Protein–RNA interactions for Protein: P24928

POLR2A, DNA-directed RNA polymerase II subunit RPB1, humanhuman

Known RBP Predictions only

Length 1,970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2AP24928 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC5.68□□□□□ -1.5
POLR2AP24928 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC5.68□□□□□ -1.5
POLR2AP24928 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC5.68□□□□□ -1.5
POLR2AP24928 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC5.68□□□□□ -1.5
POLR2AP24928 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC5.68□□□□□ -1.5
POLR2AP24928 RNU6-709P-201ENST00000517257 104 ntBASIC5.68□□□□□ -1.5
POLR2AP24928 AC092709.1-201ENST00000521355 1045 ntBASIC5.68□□□□□ -1.5
POLR2AP24928 MTCYBP20-201ENST00000524239 1129 ntBASIC5.68□□□□□ -1.5
POLR2AP24928 MED28P5-201ENST00000528254 438 ntBASIC5.68□□□□□ -1.5
POLR2AP24928 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
POLR2AP24928 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC5.68□□□□□ -1.5
POLR2AP24928 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC5.68□□□□□ -1.5
POLR2AP24928 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC5.68□□□□□ -1.5
POLR2AP24928 AC027455.1-201ENST00000574104 594 ntBASIC5.68□□□□□ -1.5
POLR2AP24928 AC010503.3-201ENST00000594355 540 ntBASIC5.68□□□□□ -1.5
POLR2AP24928 PDGFRA-201ENST00000257290 6576 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
POLR2AP24928 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
POLR2AP24928 AC005261.4-201ENST00000600047 1385 ntBASIC5.68□□□□□ -1.5
POLR2AP24928 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
POLR2AP24928 SLC30A6-201ENST00000282587 5089 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
POLR2AP24928 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
POLR2AP24928 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
POLR2AP24928 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC5.68□□□□□ -1.5
POLR2AP24928 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC5.68□□□□□ -1.5
POLR2AP24928 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC5.68□□□□□ -1.5
POLR2AP24928 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC5.68□□□□□ -1.5
POLR2AP24928 AL449283.1-201ENST00000602631 3403 ntBASIC5.68□□□□□ -1.5
POLR2AP24928 CSNK1A1-205ENST00000515435 1856 ntTSL 5 BASIC5.68□□□□□ -1.5
POLR2AP24928 SPEF2-202ENST00000356031 5681 ntAPPRIS P2 TSL 1 (best) BASIC5.68□□□□□ -1.5
POLR2AP24928 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
POLR2AP24928 RNA5SP509-201ENST00000364577 119 ntBASIC5.67□□□□□ -1.5
POLR2AP24928 SNORA48.7-201ENST00000391302 135 ntBASIC5.67□□□□□ -1.5
POLR2AP24928 NPM1P37-201ENST00000403105 874 ntBASIC5.67□□□□□ -1.5
POLR2AP24928 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC5.67□□□□□ -1.5
POLR2AP24928 GAPDHP49-201ENST00000421421 961 ntBASIC5.67□□□□□ -1.5
POLR2AP24928 RPP40P1-201ENST00000426762 456 ntBASIC5.67□□□□□ -1.5
POLR2AP24928 UBE2D3P1-201ENST00000436669 444 ntBASIC5.67□□□□□ -1.5
POLR2AP24928 TDGF1P1-201ENST00000445734 527 ntBASIC5.67□□□□□ -1.5
POLR2AP24928 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC5.67□□□□□ -1.5
POLR2AP24928 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC5.67□□□□□ -1.5
POLR2AP24928 MTCO3P16-201ENST00000454456 754 ntBASIC5.67□□□□□ -1.5
POLR2AP24928 PTGES3P5-201ENST00000455109 434 ntBASIC5.67□□□□□ -1.5
POLR2AP24928 AC008379.1-201ENST00000463655 464 ntBASIC5.67□□□□□ -1.5
POLR2AP24928 MTND3P7-201ENST00000474435 343 ntBASIC5.67□□□□□ -1.5
POLR2AP24928 RPSAP51-201ENST00000497462 645 ntBASIC5.67□□□□□ -1.5
POLR2AP24928 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC5.67□□□□□ -1.5
POLR2AP24928 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC5.67□□□□□ -1.5
POLR2AP24928 MTND1P5-201ENST00000517906 940 ntBASIC5.67□□□□□ -1.5
