Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC4.32□□□□□ -1.72
HLA-DQB2P05538 MTND6P33-201ENST00000571794 183 ntBASIC4.32□□□□□ -1.72
HLA-DQB2P05538 AL121834.1-201ENST00000572284 509 ntBASIC4.32□□□□□ -1.72
HLA-DQB2P05538 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC4.32□□□□□ -1.72
HLA-DQB2P05538 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC4.32□□□□□ -1.72
HLA-DQB2P05538 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC4.32□□□□□ -1.72
HLA-DQB2P05538 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC4.32□□□□□ -1.72
HLA-DQB2P05538 AP000843.1-201ENST00000624880 701 ntBASIC4.32□□□□□ -1.72
HLA-DQB2P05538 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC4.32□□□□□ -1.72
HLA-DQB2P05538 IPO5-229ENST00000631030 192 ntTSL 5 BASIC4.32□□□□□ -1.72
HLA-DQB2P05538 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC4.32□□□□□ -1.72
HLA-DQB2P05538 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC4.32□□□□□ -1.72
HLA-DQB2P05538 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
HLA-DQB2P05538 MAPK10-304ENST00000641341 3984 ntBASIC4.32□□□□□ -1.72
HLA-DQB2P05538 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC4.32□□□□□ -1.72
HLA-DQB2P05538 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
HLA-DQB2P05538 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
HLA-DQB2P05538 VPS35P1-201ENST00000563400 1518 ntBASIC4.31□□□□□ -1.72
HLA-DQB2P05538 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
HLA-DQB2P05538 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.31□□□□□ -1.72
HLA-DQB2P05538 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
HLA-DQB2P05538 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC4.31□□□□□ -1.72
HLA-DQB2P05538 BTBD10P1-201ENST00000549824 1352 ntBASIC4.31□□□□□ -1.72
HLA-DQB2P05538 FAM3C2-201ENST00000312214 681 ntBASIC4.31□□□□□ -1.72
HLA-DQB2P05538 RPL6P29-201ENST00000414863 865 ntBASIC4.31□□□□□ -1.72
HLA-DQB2P05538 P2RY10P2-201ENST00000416730 913 ntBASIC4.31□□□□□ -1.72
HLA-DQB2P05538 AC092447.2-201ENST00000435487 669 ntBASIC4.31□□□□□ -1.72
HLA-DQB2P05538 ACTR3P2-201ENST00000439585 1257 ntBASIC4.31□□□□□ -1.72
HLA-DQB2P05538 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC4.31□□□□□ -1.72
HLA-DQB2P05538 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC4.31□□□□□ -1.72
HLA-DQB2P05538 RN7SL303P-201ENST00000469773 251 ntBASIC4.31□□□□□ -1.72
HLA-DQB2P05538 RPL21P6-201ENST00000479171 504 ntBASIC4.31□□□□□ -1.72
HLA-DQB2P05538 AL592156.1-201ENST00000508758 304 ntBASIC4.31□□□□□ -1.72
HLA-DQB2P05538 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC4.31□□□□□ -1.72
HLA-DQB2P05538 HMGB1P19-201ENST00000517578 577 ntBASIC4.31□□□□□ -1.72
HLA-DQB2P05538 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC4.31□□□□□ -1.72
HLA-DQB2P05538 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC4.31□□□□□ -1.72
HLA-DQB2P05538 PSMB7P1-201ENST00000556349 514 ntBASIC4.31□□□□□ -1.72
HLA-DQB2P05538 AC124068.1-201ENST00000563131 678 ntBASIC4.31□□□□□ -1.72
HLA-DQB2P05538 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC4.31□□□□□ -1.72
HLA-DQB2P05538 AL031666.3-201ENST00000609320 1006 ntBASIC4.31□□□□□ -1.72
HLA-DQB2P05538 MIR6748-201ENST00000610433 71 ntBASIC4.31□□□□□ -1.72
HLA-DQB2P05538 FAM27D1-201ENST00000612308 341 ntBASIC4.31□□□□□ -1.72
HLA-DQB2P05538 AC114781.5-201ENST00000615297 108 ntBASIC4.31□□□□□ -1.72
HLA-DQB2P05538 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
HLA-DQB2P05538 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
HLA-DQB2P05538 AK3-201ENST00000359883 1536 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
HLA-DQB2P05538 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
HLA-DQB2P05538 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
HLA-DQB2P05538 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
