Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC6.96□□□□□ -1.29
ERCC3P19447 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC6.96□□□□□ -1.29
ERCC3P19447 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC6.96□□□□□ -1.29
ERCC3P19447 OR13C1P-202ENST00000641378 2919 ntBASIC6.96□□□□□ -1.3
ERCC3P19447 AC006511.3-201ENST00000624929 1783 ntBASIC6.96□□□□□ -1.3
ERCC3P19447 OR2G3-201ENST00000320002 930 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
ERCC3P19447 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
ERCC3P19447 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC6.96□□□□□ -1.3
ERCC3P19447 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC6.96□□□□□ -1.3
ERCC3P19447 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC6.96□□□□□ -1.3
ERCC3P19447 CYP4F30P-202ENST00000420048 405 ntBASIC6.96□□□□□ -1.3
ERCC3P19447 AL049610.1-201ENST00000423374 372 ntBASIC6.96□□□□□ -1.3
ERCC3P19447 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC6.96□□□□□ -1.3
ERCC3P19447 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC6.96□□□□□ -1.3
ERCC3P19447 RPS23P9-201ENST00000448848 438 ntBASIC6.96□□□□□ -1.3
ERCC3P19447 AC016027.4-201ENST00000450866 277 ntBASIC6.96□□□□□ -1.3
ERCC3P19447 AC116337.2-201ENST00000477662 156 ntBASIC6.96□□□□□ -1.3
ERCC3P19447 AC124945.1-201ENST00000485133 188 ntBASIC6.96□□□□□ -1.3
ERCC3P19447 AC010625.1-201ENST00000511296 403 ntBASIC6.96□□□□□ -1.3
ERCC3P19447 RNU6-488P-201ENST00000515918 99 ntBASIC6.96□□□□□ -1.3
ERCC3P19447 RN7SKP96-201ENST00000516948 297 ntBASIC6.96□□□□□ -1.3
ERCC3P19447 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC6.96□□□□□ -1.3
ERCC3P19447 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC6.96□□□□□ -1.3
ERCC3P19447 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC6.96□□□□□ -1.3
ERCC3P19447 OR7K1P-201ENST00000546439 926 ntBASIC6.96□□□□□ -1.3
ERCC3P19447 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC6.96□□□□□ -1.3
ERCC3P19447 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC6.96□□□□□ -1.3
ERCC3P19447 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC6.96□□□□□ -1.3
ERCC3P19447 RNU4ATAC-201ENST00000580972 127 ntBASIC6.96□□□□□ -1.3
ERCC3P19447 AC008759.1-201ENST00000589783 983 ntBASIC6.96□□□□□ -1.3
ERCC3P19447 VN1R92P-201ENST00000598511 928 ntBASIC6.96□□□□□ -1.3
ERCC3P19447 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
ERCC3P19447 TCL6_3.1-201ENST00000619064 137 ntBASIC6.96□□□□□ -1.3
ERCC3P19447 AC231657.1-201ENST00000624313 397 ntBASIC6.96□□□□□ -1.3
ERCC3P19447 AC120349.2-201ENST00000625002 298 ntBASIC6.96□□□□□ -1.3
ERCC3P19447 MYPN-202ENST00000358913 6013 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
ERCC3P19447 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC6.96□□□□□ -1.3
ERCC3P19447 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC6.96□□□□□ -1.3
ERCC3P19447 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC6.96□□□□□ -1.3
ERCC3P19447 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC6.96□□□□□ -1.3
ERCC3P19447 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC6.96□□□□□ -1.3
ERCC3P19447 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
ERCC3P19447 STK3-216ENST00000523601 3107 ntTSL 2 BASIC6.96□□□□□ -1.3
ERCC3P19447 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC6.96□□□□□ -1.3
ERCC3P19447 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
ERCC3P19447 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC6.96□□□□□ -1.3
ERCC3P19447 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC6.96□□□□□ -1.3
ERCC3P19447 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC6.95□□□□□ -1.3
ERCC3P19447 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC6.95□□□□□ -1.3
ERCC3P19447 AC012254.3-201ENST00000591183 2117 ntBASIC6.95□□□□□ -1.3
