Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC4.03□□□□□ -1.76
SPTA1P02549 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.77
SPTA1P02549 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC4.03□□□□□ -1.77
SPTA1P02549 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC4.03□□□□□ -1.77
SPTA1P02549 ANLN-202ENST00000396068 4661 ntTSL 1 (best) BASIC4.03□□□□□ -1.77
SPTA1P02549 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC4.02□□□□□ -1.77
SPTA1P02549 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC4.02□□□□□ -1.77
SPTA1P02549 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
SPTA1P02549 OR7A10-201ENST00000248058 930 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
SPTA1P02549 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
SPTA1P02549 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC4.02□□□□□ -1.77
SPTA1P02549 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC4.02□□□□□ -1.77
SPTA1P02549 SOD1P3-201ENST00000518682 454 ntBASIC4.02□□□□□ -1.77
SPTA1P02549 AC092709.1-201ENST00000521355 1045 ntBASIC4.02□□□□□ -1.77
SPTA1P02549 GTF2IP8-201ENST00000560687 584 ntBASIC4.02□□□□□ -1.77
SPTA1P02549 AC027228.2-201ENST00000567141 2154 ntBASIC4.02□□□□□ -1.77
SPTA1P02549 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC4.02□□□□□ -1.77
SPTA1P02549 AL606490.9-201ENST00000603331 271 ntBASIC4.02□□□□□ -1.77
SPTA1P02549 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC4.02□□□□□ -1.77
SPTA1P02549 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC4.02□□□□□ -1.77
SPTA1P02549 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC4.02□□□□□ -1.77
SPTA1P02549 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC4.02□□□□□ -1.77
SPTA1P02549 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC4.02□□□□□ -1.77
SPTA1P02549 AL672167.1-203ENST00000641299 2975 ntBASIC4.02□□□□□ -1.77
SPTA1P02549 SMG1P6-201ENST00000532337 2930 ntBASIC4.02□□□□□ -1.77
SPTA1P02549 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
SPTA1P02549 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
SPTA1P02549 OR1L4-201ENST00000259466 936 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
SPTA1P02549 RNA5SP130-201ENST00000364431 114 ntBASIC4.02□□□□□ -1.77
SPTA1P02549 OR2B3-201ENST00000377173 1106 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
SPTA1P02549 MIR3065-201ENST00000390137 79 ntBASIC4.02□□□□□ -1.77
SPTA1P02549 AL122016.1-201ENST00000403365 367 ntBASIC4.02□□□□□ -1.77
SPTA1P02549 MIR1289-1-201ENST00000408836 144 ntBASIC4.02□□□□□ -1.77
SPTA1P02549 TPT1P2-201ENST00000413105 503 ntBASIC4.02□□□□□ -1.77
SPTA1P02549 RGS17P1-201ENST00000423358 553 ntBASIC4.02□□□□□ -1.77
SPTA1P02549 AC090142.1-201ENST00000465776 462 ntBASIC4.02□□□□□ -1.77
SPTA1P02549 AC007688.1-201ENST00000475592 759 ntBASIC4.02□□□□□ -1.77
SPTA1P02549 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC4.02□□□□□ -1.77
SPTA1P02549 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
SPTA1P02549 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
SPTA1P02549 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
SPTA1P02549 AL121839.2-201ENST00000565058 6943 ntBASIC4.01□□□□□ -1.77
SPTA1P02549 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
SPTA1P02549 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.01□□□□□ -1.77
SPTA1P02549 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC4.01□□□□□ -1.77
SPTA1P02549 SNORA73.2-201ENST00000364946 201 ntBASIC4.01□□□□□ -1.77
SPTA1P02549 CTSL3P-202ENST00000412179 788 ntBASIC4.01□□□□□ -1.77
SPTA1P02549 RPL6P29-201ENST00000414863 865 ntBASIC4.01□□□□□ -1.77
SPTA1P02549 NOTCH2P1-201ENST00000443481 624 ntBASIC4.01□□□□□ -1.77
SPTA1P02549 AC104763.1-201ENST00000475274 360 ntBASIC4.01□□□□□ -1.77
SPTA1P02549 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC4.01□□□□□ -1.77