HLA-DQB2P05538 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
HLA-DQB2P05538 Z95327.2-201ENST00000414579 1873 ntBASIC4.3□□□□□ -1.72
HLA-DQB2P05538 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
HLA-DQB2P05538 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.3□□□□□ -1.72
HLA-DQB2P05538 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
HLA-DQB2P05538 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
HLA-DQB2P05538 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
HLA-DQB2P05538 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
HLA-DQB2P05538 AC126755.2-208ENST00000327792 462 ntBASIC4.3□□□□□ -1.72
HLA-DQB2P05538 AC138969.1-213ENST00000331436 462 ntBASIC4.3□□□□□ -1.72
HLA-DQB2P05538 VDAC2P1-201ENST00000399358 958 ntBASIC4.3□□□□□ -1.72
HLA-DQB2P05538 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4.3□□□□□ -1.72
HLA-DQB2P05538 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC4.3□□□□□ -1.72
HLA-DQB2P05538 HLA-N-201ENST00000437516 135 ntBASIC4.3□□□□□ -1.72
HLA-DQB2P05538 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC4.3□□□□□ -1.72
HLA-DQB2P05538 RPS29P19-201ENST00000479709 171 ntBASIC4.3□□□□□ -1.72
HLA-DQB2P05538 AC104126.1-201ENST00000504004 711 ntTSL 3 BASIC4.3□□□□□ -1.72
HLA-DQB2P05538 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC4.3□□□□□ -1.72
HLA-DQB2P05538 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC4.3□□□□□ -1.72
HLA-DQB2P05538 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC4.3□□□□□ -1.72
HLA-DQB2P05538 EIF4A2P1-201ENST00000587313 1063 ntBASIC4.3□□□□□ -1.72
HLA-DQB2P05538 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC4.3□□□□□ -1.72
HLA-DQB2P05538 AL353600.1-201ENST00000608148 251 ntBASIC4.3□□□□□ -1.72
HLA-DQB2P05538 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC4.3□□□□□ -1.72
HLA-DQB2P05538 AL669942.2-201ENST00000620352 697 ntBASIC4.3□□□□□ -1.72
HLA-DQB2P05538 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC4.3□□□□□ -1.72
HLA-DQB2P05538 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
HLA-DQB2P05538 CDC27P2-201ENST00000425026 1922 ntBASIC4.3□□□□□ -1.72
HLA-DQB2P05538 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.3□□□□□ -1.72
HLA-DQB2P05538 DPY19L2P2-203ENST00000435536 1858 ntBASIC4.3□□□□□ -1.72
HLA-DQB2P05538 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
HLA-DQB2P05538 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
HLA-DQB2P05538 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
HLA-DQB2P05538 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.29□□□□□ -1.72
HLA-DQB2P05538 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.29□□□□□ -1.72
HLA-DQB2P05538 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
HLA-DQB2P05538 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
HLA-DQB2P05538 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
HLA-DQB2P05538 AL161909.1-201ENST00000397390 712 ntBASIC4.29□□□□□ -1.72
HLA-DQB2P05538 SEPT7P2-202ENST00000398921 823 ntBASIC4.29□□□□□ -1.72
HLA-DQB2P05538 MIR1179-201ENST00000408703 91 ntBASIC4.29□□□□□ -1.72
HLA-DQB2P05538 GSTM3P2-201ENST00000412746 530 ntBASIC4.29□□□□□ -1.72
HLA-DQB2P05538 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC4.29□□□□□ -1.72
HLA-DQB2P05538 CHIAP3-201ENST00000423668 1133 ntBASIC4.29□□□□□ -1.72
HLA-DQB2P05538 DYNLL1P7-201ENST00000429273 258 ntBASIC4.29□□□□□ -1.72
HLA-DQB2P05538 AC073143.1-201ENST00000436316 395 ntBASIC4.29□□□□□ -1.72
HLA-DQB2P05538 AC009963.2-201ENST00000453431 138 ntBASIC4.29□□□□□ -1.72
HLA-DQB2P05538 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
HLA-DQB2P05538 AP000942.1-201ENST00000463969 747 ntBASIC4.29□□□□□ -1.72
HLA-DQB2P05538 AK5-208ENST00000478255 556 ntTSL 2 BASIC4.29□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 74.9 ms