Protein–RNA interactions for Protein: P23763

VAMP1, Vesicle-associated membrane protein 1, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1P23763 IZUMO3-203ENST00000604921 743 ntAPPRIS P2 TSL 5 BASIC5.87□□□□□ -1.47
VAMP1P23763 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC5.87□□□□□ -1.47
VAMP1P23763 AC016394.1-201ENST00000608444 833 ntBASIC5.87□□□□□ -1.47
VAMP1P23763 AL445647.2-201ENST00000615170 130 ntBASIC5.87□□□□□ -1.47
VAMP1P23763 CU638689.2-201ENST00000623809 818 ntBASIC5.87□□□□□ -1.47
VAMP1P23763 CR381572.1-201ENST00000625098 102 ntBASIC5.87□□□□□ -1.47
VAMP1P23763 AC084879.1-201ENST00000636165 1201 ntBASIC5.87□□□□□ -1.47
VAMP1P23763 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
VAMP1P23763 CASC19-248ENST00000641674 1356 ntBASIC5.87□□□□□ -1.47
VAMP1P23763 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC5.87□□□□□ -1.47
VAMP1P23763 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC5.87□□□□□ -1.47
VAMP1P23763 GPR19-201ENST00000332427 1743 ntAPPRIS P1 TSL 4 BASIC5.87□□□□□ -1.47
VAMP1P23763 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC5.87□□□□□ -1.47
VAMP1P23763 PKIA-AS1-202ENST00000522302 2011 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
VAMP1P23763 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC5.87□□□□□ -1.47
VAMP1P23763 NXF2B-205ENST00000618881 3193 ntTSL 2 BASIC5.87□□□□□ -1.47
VAMP1P23763 AC106038.1-201ENST00000501194 3473 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
VAMP1P23763 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
VAMP1P23763 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC5.87□□□□□ -1.47
VAMP1P23763 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC5.86□□□□□ -1.47
VAMP1P23763 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
VAMP1P23763 WDR72-208ENST00000614174 4224 ntTSL 2 BASIC5.86□□□□□ -1.47
VAMP1P23763 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
VAMP1P23763 ZC3H11B-201ENST00000367211 2994 ntAPPRIS P5 TSL 5 BASIC5.86□□□□□ -1.47
VAMP1P23763 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
VAMP1P23763 STK33-201ENST00000315204 2707 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
VAMP1P23763 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC5.86□□□□□ -1.47
VAMP1P23763 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC5.86□□□□□ -1.47
VAMP1P23763 BLOC1S2-206ENST00000618916 2470 ntTSL 5 BASIC5.86□□□□□ -1.47
VAMP1P23763 ZNF90-201ENST00000418063 2310 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
VAMP1P23763 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
VAMP1P23763 HSP90AA5P-201ENST00000438353 2192 ntBASIC5.86□□□□□ -1.47
VAMP1P23763 AC009902.3-201ENST00000606235 2172 ntBASIC5.86□□□□□ -1.47
VAMP1P23763 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
VAMP1P23763 AMY1A-201ENST00000370083 1790 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
VAMP1P23763 FANCL-203ENST00000403295 1576 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
VAMP1P23763 MTCO1P24-201ENST00000515438 1558 ntBASIC5.86□□□□□ -1.47
VAMP1P23763 AC121761.1-201ENST00000547326 1482 ntTSL 3 BASIC5.86□□□□□ -1.47
VAMP1P23763 MTND5P33-201ENST00000571250 1450 ntBASIC5.86□□□□□ -1.47
VAMP1P23763 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
VAMP1P23763 RN7SKP63-201ENST00000363187 301 ntBASIC5.86□□□□□ -1.47
VAMP1P23763 RNU4-59P-201ENST00000364447 116 ntBASIC5.86□□□□□ -1.47
VAMP1P23763 RNA5SP172-201ENST00000365061 118 ntBASIC5.86□□□□□ -1.47
VAMP1P23763 UCMA-201ENST00000378681 826 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
VAMP1P23763 CDC123-202ENST00000378900 933 ntTSL 5 BASIC5.86□□□□□ -1.47
VAMP1P23763 SNORA20.2-201ENST00000383922 131 ntBASIC5.86□□□□□ -1.47
VAMP1P23763 Y_RNA.554-201ENST00000384672 102 ntBASIC5.86□□□□□ -1.47
VAMP1P23763 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
VAMP1P23763 SNORD115-47-201ENST00000391226 86 ntBASIC5.86□□□□□ -1.47
