Protein–RNA interactions for Protein: P02462

COL4A1, Collagen alpha-1(IV) chain, humanhuman

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1P02462 C2orf16-201ENST00000408964 6200 ntAPPRIS P2 BASIC5.05□□□□□ -1.6
COL4A1P02462 RNA5SP399-201ENST00000364003 117 ntBASIC5.05□□□□□ -1.6
COL4A1P02462 HMGB3P5-201ENST00000428894 612 ntBASIC5.05□□□□□ -1.6
COL4A1P02462 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
COL4A1P02462 NOTCH2P1-201ENST00000443481 624 ntBASIC5.05□□□□□ -1.6
COL4A1P02462 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
COL4A1P02462 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC5.05□□□□□ -1.6
COL4A1P02462 EIF4A2P1-201ENST00000587313 1063 ntBASIC5.05□□□□□ -1.6
COL4A1P02462 AC016229.2-201ENST00000591331 417 ntTSL 2 BASIC5.05□□□□□ -1.6
COL4A1P02462 EOGT-210ENST00000615922 1931 ntBASIC5.05□□□□□ -1.6
COL4A1P02462 AC022106.2-201ENST00000620114 757 ntBASIC5.05□□□□□ -1.6
COL4A1P02462 AC073530.2-201ENST00000623987 261 ntBASIC5.05□□□□□ -1.6
COL4A1P02462 NAP1L1-227ENST00000618691 13505 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
COL4A1P02462 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
COL4A1P02462 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
COL4A1P02462 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC5.04□□□□□ -1.6
COL4A1P02462 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
COL4A1P02462 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
COL4A1P02462 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
COL4A1P02462 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
COL4A1P02462 CACNA1E-210ENST00000621791 16171 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
COL4A1P02462 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
COL4A1P02462 AC092162.3-201ENST00000624511 1624 ntBASIC5.04□□□□□ -1.6
COL4A1P02462 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
COL4A1P02462 LINC01013-205ENST00000458028 1345 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
COL4A1P02462 RNA5SP387-201ENST00000364226 106 ntBASIC5.04□□□□□ -1.6
COL4A1P02462 RN7SKP186-201ENST00000365371 303 ntBASIC5.04□□□□□ -1.6
COL4A1P02462 AC018644.1-201ENST00000429934 551 ntBASIC5.04□□□□□ -1.6
COL4A1P02462 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC5.04□□□□□ -1.6
COL4A1P02462 AL157884.3-201ENST00000448273 1184 ntBASIC5.04□□□□□ -1.6
COL4A1P02462 RPL36AP13-201ENST00000457490 317 ntBASIC5.04□□□□□ -1.6
COL4A1P02462 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC5.04□□□□□ -1.6
COL4A1P02462 SNRPCP3-201ENST00000474888 476 ntBASIC5.04□□□□□ -1.6
COL4A1P02462 HPRT1P2-201ENST00000505250 544 ntBASIC5.04□□□□□ -1.6
COL4A1P02462 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC5.04□□□□□ -1.6
COL4A1P02462 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC5.04□□□□□ -1.6
COL4A1P02462 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC5.04□□□□□ -1.6
COL4A1P02462 MIR5685-201ENST00000579080 79 ntBASIC5.04□□□□□ -1.6
COL4A1P02462 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC5.04□□□□□ -1.6
COL4A1P02462 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
COL4A1P02462 PUS10-201ENST00000316752 2278 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
COL4A1P02462 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
COL4A1P02462 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC5.04□□□□□ -1.6
COL4A1P02462 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC5.04□□□□□ -1.6
COL4A1P02462 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
COL4A1P02462 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
COL4A1P02462 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
COL4A1P02462 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC5.04□□□□□ -1.6
COL4A1P02462 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC5.03□□□□□ -1.6
