Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC4.4□□□□□ -1.71
HMGA1P17096 PCBP1-AS1-224ENST00000429599 1045 ntTSL 5 BASIC4.4□□□□□ -1.71
HMGA1P17096 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC4.4□□□□□ -1.71
HMGA1P17096 ABCF2P2-201ENST00000450549 296 ntBASIC4.4□□□□□ -1.71
HMGA1P17096 TPT1P1-201ENST00000458495 518 ntBASIC4.4□□□□□ -1.71
HMGA1P17096 AF213884.1-201ENST00000488102 463 ntBASIC4.4□□□□□ -1.71
HMGA1P17096 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC4.4□□□□□ -1.71
HMGA1P17096 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC4.4□□□□□ -1.71
HMGA1P17096 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC4.4□□□□□ -1.71
HMGA1P17096 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC4.4□□□□□ -1.71
HMGA1P17096 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC4.4□□□□□ -1.71
HMGA1P17096 RGS5-218ENST00000526176 574 ntTSL 4 BASIC4.4□□□□□ -1.71
HMGA1P17096 DYNLL1P4-201ENST00000549314 266 ntBASIC4.4□□□□□ -1.71
HMGA1P17096 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC4.4□□□□□ -1.71
HMGA1P17096 AC093227.2-201ENST00000589357 285 ntBASIC4.4□□□□□ -1.71
HMGA1P17096 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC4.4□□□□□ -1.71
HMGA1P17096 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.4□□□□□ -1.71
HMGA1P17096 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
HMGA1P17096 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.4□□□□□ -1.71
HMGA1P17096 RLIMP1-201ENST00000339626 1680 ntBASIC4.4□□□□□ -1.71
HMGA1P17096 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC4.4□□□□□ -1.71
HMGA1P17096 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
HMGA1P17096 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
HMGA1P17096 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
HMGA1P17096 AC023632.6-201ENST00000624338 2177 ntBASIC4.4□□□□□ -1.71
HMGA1P17096 AC010300.1-201ENST00000600671 5134 ntBASIC4.4□□□□□ -1.71
HMGA1P17096 SLC35F5-213ENST00000638402 1554 ntTSL 5 BASIC4.4□□□□□ -1.71
HMGA1P17096 CA1-225ENST00000626824 2405 ntTSL 5 BASIC4.4□□□□□ -1.71
HMGA1P17096 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC4.39□□□□□ -1.71
HMGA1P17096 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC4.39□□□□□ -1.71
HMGA1P17096 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
HMGA1P17096 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
HMGA1P17096 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
HMGA1P17096 MIR195-201ENST00000385194 87 ntBASIC4.39□□□□□ -1.71
HMGA1P17096 MT-RNR1-201ENST00000389680 954 ntBASIC4.39□□□□□ -1.71
HMGA1P17096 CEACAMP8-201ENST00000413902 580 ntBASIC4.39□□□□□ -1.71
HMGA1P17096 AC009237.10-201ENST00000414112 510 ntBASIC4.39□□□□□ -1.71
HMGA1P17096 AC108032.1-201ENST00000416706 207 ntBASIC4.39□□□□□ -1.71
HMGA1P17096 UBTFL3-201ENST00000418934 1024 ntBASIC4.39□□□□□ -1.71
HMGA1P17096 AL158073.1-201ENST00000426848 1104 ntBASIC4.39□□□□□ -1.71
HMGA1P17096 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC4.39□□□□□ -1.71
HMGA1P17096 RPL21P89-201ENST00000444021 467 ntBASIC4.39□□□□□ -1.71
HMGA1P17096 CDC27P1-201ENST00000445384 715 ntBASIC4.39□□□□□ -1.71
HMGA1P17096 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.39□□□□□ -1.71
HMGA1P17096 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
HMGA1P17096 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC4.39□□□□□ -1.71
HMGA1P17096 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC4.39□□□□□ -1.71
HMGA1P17096 UBTFL6-201ENST00000477929 1024 ntBASIC4.39□□□□□ -1.71
HMGA1P17096 RPS29P19-201ENST00000479709 171 ntBASIC4.39□□□□□ -1.71
HMGA1P17096 IGKV1OR2-1-201ENST00000514060 354 ntBASIC4.39□□□□□ -1.71
