Protein–RNA interactions for Protein: P18827

SDC1, Syndecan-1, humanhuman

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1P18827 AC122134.1-201ENST00000565664 1104 ntBASIC4.3□□□□□ -1.72
SDC1P18827 OR1F2P-201ENST00000570470 933 ntBASIC4.3□□□□□ -1.72
SDC1P18827 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.3□□□□□ -1.72
SDC1P18827 AL133338.2-201ENST00000604292 736 ntBASIC4.3□□□□□ -1.72
SDC1P18827 AC005084.1-201ENST00000605160 304 ntBASIC4.3□□□□□ -1.72
SDC1P18827 AL353600.1-201ENST00000608148 251 ntBASIC4.3□□□□□ -1.72
SDC1P18827 AP000894.4-201ENST00000610185 483 ntBASIC4.3□□□□□ -1.72
SDC1P18827 AC023509.5-201ENST00000617434 807 ntBASIC4.3□□□□□ -1.72
SDC1P18827 AL163152.1-201ENST00000642001 374 ntBASIC4.3□□□□□ -1.72
SDC1P18827 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
SDC1P18827 AC125257.1-201ENST00000560400 2930 ntBASIC4.3□□□□□ -1.72
SDC1P18827 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
SDC1P18827 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
SDC1P18827 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
SDC1P18827 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
SDC1P18827 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
SDC1P18827 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
SDC1P18827 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.3□□□□□ -1.72
SDC1P18827 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.29□□□□□ -1.72
SDC1P18827 VN2R3P-201ENST00000422626 1412 ntBASIC4.29□□□□□ -1.72
SDC1P18827 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.29□□□□□ -1.72
SDC1P18827 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
SDC1P18827 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC4.29□□□□□ -1.72
SDC1P18827 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
SDC1P18827 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC4.29□□□□□ -1.72
SDC1P18827 LINC01355-201ENST00000566551 5444 ntBASIC4.29□□□□□ -1.72
SDC1P18827 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.29□□□□□ -1.72
SDC1P18827 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
SDC1P18827 OR14L1P-202ENST00000641545 3009 ntBASIC4.29□□□□□ -1.72
SDC1P18827 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
SDC1P18827 RNA5SP22-201ENST00000365393 109 ntBASIC4.29□□□□□ -1.72
SDC1P18827 AL078604.1-201ENST00000404609 466 ntBASIC4.29□□□□□ -1.72
SDC1P18827 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
SDC1P18827 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
SDC1P18827 BTF3P9-201ENST00000418784 283 ntBASIC4.29□□□□□ -1.72
SDC1P18827 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC4.29□□□□□ -1.72
SDC1P18827 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC4.29□□□□□ -1.72
SDC1P18827 AC104837.2-201ENST00000427236 424 ntBASIC4.29□□□□□ -1.72
SDC1P18827 AP000936.3-201ENST00000438127 255 ntBASIC4.29□□□□□ -1.72
SDC1P18827 RPL23AP93-201ENST00000440847 484 ntBASIC4.29□□□□□ -1.72
SDC1P18827 RPL36AP15-201ENST00000444514 266 ntBASIC4.29□□□□□ -1.72
SDC1P18827 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC4.29□□□□□ -1.72
SDC1P18827 MTND5P8-201ENST00000449817 1083 ntBASIC4.29□□□□□ -1.72
SDC1P18827 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC4.29□□□□□ -1.72
SDC1P18827 AC026348.1-201ENST00000462549 1053 ntBASIC4.29□□□□□ -1.72
SDC1P18827 AC092905.1-201ENST00000467527 949 ntBASIC4.29□□□□□ -1.72
SDC1P18827 RN7SL329P-201ENST00000467740 299 ntBASIC4.29□□□□□ -1.72
SDC1P18827 NIP7P2-201ENST00000485801 544 ntBASIC4.29□□□□□ -1.72
SDC1P18827 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC4.29□□□□□ -1.72
SDC1P18827 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC4.29□□□□□ -1.72
SDC1P18827 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC4.29□□□□□ -1.72
SDC1P18827 AC113430.1-201ENST00000506872 718 ntBASIC4.29□□□□□ -1.72
SDC1P18827 NDUFB5P1-201ENST00000508134 564 ntBASIC4.29□□□□□ -1.72
SDC1P18827 STMN1P2-201ENST00000508435 439 ntBASIC4.29□□□□□ -1.72
SDC1P18827 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.29□□□□□ -1.72
SDC1P18827 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC4.29□□□□□ -1.72
SDC1P18827 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC4.29□□□□□ -1.72
SDC1P18827 MTCYBP19-201ENST00000517463 1124 ntBASIC4.29□□□□□ -1.72
SDC1P18827 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC4.29□□□□□ -1.72
SDC1P18827 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC4.29□□□□□ -1.72
SDC1P18827 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC4.29□□□□□ -1.72
SDC1P18827 AP001922.4-201ENST00000526967 290 ntBASIC4.29□□□□□ -1.72
SDC1P18827 TNFSF11-205ENST00000544862 818 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
SDC1P18827 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.29□□□□□ -1.72
SDC1P18827 AC044860.2-201ENST00000561005 179 ntBASIC4.29□□□□□ -1.72
SDC1P18827 MIR3934-201ENST00000579806 107 ntBASIC4.29□□□□□ -1.72
SDC1P18827 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC4.29□□□□□ -1.72
SDC1P18827 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC4.29□□□□□ -1.72
SDC1P18827 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC4.29□□□□□ -1.72
SDC1P18827 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC4.29□□□□□ -1.72
SDC1P18827 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC4.29□□□□□ -1.72
SDC1P18827 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC4.29□□□□□ -1.72
SDC1P18827 CCT5-215ENST00000625723 135 ntTSL 5 BASIC4.29□□□□□ -1.72
SDC1P18827 TEX41-256ENST00000626411 368 ntTSL 5 BASIC4.29□□□□□ -1.72
SDC1P18827 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.29□□□□□ -1.72
SDC1P18827 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
SDC1P18827 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
SDC1P18827 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
SDC1P18827 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
SDC1P18827 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
SDC1P18827 ARHGAP42P1-201ENST00000507474 1976 ntBASIC4.29□□□□□ -1.72
SDC1P18827 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
SDC1P18827 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.29□□□□□ -1.72
SDC1P18827 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.28□□□□□ -1.72
SDC1P18827 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC4.28□□□□□ -1.72
SDC1P18827 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
SDC1P18827 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
SDC1P18827 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
SDC1P18827 VPS35P1-201ENST00000563400 1518 ntBASIC4.28□□□□□ -1.72
SDC1P18827 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC4.28□□□□□ -1.72
SDC1P18827 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
SDC1P18827 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC4.28□□□□□ -1.72
SDC1P18827 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
SDC1P18827 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
SDC1P18827 RNU6-31P-201ENST00000384388 108 ntBASIC4.28□□□□□ -1.72
SDC1P18827 MIR659-201ENST00000384963 97 ntBASIC4.28□□□□□ -1.72
SDC1P18827 SDHCP2-201ENST00000398565 501 ntBASIC4.28□□□□□ -1.72
SDC1P18827 SNORA74C-2-201ENST00000411179 201 ntBASIC4.28□□□□□ -1.72
SDC1P18827 RPL26P37-201ENST00000411983 438 ntBASIC4.28□□□□□ -1.72
SDC1P18827 CYCSP10-201ENST00000417973 294 ntBASIC4.28□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 149 ms