COL4A1P02462 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
COL4A1P02462 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
COL4A1P02462 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC5.03□□□□□ -1.6
COL4A1P02462 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
COL4A1P02462 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC5.03□□□□□ -1.6
COL4A1P02462 CYCSP28-201ENST00000534284 321 ntBASIC5.03□□□□□ -1.6
COL4A1P02462 HSPE1P5-201ENST00000561489 272 ntBASIC5.03□□□□□ -1.6
COL4A1P02462 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
COL4A1P02462 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC5.03□□□□□ -1.6
COL4A1P02462 AC021242.1-201ENST00000507315 2035 ntBASIC5.03□□□□□ -1.6
COL4A1P02462 AP000432.2-201ENST00000624164 2048 ntBASIC5.03□□□□□ -1.6
COL4A1P02462 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
COL4A1P02462 RNA5SP22-201ENST00000365393 109 ntBASIC5.02□□□□□ -1.61
COL4A1P02462 MIR1271-201ENST00000408537 86 ntBASIC5.02□□□□□ -1.61
COL4A1P02462 MIR1179-201ENST00000408703 91 ntBASIC5.02□□□□□ -1.61
COL4A1P02462 AC091286.1-201ENST00000431233 461 ntBASIC5.02□□□□□ -1.61
COL4A1P02462 AC007389.2-201ENST00000434630 306 ntBASIC5.02□□□□□ -1.61
COL4A1P02462 RPS26P2-201ENST00000440331 348 ntBASIC5.02□□□□□ -1.61
COL4A1P02462 AC112206.1-201ENST00000468416 477 ntBASIC5.02□□□□□ -1.61
COL4A1P02462 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC5.02□□□□□ -1.61
COL4A1P02462 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
COL4A1P02462 OSBPL9P2-201ENST00000526582 1228 ntBASIC5.02□□□□□ -1.61
COL4A1P02462 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC5.02□□□□□ -1.61
COL4A1P02462 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC5.02□□□□□ -1.61
COL4A1P02462 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC5.02□□□□□ -1.61
COL4A1P02462 AL592436.1-201ENST00000605135 558 ntBASIC5.02□□□□□ -1.61
COL4A1P02462 CR392039.5-201ENST00000623201 510 ntBASIC5.02□□□□□ -1.61
COL4A1P02462 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC5.02□□□□□ -1.61
COL4A1P02462 SRSF11-202ENST00000370950 3784 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
COL4A1P02462 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
COL4A1P02462 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
COL4A1P02462 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC5.02□□□□□ -1.61
COL4A1P02462 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
COL4A1P02462 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
COL4A1P02462 FLG-201ENST00000368799 12747 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
COL4A1P02462 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
COL4A1P02462 AC005005.4-201ENST00000623789 16698 ntBASIC5.02□□□□□ -1.61
COL4A1P02462 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
COL4A1P02462 SNORA63.1-201ENST00000362493 131 ntBASIC5.02□□□□□ -1.61
COL4A1P02462 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC5.02□□□□□ -1.61
COL4A1P02462 RAB9AP3-201ENST00000412737 573 ntBASIC5.02□□□□□ -1.61
COL4A1P02462 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC5.02□□□□□ -1.61
COL4A1P02462 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC5.02□□□□□ -1.61
COL4A1P02462 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC5.02□□□□□ -1.61
COL4A1P02462 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC5.02□□□□□ -1.61
COL4A1P02462 RAB9AP1-201ENST00000449393 573 ntBASIC5.02□□□□□ -1.61
COL4A1P02462 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC5.02□□□□□ -1.61
COL4A1P02462 RPL38P1-201ENST00000460914 211 ntBASIC5.02□□□□□ -1.61
COL4A1P02462 AC090602.1-201ENST00000469695 252 ntBASIC5.02□□□□□ -1.61
COL4A1P02462 RPS3AP6-201ENST00000484430 795 ntBASIC5.02□□□□□ -1.61
COL4A1P02462 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 110.7 ms