SPTA1P02549 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC4.01□□□□□ -1.77
SPTA1P02549 AP001381.1-201ENST00000584109 534 ntTSL 5 BASIC4.01□□□□□ -1.77
SPTA1P02549 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC4.01□□□□□ -1.77
SPTA1P02549 IGKV2OR2-2-201ENST00000605025 300 ntBASIC4.01□□□□□ -1.77
SPTA1P02549 FAM27D1-201ENST00000612308 341 ntBASIC4.01□□□□□ -1.77
SPTA1P02549 AC007546.1-201ENST00000619452 559 ntBASIC4.01□□□□□ -1.77
SPTA1P02549 AL354798.1-201ENST00000622505 329 ntBASIC4.01□□□□□ -1.77
SPTA1P02549 TEX41-265ENST00000627785 704 ntTSL 5 BASIC4.01□□□□□ -1.77
SPTA1P02549 TEX41-280ENST00000629185 591 ntTSL 5 BASIC4.01□□□□□ -1.77
SPTA1P02549 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.01□□□□□ -1.77
SPTA1P02549 STK3-216ENST00000523601 3107 ntTSL 2 BASIC4.01□□□□□ -1.77
SPTA1P02549 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
SPTA1P02549 LRRFIP2-201ENST00000336686 3208 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
SPTA1P02549 AC073342.2-201ENST00000595842 1800 ntBASIC4.01□□□□□ -1.77
SPTA1P02549 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
SPTA1P02549 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC4.01□□□□□ -1.77
SPTA1P02549 OR4K6P-201ENST00000416478 897 ntBASIC4.01□□□□□ -1.77
SPTA1P02549 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC4.01□□□□□ -1.77
SPTA1P02549 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC4.01□□□□□ -1.77
SPTA1P02549 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC4.01□□□□□ -1.77
SPTA1P02549 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC4.01□□□□□ -1.77
SPTA1P02549 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC4.01□□□□□ -1.77
SPTA1P02549 AC011815.3-201ENST00000624194 473 ntBASIC4.01□□□□□ -1.77
SPTA1P02549 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
SPTA1P02549 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
SPTA1P02549 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC4□□□□□ -1.77
SPTA1P02549 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC4□□□□□ -1.77
SPTA1P02549 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC4□□□□□ -1.77
SPTA1P02549 AC007382.1-201ENST00000624376 2618 ntBASIC4□□□□□ -1.77
SPTA1P02549 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
SPTA1P02549 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC4□□□□□ -1.77
SPTA1P02549 AC093166.2-201ENST00000455969 1017 ntBASIC4□□□□□ -1.77
SPTA1P02549 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC4□□□□□ -1.77
SPTA1P02549 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC4□□□□□ -1.77
SPTA1P02549 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC4□□□□□ -1.77
SPTA1P02549 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC4□□□□□ -1.77
SPTA1P02549 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4□□□□□ -1.77
SPTA1P02549 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC4□□□□□ -1.77
SPTA1P02549 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC4□□□□□ -1.77
SPTA1P02549 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC4□□□□□ -1.77
SPTA1P02549 CAST-202ENST00000325674 3356 ntTSL 5 BASIC4□□□□□ -1.77
SPTA1P02549 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
SPTA1P02549 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC4□□□□□ -1.77
SPTA1P02549 ICE2P1-201ENST00000512800 1849 ntBASIC4□□□□□ -1.77
SPTA1P02549 AL445584.1-201ENST00000431451 330 ntBASIC4□□□□□ -1.77
SPTA1P02549 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC4□□□□□ -1.77
SPTA1P02549 AC097486.1-201ENST00000515331 210 ntBASIC4□□□□□ -1.77
SPTA1P02549 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC4□□□□□ -1.77
SPTA1P02549 AC092354.2-201ENST00000607786 514 ntBASIC4□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 85.3 ms