HMGA1P17096 AC134698.5-201ENST00000519444 336 ntBASIC4.39□□□□□ -1.71
HMGA1P17096 AC022655.2-201ENST00000577280 318 ntBASIC4.39□□□□□ -1.71
HMGA1P17096 RNU4-89P-201ENST00000607443 133 ntBASIC4.39□□□□□ -1.71
HMGA1P17096 PCA3_2.1-201ENST00000612507 409 ntBASIC4.39□□□□□ -1.71
HMGA1P17096 AC063952.1-203ENST00000634410 658 ntBASIC4.39□□□□□ -1.71
HMGA1P17096 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
HMGA1P17096 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.39□□□□□ -1.71
HMGA1P17096 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.39□□□□□ -1.71
HMGA1P17096 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
HMGA1P17096 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.39□□□□□ -1.71
HMGA1P17096 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
HMGA1P17096 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.38□□□□□ -1.71
HMGA1P17096 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
HMGA1P17096 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.38□□□□□ -1.71
HMGA1P17096 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
HMGA1P17096 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
HMGA1P17096 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
HMGA1P17096 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC4.38□□□□□ -1.71
HMGA1P17096 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC4.38□□□□□ -1.71
HMGA1P17096 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
HMGA1P17096 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
HMGA1P17096 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.38□□□□□ -1.71
HMGA1P17096 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
HMGA1P17096 RNU1-64P-201ENST00000365443 163 ntBASIC4.38□□□□□ -1.71
HMGA1P17096 MIR134-201ENST00000385258 73 ntBASIC4.38□□□□□ -1.71
HMGA1P17096 AC025750.1-201ENST00000399891 379 ntBASIC4.38□□□□□ -1.71
HMGA1P17096 RPL21P65-201ENST00000406094 466 ntBASIC4.38□□□□□ -1.71
HMGA1P17096 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.38□□□□□ -1.71
HMGA1P17096 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.38□□□□□ -1.71
HMGA1P17096 DNAJA1P1-201ENST00000425106 1187 ntBASIC4.38□□□□□ -1.71
HMGA1P17096 AL031767.1-201ENST00000426374 386 ntTSL 5 BASIC4.38□□□□□ -1.71
HMGA1P17096 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC4.38□□□□□ -1.71
HMGA1P17096 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC4.38□□□□□ -1.71
HMGA1P17096 AL606490.8-201ENST00000441624 319 ntBASIC4.38□□□□□ -1.71
HMGA1P17096 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
HMGA1P17096 AL162151.2-201ENST00000448875 158 ntBASIC4.38□□□□□ -1.71
HMGA1P17096 AL589740.1-201ENST00000457513 756 ntTSL 3 BASIC4.38□□□□□ -1.71
HMGA1P17096 RNA5SP103-201ENST00000459503 118 ntBASIC4.38□□□□□ -1.71
HMGA1P17096 RN7SL604P-201ENST00000492589 296 ntBASIC4.38□□□□□ -1.71
HMGA1P17096 BNIP3P41-201ENST00000503774 571 ntBASIC4.38□□□□□ -1.71
HMGA1P17096 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC4.38□□□□□ -1.71
HMGA1P17096 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC4.38□□□□□ -1.71
HMGA1P17096 AC107993.1-201ENST00000591343 684 ntBASIC4.38□□□□□ -1.71
HMGA1P17096 AC022916.3-201ENST00000592961 742 ntBASIC4.38□□□□□ -1.71
HMGA1P17096 AL161637.1-201ENST00000622380 412 ntBASIC4.38□□□□□ -1.71
HMGA1P17096 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC4.38□□□□□ -1.71
HMGA1P17096 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
HMGA1P17096 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC4.38□□□□□ -1.71
HMGA1P17096 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.38□□□□□ -1.71
HMGA1P17096 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 128.3 ms