Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC5.59□□□□□ -1.51
COL5A2P05997 AC016588.2-201ENST00000632484 3021 ntBASIC5.59□□□□□ -1.51
COL5A2P05997 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC5.59□□□□□ -1.51
COL5A2P05997 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC5.59□□□□□ -1.51
COL5A2P05997 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
COL5A2P05997 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC5.59□□□□□ -1.51
COL5A2P05997 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
COL5A2P05997 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC5.59□□□□□ -1.51
COL5A2P05997 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
COL5A2P05997 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC5.59□□□□□ -1.51
COL5A2P05997 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
COL5A2P05997 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
COL5A2P05997 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC5.59□□□□□ -1.52
COL5A2P05997 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC5.58□□□□□ -1.52
COL5A2P05997 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC5.58□□□□□ -1.52
COL5A2P05997 SNORA5.1-201ENST00000384275 131 ntBASIC5.58□□□□□ -1.52
COL5A2P05997 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
COL5A2P05997 AL592291.1-201ENST00000403830 352 ntBASIC5.58□□□□□ -1.52
COL5A2P05997 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC5.58□□□□□ -1.52
COL5A2P05997 RAB9AP3-201ENST00000412737 573 ntBASIC5.58□□□□□ -1.52
COL5A2P05997 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
COL5A2P05997 RAB9AP1-201ENST00000449393 573 ntBASIC5.58□□□□□ -1.52
COL5A2P05997 ATP5G1P3-201ENST00000463301 410 ntBASIC5.58□□□□□ -1.52
COL5A2P05997 RPL7P22-201ENST00000466005 733 ntBASIC5.58□□□□□ -1.52
COL5A2P05997 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC5.58□□□□□ -1.52
COL5A2P05997 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC5.58□□□□□ -1.52
COL5A2P05997 RN7SL435P-201ENST00000584418 282 ntBASIC5.58□□□□□ -1.52
COL5A2P05997 AC006213.4-201ENST00000616184 634 ntBASIC5.58□□□□□ -1.52
COL5A2P05997 AC015908.5-201ENST00000623289 343 ntBASIC5.58□□□□□ -1.52
COL5A2P05997 AC116667.1-201ENST00000604855 2072 ntBASIC5.58□□□□□ -1.52
COL5A2P05997 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC5.58□□□□□ -1.52
COL5A2P05997 GCSAML-210ENST00000536561 4063 ntAPPRIS P3 TSL 4 BASIC5.58□□□□□ -1.52
COL5A2P05997 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC5.58□□□□□ -1.52
COL5A2P05997 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
COL5A2P05997 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
COL5A2P05997 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC5.58□□□□□ -1.52
COL5A2P05997 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC5.58□□□□□ -1.52
COL5A2P05997 SETP4-201ENST00000455717 868 ntBASIC5.58□□□□□ -1.52
COL5A2P05997 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC5.58□□□□□ -1.52
COL5A2P05997 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC5.58□□□□□ -1.52
COL5A2P05997 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC5.58□□□□□ -1.52
COL5A2P05997 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC5.58□□□□□ -1.52
COL5A2P05997 AC012314.7-201ENST00000619693 93 ntBASIC5.58□□□□□ -1.52
COL5A2P05997 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC5.58□□□□□ -1.52
COL5A2P05997 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
COL5A2P05997 AC006042.3-201ENST00000454684 1469 ntBASIC5.57□□□□□ -1.52
COL5A2P05997 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
COL5A2P05997 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
COL5A2P05997 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC5.57□□□□□ -1.52
COL5A2P05997 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC5.57□□□□□ -1.52
COL5A2P05997 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
COL5A2P05997 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
COL5A2P05997 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC5.57□□□□□ -1.52
COL5A2P05997 AC068870.3-201ENST00000625077 2536 ntBASIC5.57□□□□□ -1.52
COL5A2P05997 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC5.57□□□□□ -1.52
COL5A2P05997 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
COL5A2P05997 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
COL5A2P05997 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
COL5A2P05997 ACEA_U3.1-201ENST00000363057 217 ntBASIC5.57□□□□□ -1.52
COL5A2P05997 MIR200C-201ENST00000384980 68 ntBASIC5.57□□□□□ -1.52
COL5A2P05997 TBCAP1-201ENST00000436520 327 ntBASIC5.57□□□□□ -1.52
COL5A2P05997 CYCSP43-201ENST00000438233 310 ntBASIC5.57□□□□□ -1.52
COL5A2P05997 AL157385.1-201ENST00000446973 268 ntBASIC5.57□□□□□ -1.52
COL5A2P05997 AC073486.1-202ENST00000458437 489 ntTSL 3 BASIC5.57□□□□□ -1.52
COL5A2P05997 GAPDHP36-201ENST00000480688 918 ntBASIC5.57□□□□□ -1.52
COL5A2P05997 AC069304.1-201ENST00000491593 704 ntBASIC5.57□□□□□ -1.52
COL5A2P05997 AC006064.5-201ENST00000541782 248 ntBASIC5.57□□□□□ -1.52
COL5A2P05997 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC5.57□□□□□ -1.52
COL5A2P05997 GTF2IP22-201ENST00000554443 182 ntBASIC5.57□□□□□ -1.52
COL5A2P05997 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC5.57□□□□□ -1.52
COL5A2P05997 AC087499.8-201ENST00000578406 226 ntBASIC5.57□□□□□ -1.52
COL5A2P05997 MIR3908-201ENST00000579798 126 ntBASIC5.57□□□□□ -1.52
COL5A2P05997 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC5.57□□□□□ -1.52
COL5A2P05997 AC010487.1-201ENST00000594408 1172 ntBASIC5.57□□□□□ -1.52
COL5A2P05997 AC091953.5-201ENST00000622919 233 ntBASIC5.57□□□□□ -1.52
COL5A2P05997 AC091905.2-201ENST00000623143 306 ntBASIC5.57□□□□□ -1.52
COL5A2P05997 AC020978.9-201ENST00000624380 1141 ntBASIC5.57□□□□□ -1.52
COL5A2P05997 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
COL5A2P05997 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
COL5A2P05997 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
COL5A2P05997 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
COL5A2P05997 AC006971.1-201ENST00000407916 4486 ntBASIC5.56□□□□□ -1.52
COL5A2P05997 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
COL5A2P05997 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
COL5A2P05997 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
COL5A2P05997 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
COL5A2P05997 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
COL5A2P05997 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
COL5A2P05997 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
COL5A2P05997 RNU6-213P-201ENST00000384051 104 ntBASIC5.56□□□□□ -1.52
COL5A2P05997 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC5.56□□□□□ -1.52
COL5A2P05997 HSPE1P12-201ENST00000412576 301 ntBASIC5.56□□□□□ -1.52
COL5A2P05997 EIF1P3-201ENST00000423841 334 ntBASIC5.56□□□□□ -1.52
COL5A2P05997 AC091286.1-201ENST00000431233 461 ntBASIC5.56□□□□□ -1.52
COL5A2P05997 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC5.56□□□□□ -1.52
COL5A2P05997 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC5.56□□□□□ -1.52
COL5A2P05997 AC009963.4-201ENST00000448535 339 ntBASIC5.56□□□□□ -1.52
COL5A2P05997 AC110792.1-201ENST00000491826 472 ntBASIC5.56□□□□□ -1.52
COL5A2P05997 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC5.56□□□□□ -1.52
COL5A2P05997 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC5.56□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms