Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
LDLRP01130 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.83□□□□□ -1.64
LDLRP01130 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
LDLRP01130 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC4.83□□□□□ -1.64
LDLRP01130 MTCO1P4-201ENST00000520516 1409 ntBASIC4.83□□□□□ -1.64
LDLRP01130 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
LDLRP01130 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
LDLRP01130 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC4.83□□□□□ -1.64
LDLRP01130 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
LDLRP01130 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
LDLRP01130 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC4.83□□□□□ -1.64
LDLRP01130 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC4.83□□□□□ -1.64
LDLRP01130 AL158050.1-201ENST00000416077 457 ntBASIC4.83□□□□□ -1.64
LDLRP01130 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC4.83□□□□□ -1.64
LDLRP01130 EIF4A1P1-201ENST00000420241 934 ntBASIC4.83□□□□□ -1.64
LDLRP01130 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC4.83□□□□□ -1.64
LDLRP01130 VN1R42P-201ENST00000424651 344 ntBASIC4.83□□□□□ -1.64
LDLRP01130 AL160175.1-201ENST00000428124 247 ntBASIC4.83□□□□□ -1.64
LDLRP01130 TEX41-205ENST00000431734 529 ntTSL 4 BASIC4.83□□□□□ -1.64
LDLRP01130 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC4.83□□□□□ -1.64
LDLRP01130 AL645638.1-201ENST00000440519 361 ntBASIC4.83□□□□□ -1.64
LDLRP01130 MTCYBP12-201ENST00000440559 1134 ntBASIC4.83□□□□□ -1.64
LDLRP01130 AC023512.1-201ENST00000444513 499 ntBASIC4.83□□□□□ -1.64
LDLRP01130 HMGB1P5-202ENST00000451497 985 ntBASIC4.83□□□□□ -1.64
LDLRP01130 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC4.83□□□□□ -1.64
LDLRP01130 RPL32P14-201ENST00000463196 378 ntBASIC4.83□□□□□ -1.64
LDLRP01130 AC090686.1-201ENST00000481577 749 ntBASIC4.83□□□□□ -1.64
LDLRP01130 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC4.83□□□□□ -1.64
LDLRP01130 AC107398.1-201ENST00000486904 505 ntBASIC4.83□□□□□ -1.64
LDLRP01130 AC008897.1-201ENST00000494006 347 ntBASIC4.83□□□□□ -1.64
LDLRP01130 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC4.83□□□□□ -1.64
LDLRP01130 MTATP6P9-201ENST00000515039 680 ntBASIC4.83□□□□□ -1.64
LDLRP01130 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC4.83□□□□□ -1.64
LDLRP01130 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC4.83□□□□□ -1.64
LDLRP01130 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
LDLRP01130 EDDM3DP-201ENST00000554692 434 ntBASIC4.83□□□□□ -1.64
LDLRP01130 SULT1C2P2-201ENST00000562517 294 ntBASIC4.83□□□□□ -1.64
LDLRP01130 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
LDLRP01130 AC006116.7-201ENST00000590141 756 ntBASIC4.83□□□□□ -1.64
LDLRP01130 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC4.83□□□□□ -1.64
LDLRP01130 AC025175.1-201ENST00000606482 759 ntBASIC4.83□□□□□ -1.64
LDLRP01130 AP001033.2-201ENST00000609701 1003 ntBASIC4.83□□□□□ -1.64
LDLRP01130 AC099494.2-201ENST00000623371 978 ntBASIC4.83□□□□□ -1.64
LDLRP01130 AC091905.4-201ENST00000623432 202 ntBASIC4.83□□□□□ -1.64
LDLRP01130 AC010872.1-201ENST00000624225 675 ntBASIC4.83□□□□□ -1.64
LDLRP01130 AC139713.2-215ENST00000641428 5037 ntBASIC4.83□□□□□ -1.64
LDLRP01130 AC107027.3-201ENST00000565095 3473 ntBASIC4.83□□□□□ -1.64
LDLRP01130 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC4.83□□□□□ -1.64
LDLRP01130 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.83□□□□□ -1.64
LDLRP01130 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC4.82□□□□□ -1.64