ERCC3P19447 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC6.95□□□□□ -1.3
ERCC3P19447 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
ERCC3P19447 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC6.95□□□□□ -1.3
ERCC3P19447 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC6.95□□□□□ -1.3
ERCC3P19447 PWAR1-201ENST00000624188 2414 ntBASIC6.95□□□□□ -1.3
ERCC3P19447 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
ERCC3P19447 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
ERCC3P19447 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC6.95□□□□□ -1.3
ERCC3P19447 RPL21P132-201ENST00000331267 462 ntBASIC6.95□□□□□ -1.3
ERCC3P19447 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC6.95□□□□□ -1.3
ERCC3P19447 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC6.95□□□□□ -1.3
ERCC3P19447 RPL23AP29-201ENST00000397284 453 ntBASIC6.95□□□□□ -1.3
ERCC3P19447 Y_RNA.619-201ENST00000410951 90 ntBASIC6.95□□□□□ -1.3
ERCC3P19447 SDHDP6-201ENST00000414693 480 ntBASIC6.95□□□□□ -1.3
ERCC3P19447 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC6.95□□□□□ -1.3
ERCC3P19447 RPS15AP30-201ENST00000420976 390 ntBASIC6.95□□□□□ -1.3
ERCC3P19447 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC6.95□□□□□ -1.3
ERCC3P19447 AC233981.1-201ENST00000423224 461 ntBASIC6.95□□□□□ -1.3
ERCC3P19447 MRPS21P2-201ENST00000424704 264 ntBASIC6.95□□□□□ -1.3
ERCC3P19447 AL121776.1-201ENST00000429337 372 ntBASIC6.95□□□□□ -1.3
ERCC3P19447 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC6.95□□□□□ -1.3
ERCC3P19447 LYPLA1P1-201ENST00000434514 622 ntBASIC6.95□□□□□ -1.3
ERCC3P19447 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC6.95□□□□□ -1.3
ERCC3P19447 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC6.95□□□□□ -1.3
ERCC3P19447 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC6.95□□□□□ -1.3
ERCC3P19447 SNRPGP9-201ENST00000456025 225 ntBASIC6.95□□□□□ -1.3
ERCC3P19447 AC104689.1-201ENST00000473356 768 ntBASIC6.95□□□□□ -1.3
ERCC3P19447 AC114728.1-201ENST00000488289 483 ntBASIC6.95□□□□□ -1.3
ERCC3P19447 AL136038.1-201ENST00000497246 351 ntBASIC6.95□□□□□ -1.3
ERCC3P19447 MTCYBP17-201ENST00000503579 789 ntBASIC6.95□□□□□ -1.3
ERCC3P19447 RNA5SP400-201ENST00000517155 111 ntBASIC6.95□□□□□ -1.3
ERCC3P19447 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC6.95□□□□□ -1.3
ERCC3P19447 AC027309.2-201ENST00000520566 192 ntBASIC6.95□□□□□ -1.3
ERCC3P19447 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC6.95□□□□□ -1.3
ERCC3P19447 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC6.95□□□□□ -1.3
ERCC3P19447 MYL6-213ENST00000549017 502 ntTSL 3 BASIC6.95□□□□□ -1.3
ERCC3P19447 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC6.95□□□□□ -1.3
ERCC3P19447 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC6.95□□□□□ -1.3
ERCC3P19447 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC6.95□□□□□ -1.3
ERCC3P19447 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC6.95□□□□□ -1.3
ERCC3P19447 AC004987.4-201ENST00000603383 338 ntBASIC6.95□□□□□ -1.3
ERCC3P19447 AC239868.4-201ENST00000608318 671 ntBASIC6.95□□□□□ -1.3
ERCC3P19447 MIR6826-201ENST00000617808 98 ntBASIC6.95□□□□□ -1.3
ERCC3P19447 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC6.95□□□□□ -1.3
ERCC3P19447 AC092184.1-201ENST00000625042 715 ntBASIC6.95□□□□□ -1.3
ERCC3P19447 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC6.95□□□□□ -1.3
ERCC3P19447 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC6.95□□□□□ -1.3
ERCC3P19447 AC116667.2-201ENST00000641075 823 ntBASIC6.95□□□□□ -1.3
ERCC3P19447 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC6.95□□□□□ -1.3
ERCC3P19447 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC6.95□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 141.9 ms