VAMP1P23763 SULT1C2-204ENST00000409880 1206 ntTSL 3 BASIC5.86□□□□□ -1.47
VAMP1P23763 RN7SKP131-201ENST00000410698 301 ntBASIC5.86□□□□□ -1.47
VAMP1P23763 AC245060.4-201ENST00000413293 1121 ntBASIC5.86□□□□□ -1.47
VAMP1P23763 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC5.86□□□□□ -1.47
VAMP1P23763 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC5.86□□□□□ -1.47
VAMP1P23763 RPSAP60-201ENST00000415403 880 ntBASIC5.86□□□□□ -1.47
VAMP1P23763 CELSR3-AS1-201ENST00000421275 196 ntTSL 2 BASIC5.86□□□□□ -1.47
VAMP1P23763 AC137499.1-201ENST00000427602 88 ntBASIC5.86□□□□□ -1.47
VAMP1P23763 AL451136.1-201ENST00000435399 325 ntBASIC5.86□□□□□ -1.47
VAMP1P23763 AL159174.1-201ENST00000438267 811 ntTSL 3 BASIC5.86□□□□□ -1.47
VAMP1P23763 NFIA-AS2-203ENST00000438559 1275 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
VAMP1P23763 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC5.86□□□□□ -1.47
VAMP1P23763 C15orf40-202ENST00000451195 518 ntTSL 3 BASIC5.86□□□□□ -1.47
VAMP1P23763 RGS5-217ENST00000451759 835 ntTSL 3 BASIC5.86□□□□□ -1.47
VAMP1P23763 AC009963.2-201ENST00000453431 138 ntBASIC5.86□□□□□ -1.47
VAMP1P23763 NDUFB11P1-201ENST00000455818 465 ntBASIC5.86□□□□□ -1.47
VAMP1P23763 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC5.86□□□□□ -1.47
VAMP1P23763 C1orf105-204ENST00000460397 462 ntTSL 3 BASIC5.86□□□□□ -1.47
VAMP1P23763 AC093627.1-201ENST00000465755 877 ntTSL 3 BASIC5.86□□□□□ -1.47
VAMP1P23763 AP002884.1-201ENST00000479691 655 ntBASIC5.86□□□□□ -1.47
VAMP1P23763 RPL21P103-201ENST00000479921 488 ntBASIC5.86□□□□□ -1.47
VAMP1P23763 AC023194.1-201ENST00000493084 308 ntBASIC5.86□□□□□ -1.47
VAMP1P23763 PGBD4P4-201ENST00000509673 613 ntBASIC5.86□□□□□ -1.47
VAMP1P23763 OR7E85P-201ENST00000512164 985 ntBASIC5.86□□□□□ -1.47
VAMP1P23763 AC091175.1-201ENST00000522168 572 ntBASIC5.86□□□□□ -1.47
VAMP1P23763 LINC01024-206ENST00000522747 1044 ntTSL 3 BASIC5.86□□□□□ -1.47
VAMP1P23763 AP001994.1-201ENST00000527539 826 ntBASIC5.86□□□□□ -1.47
VAMP1P23763 HAUS8P1-201ENST00000549005 542 ntBASIC5.86□□□□□ -1.47
VAMP1P23763 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC5.86□□□□□ -1.47
VAMP1P23763 AL157955.2-202ENST00000553921 467 ntTSL 3 BASIC5.86□□□□□ -1.47
VAMP1P23763 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC5.86□□□□□ -1.47
VAMP1P23763 BICRA-AS1-201ENST00000598376 547 ntTSL 4 BASIC5.86□□□□□ -1.47
VAMP1P23763 AL365503.1-201ENST00000605247 905 ntBASIC5.86□□□□□ -1.47
VAMP1P23763 Metazoa_SRP.123-201ENST00000616695 286 ntBASIC5.86□□□□□ -1.47
VAMP1P23763 uc_338.21-201ENST00000622458 147 ntBASIC5.86□□□□□ -1.47
VAMP1P23763 AL159972.1-201ENST00000625150 448 ntBASIC5.86□□□□□ -1.47
VAMP1P23763 LMO3-202ENST00000320122 3759 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
VAMP1P23763 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
VAMP1P23763 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
VAMP1P23763 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
VAMP1P23763 FOXP2-201ENST00000350908 2638 ntAPPRIS P2 TSL 1 (best) BASIC5.86□□□□□ -1.47
VAMP1P23763 MYPN-202ENST00000358913 6013 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
VAMP1P23763 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
VAMP1P23763 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC5.86□□□□□ -1.47
VAMP1P23763 AFF2-203ENST00000370457 3952 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
VAMP1P23763 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC5.86□□□□□ -1.47
VAMP1P23763 CLRN1-AS1-201ENST00000465576 2045 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
VAMP1P23763 DOCK11P1-201ENST00000553480 5932 ntBASIC5.86□□□□□ -1.47
VAMP1P23763 ARNTL2-201ENST00000261178 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
VAMP1P23763 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
VAMP1P23763 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC5.85□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 78 ms