LDLRP01130 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
LDLRP01130 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC4.82□□□□□ -1.64
LDLRP01130 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
LDLRP01130 ALB-219ENST00000621085 1418 ntTSL 5 BASIC4.82□□□□□ -1.64
LDLRP01130 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
LDLRP01130 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
LDLRP01130 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
LDLRP01130 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC4.82□□□□□ -1.64
LDLRP01130 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
LDLRP01130 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
LDLRP01130 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
LDLRP01130 SNORA62-201ENST00000365493 153 ntBASIC4.82□□□□□ -1.64
LDLRP01130 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
LDLRP01130 RNU6-796P-201ENST00000391086 107 ntBASIC4.82□□□□□ -1.64
LDLRP01130 MTATP6P31-201ENST00000406985 692 ntBASIC4.82□□□□□ -1.64
LDLRP01130 MTCO2P17-201ENST00000424336 677 ntBASIC4.82□□□□□ -1.64
LDLRP01130 RPL23AP4-201ENST00000427757 463 ntBASIC4.82□□□□□ -1.64
LDLRP01130 COX6CP13-201ENST00000428703 226 ntBASIC4.82□□□□□ -1.64
LDLRP01130 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC4.82□□□□□ -1.64
LDLRP01130 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC4.82□□□□□ -1.64
LDLRP01130 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC4.82□□□□□ -1.64
LDLRP01130 ZDHHC20P1-204ENST00000435787 423 ntBASIC4.82□□□□□ -1.64
LDLRP01130 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.82□□□□□ -1.64
LDLRP01130 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
LDLRP01130 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC4.82□□□□□ -1.64
LDLRP01130 TRY2P-201ENST00000448860 689 ntBASIC4.82□□□□□ -1.64
LDLRP01130 RPL7P55-201ENST00000450522 746 ntBASIC4.82□□□□□ -1.64
LDLRP01130 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC4.82□□□□□ -1.64
LDLRP01130 snoU13.20-201ENST00000459180 104 ntBASIC4.82□□□□□ -1.64
LDLRP01130 ATP5G1P3-201ENST00000463301 410 ntBASIC4.82□□□□□ -1.64
LDLRP01130 AC068587.1-201ENST00000483613 781 ntBASIC4.82□□□□□ -1.64
LDLRP01130 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC4.82□□□□□ -1.64
LDLRP01130 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC4.82□□□□□ -1.64
LDLRP01130 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC4.82□□□□□ -1.64
LDLRP01130 AP001372.4-201ENST00000524889 472 ntBASIC4.82□□□□□ -1.64
LDLRP01130 AC024940.3-201ENST00000538551 316 ntBASIC4.82□□□□□ -1.64
LDLRP01130 YWHABP2-201ENST00000540201 713 ntBASIC4.82□□□□□ -1.64
LDLRP01130 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
LDLRP01130 PYM1-205ENST00000547925 499 ntTSL 3 BASIC4.82□□□□□ -1.64
LDLRP01130 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC4.82□□□□□ -1.64
LDLRP01130 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC4.82□□□□□ -1.64
LDLRP01130 MYLK-221ENST00000583087 678 ntTSL 4 BASIC4.82□□□□□ -1.64
LDLRP01130 OR1AB1P-201ENST00000585564 761 ntBASIC4.82□□□□□ -1.64
LDLRP01130 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC4.82□□□□□ -1.64
LDLRP01130 AC133794.1-201ENST00000602731 914 ntBASIC4.82□□□□□ -1.64
LDLRP01130 AC016597.2-201ENST00000613256 341 ntBASIC4.82□□□□□ -1.64
LDLRP01130 EIF3FP1-201ENST00000613970 806 ntBASIC4.82□□□□□ -1.64
LDLRP01130 AL356274.1-201ENST00000617064 410 ntBASIC4.82□□□□□ -1.64
LDLRP01130 AC009704.2-201ENST00000618739 483 ntBASIC4.82□□□□□ -1.64
LDLRP01130 AC087385.3-201ENST00000620477 187 ntBASIC4.82□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 106.1 ms