54
CIITAP33076 BX664727.1-201ENST00000416024 466 ntBASIC5.43□□□□□ -1.54
CIITAP33076 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC5.43□□□□□ -1.54
CIITAP33076 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC5.43□□□□□ -1.54
CIITAP33076 AC092447.3-201ENST00000426027 686 ntBASIC5.43□□□□□ -1.54
CIITAP33076 AL359265.2-201ENST00000434367 631 ntBASIC5.43□□□□□ -1.54
CIITAP33076 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC5.43□□□□□ -1.54
CIITAP33076 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC5.43□□□□□ -1.54
CIITAP33076 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC5.43□□□□□ -1.54
CIITAP33076 RPL7P33-201ENST00000444159 742 ntBASIC5.43□□□□□ -1.54
CIITAP33076 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC5.43□□□□□ -1.54
CIITAP33076 AL513533.1-201ENST00000453728 415 ntBASIC5.43□□□□□ -1.54
CIITAP33076 RPL5P13-201ENST00000462840 709 ntBASIC5.43□□□□□ -1.54
CIITAP33076 APOA2-207ENST00000470459 416 ntTSL 5 BASIC5.43□□□□□ -1.54
CIITAP33076 AC068587.2-201ENST00000478386 781 ntBASIC5.43□□□□□ -1.54
CIITAP33076 AC021087.2-201ENST00000504656 1203 ntBASIC5.43□□□□□ -1.54
CIITAP33076 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC5.43□□□□□ -1.54
CIITAP33076 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC5.43□□□□□ -1.54
CIITAP33076 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC5.43□□□□□ -1.54
CIITAP33076 OR7E13P-201ENST00000526052 910 ntBASIC5.43□□□□□ -1.54
CIITAP33076 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC5.43□□□□□ -1.54
CIITAP33076 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC5.43□□□□□ -1.54
CIITAP33076 LSM3P2-201ENST00000551246 273 ntBASIC5.43□□□□□ -1.54
CIITAP33076 AC093591.2-201ENST00000565254 3843 ntBASIC5.43□□□□□ -1.54
CIITAP33076 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC5.43□□□□□ -1.54
CIITAP33076 AC023825.1-201ENST00000566704 1030 ntBASIC5.43□□□□□ -1.54
CIITAP33076 AC011492.1-201ENST00000600023 315 ntBASIC5.43□□□□□ -1.54
CIITAP33076 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC5.43□□□□□ -1.54
CIITAP33076 AC140725.3-201ENST00000616193 880 ntBASIC5.43□□□□□ -1.54
CIITAP33076 AC126544.2-201ENST00000625174 749 ntBASIC5.43□□□□□ -1.54
CIITAP33076 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC5.43□□□□□ -1.54
CIITAP33076 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC5.43□□□□□ -1.54
CIITAP33076 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC5.43□□□□□ -1.54
CIITAP33076 HSPD1P14-201ENST00000432666 1618 ntBASIC5.43□□□□□ -1.54
CIITAP33076 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC5.43□□□□□ -1.54
CIITAP33076 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC5.43□□□□□ -1.54
CIITAP33076 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC5.43□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 75.5 ms