POLR2AP24928 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC5.67□□□□□ -1.5
POLR2AP24928 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC5.67□□□□□ -1.5
POLR2AP24928 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC5.67□□□□□ -1.5
POLR2AP24928 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC5.67□□□□□ -1.5
POLR2AP24928 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC5.67□□□□□ -1.5
POLR2AP24928 LINC02307-201ENST00000553827 257 ntTSL 3 BASIC5.67□□□□□ -1.5
POLR2AP24928 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC5.67□□□□□ -1.5
POLR2AP24928 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC5.67□□□□□ -1.5
POLR2AP24928 RN7SL176P-201ENST00000580352 264 ntBASIC5.67□□□□□ -1.5
POLR2AP24928 BNIP3P22-201ENST00000593399 556 ntBASIC5.67□□□□□ -1.5
POLR2AP24928 AL133247.2-201ENST00000603236 482 ntBASIC5.67□□□□□ -1.5
POLR2AP24928 AC087468.1-201ENST00000604365 630 ntBASIC5.67□□□□□ -1.5
POLR2AP24928 AP002802.2-201ENST00000605877 235 ntBASIC5.67□□□□□ -1.5
POLR2AP24928 AC107952.2-201ENST00000606048 486 ntBASIC5.67□□□□□ -1.5
POLR2AP24928 AC090246.1-201ENST00000616499 426 ntBASIC5.67□□□□□ -1.5
POLR2AP24928 AL645927.2-201ENST00000618350 349 ntBASIC5.67□□□□□ -1.5
POLR2AP24928 AC093875.1-201ENST00000623688 504 ntBASIC5.67□□□□□ -1.5
POLR2AP24928 MIR492-201ENST00000638676 116 ntBASIC5.67□□□□□ -1.5
POLR2AP24928 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
POLR2AP24928 AC104581.5-201ENST00000624171 7141 ntBASIC5.67□□□□□ -1.5
POLR2AP24928 FLRT3-201ENST00000341420 3971 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
POLR2AP24928 IBTK-201ENST00000306270 6054 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
POLR2AP24928 HEPH-206ENST00000441993 4310 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
POLR2AP24928 DMD-205ENST00000359836 7339 ntTSL 5 BASIC5.67□□□□□ -1.5
POLR2AP24928 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC5.67□□□□□ -1.5
POLR2AP24928 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
POLR2AP24928 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC5.67□□□□□ -1.5
POLR2AP24928 MAPK6PS2-201ENST00000379571 2060 ntBASIC5.67□□□□□ -1.5
POLR2AP24928 MIR16-2-201ENST00000362117 81 ntBASIC5.67□□□□□ -1.5
POLR2AP24928 RNU1-64P-201ENST00000365443 163 ntBASIC5.67□□□□□ -1.5
POLR2AP24928 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
POLR2AP24928 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC5.67□□□□□ -1.5
POLR2AP24928 RNU6-354P-201ENST00000383862 107 ntBASIC5.67□□□□□ -1.5
POLR2AP24928 RNU6-468P-201ENST00000384003 109 ntBASIC5.67□□□□□ -1.5
POLR2AP24928 RNU6-610P-201ENST00000384264 107 ntBASIC5.67□□□□□ -1.5
POLR2AP24928 SNORD116-4-201ENST00000384733 96 ntBASIC5.67□□□□□ -1.5
POLR2AP24928 MIR589-201ENST00000385238 99 ntBASIC5.67□□□□□ -1.5
POLR2AP24928 RPL7P57-201ENST00000423238 740 ntBASIC5.67□□□□□ -1.5
POLR2AP24928 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC5.67□□□□□ -1.5
POLR2AP24928 AL390023.1-201ENST00000428836 262 ntBASIC5.67□□□□□ -1.5
POLR2AP24928 RPS29P17-201ENST00000430795 166 ntBASIC5.67□□□□□ -1.5
POLR2AP24928 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC5.67□□□□□ -1.5
POLR2AP24928 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC5.67□□□□□ -1.5
POLR2AP24928 PPM1AP1-201ENST00000502740 1135 ntBASIC5.67□□□□□ -1.5
POLR2AP24928 AC021087.2-201ENST00000504656 1203 ntBASIC5.67□□□□□ -1.5
POLR2AP24928 AC113420.1-201ENST00000507903 571 ntBASIC5.67□□□□□ -1.5
POLR2AP24928 AC112518.2-201ENST00000508565 425 ntBASIC5.67□□□□□ -1.5
POLR2AP24928 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
POLR2AP24928 SUMO2P19-201ENST00000518920 295 ntBASIC5.67□□□□□ -1.5
POLR2AP24928 NPM1P6-201ENST00000521088 871 ntBASIC5.67□□□□□ -1.5
POLR2AP24928 REXO2-218ENST00000544827 880 ntTSL 3 BASIC5.67□□□□□ -1.5
POLR2AP24928 MTND4P33-201ENST00000556706 766 ntBASIC5.67□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 72 ms