Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
PTPN6P29350 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
PTPN6P29350 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
PTPN6P29350 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
PTPN6P29350 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
PTPN6P29350 RN7SKP149-201ENST00000363008 344 ntBASIC4.51□□□□□ -1.69
PTPN6P29350 MIR92A2-201ENST00000385299 75 ntBASIC4.51□□□□□ -1.69
PTPN6P29350 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC4.51□□□□□ -1.69
PTPN6P29350 RBMY2KP-201ENST00000418221 992 ntBASIC4.51□□□□□ -1.69
PTPN6P29350 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC4.51□□□□□ -1.69
PTPN6P29350 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.51□□□□□ -1.69
PTPN6P29350 AC104837.2-201ENST00000427236 424 ntBASIC4.51□□□□□ -1.69
PTPN6P29350 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC4.51□□□□□ -1.69
PTPN6P29350 AC092447.2-201ENST00000435487 669 ntBASIC4.51□□□□□ -1.69
PTPN6P29350 MTND2P21-201ENST00000436242 1042 ntBASIC4.51□□□□□ -1.69
PTPN6P29350 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC4.51□□□□□ -1.69
PTPN6P29350 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC4.51□□□□□ -1.69
PTPN6P29350 AL513343.1-201ENST00000451818 792 ntBASIC4.51□□□□□ -1.69
PTPN6P29350 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC4.51□□□□□ -1.69
PTPN6P29350 RPS3AP53-201ENST00000454716 778 ntBASIC4.51□□□□□ -1.69
PTPN6P29350 AC091685.2-201ENST00000454924 864 ntBASIC4.51□□□□□ -1.69
PTPN6P29350 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC4.51□□□□□ -1.69
PTPN6P29350 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.51□□□□□ -1.69
PTPN6P29350 RNU6-1308P-201ENST00000516817 103 ntBASIC4.51□□□□□ -1.69
PTPN6P29350 HMGB1P46-201ENST00000520062 610 ntBASIC4.51□□□□□ -1.69
PTPN6P29350 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC4.51□□□□□ -1.69
PTPN6P29350 GCSHP4-201ENST00000538792 439 ntBASIC4.51□□□□□ -1.69
PTPN6P29350 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC4.51□□□□□ -1.69
PTPN6P29350 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC4.51□□□□□ -1.69
PTPN6P29350 AC090515.3-201ENST00000560431 315 ntBASIC4.51□□□□□ -1.69
PTPN6P29350 AC009117.1-201ENST00000563948 554 ntBASIC4.51□□□□□ -1.69
PTPN6P29350 MIR4716-201ENST00000579628 84 ntBASIC4.51□□□□□ -1.69
PTPN6P29350 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC4.51□□□□□ -1.69
PTPN6P29350 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC4.51□□□□□ -1.69
PTPN6P29350 AL391834.1-201ENST00000609609 560 ntBASIC4.51□□□□□ -1.69
PTPN6P29350 AC007497.1-201ENST00000610421 561 ntBASIC4.51□□□□□ -1.69
PTPN6P29350 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC4.51□□□□□ -1.69
PTPN6P29350 uc_338.9-201ENST00000617424 182 ntBASIC4.51□□□□□ -1.69
PTPN6P29350 AC139769.3-201ENST00000618383 175 ntBASIC4.51□□□□□ -1.69
PTPN6P29350 AC140113.4-201ENST00000622087 222 ntBASIC4.51□□□□□ -1.69
PTPN6P29350 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC4.51□□□□□ -1.69
PTPN6P29350 LDHA-225ENST00000625635 141 ntTSL 5 BASIC4.51□□□□□ -1.69
PTPN6P29350 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
PTPN6P29350 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
PTPN6P29350 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
PTPN6P29350 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC4.51□□□□□ -1.69
PTPN6P29350 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
PTPN6P29350 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
PTPN6P29350 FTX-210ENST00000603037 8347 ntTSL 5 BASIC4.51□□□□□ -1.69
PTPN6P29350 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
PTPN6P29350 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
PTPN6P29350 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC4.51□□□□□ -1.69
PTPN6P29350 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
PTPN6P29350 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
PTPN6P29350 AP001273.1-201ENST00000624493 3152 ntBASIC4.51□□□□□ -1.69
PTPN6P29350 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC4.5□□□□□ -1.69
PTPN6P29350 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
PTPN6P29350 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.5□□□□□ -1.69
PTPN6P29350 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
PTPN6P29350 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC4.5□□□□□ -1.69
PTPN6P29350 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC4.5□□□□□ -1.69
PTPN6P29350 RN7SKP103-201ENST00000363848 320 ntBASIC4.5□□□□□ -1.69
PTPN6P29350 RNU6-883P-201ENST00000384597 107 ntBASIC4.5□□□□□ -1.69
PTPN6P29350 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC4.5□□□□□ -1.69
PTPN6P29350 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC4.5□□□□□ -1.69
PTPN6P29350 Z74021.1-201ENST00000423610 407 ntBASIC4.5□□□□□ -1.69
PTPN6P29350 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC4.5□□□□□ -1.69
PTPN6P29350 AC009965.2-201ENST00000425328 970 ntBASIC4.5□□□□□ -1.69
PTPN6P29350 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC4.5□□□□□ -1.69
PTPN6P29350 AC073648.4-201ENST00000442655 781 ntBASIC4.5□□□□□ -1.69
PTPN6P29350 AC023512.1-201ENST00000444513 499 ntBASIC4.5□□□□□ -1.69
PTPN6P29350 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC4.5□□□□□ -1.69
PTPN6P29350 AC239809.1-201ENST00000450470 217 ntBASIC4.5□□□□□ -1.69
PTPN6P29350 ATP5A1P7-201ENST00000453978 1279 ntBASIC4.5□□□□□ -1.69
PTPN6P29350 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC4.5□□□□□ -1.69
PTPN6P29350 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC4.5□□□□□ -1.69
PTPN6P29350 AC025181.1-201ENST00000477507 416 ntBASIC4.5□□□□□ -1.69
PTPN6P29350 RPS4XP18-201ENST00000495480 763 ntBASIC4.5□□□□□ -1.69
PTPN6P29350 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC4.5□□□□□ -1.69
PTPN6P29350 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.5□□□□□ -1.69
PTPN6P29350 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC4.5□□□□□ -1.69
PTPN6P29350 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC4.5□□□□□ -1.69
PTPN6P29350 GAPDHP56-201ENST00000506031 988 ntBASIC4.5□□□□□ -1.69
PTPN6P29350 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC4.5□□□□□ -1.69
PTPN6P29350 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC4.5□□□□□ -1.69
PTPN6P29350 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
PTPN6P29350 AC008083.2-201ENST00000546707 476 ntBASIC4.5□□□□□ -1.69
PTPN6P29350 RN7SL802P-201ENST00000577858 299 ntBASIC4.5□□□□□ -1.69
PTPN6P29350 AC005520.3-201ENST00000602874 370 ntBASIC4.5□□□□□ -1.69
PTPN6P29350 AC091979.2-201ENST00000607514 214 ntBASIC4.5□□□□□ -1.69
PTPN6P29350 FAM25E-202ENST00000608562 189 ntBASIC4.5□□□□□ -1.69
PTPN6P29350 AC104307.1-201ENST00000616142 196 ntBASIC4.5□□□□□ -1.69
PTPN6P29350 AC234782.5-201ENST00000617723 324 ntBASIC4.5□□□□□ -1.69
PTPN6P29350 AL359757.1-201ENST00000623176 255 ntBASIC4.5□□□□□ -1.69
PTPN6P29350 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC4.5□□□□□ -1.69
PTPN6P29350 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
PTPN6P29350 MAPK10-320ENST00000641462 6696 ntBASIC4.5□□□□□ -1.69
PTPN6P29350 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
PTPN6P29350 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
PTPN6P29350 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 81.1 ms