Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 OR52E6-202ENST00000379946 954 ntBASIC4.68□□□□□ -1.66
NKX2-2O95096 AC093719.1-202ENST00000392735 373 ntBASIC4.68□□□□□ -1.66
NKX2-2O95096 IL6-203ENST00000401651 539 ntTSL 2 BASIC4.68□□□□□ -1.66
NKX2-2O95096 MTCO1P56-201ENST00000401674 224 ntBASIC4.68□□□□□ -1.66
NKX2-2O95096 DNAJA1P4-201ENST00000406473 1166 ntBASIC4.68□□□□□ -1.66
NKX2-2O95096 RNU6-77P-201ENST00000410554 91 ntBASIC4.68□□□□□ -1.66
NKX2-2O95096 AC114814.2-201ENST00000419195 485 ntBASIC4.68□□□□□ -1.66
NKX2-2O95096 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC4.68□□□□□ -1.66
NKX2-2O95096 AC104333.2-201ENST00000422630 192 ntBASIC4.68□□□□□ -1.66
NKX2-2O95096 AL355433.1-201ENST00000422804 300 ntBASIC4.68□□□□□ -1.66
NKX2-2O95096 MTCO2P17-201ENST00000424336 677 ntBASIC4.68□□□□□ -1.66
NKX2-2O95096 HMGN2P27-201ENST00000427352 270 ntBASIC4.68□□□□□ -1.66
NKX2-2O95096 USP12PY-201ENST00000427677 1064 ntBASIC4.68□□□□□ -1.66
NKX2-2O95096 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC4.68□□□□□ -1.66
NKX2-2O95096 GTF2IP3-201ENST00000433887 494 ntBASIC4.68□□□□□ -1.66
NKX2-2O95096 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC4.68□□□□□ -1.66
NKX2-2O95096 ZDHHC20P1-204ENST00000435787 423 ntBASIC4.68□□□□□ -1.66
NKX2-2O95096 HMGB1P45-201ENST00000435986 653 ntBASIC4.68□□□□□ -1.66
NKX2-2O95096 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC4.68□□□□□ -1.66
NKX2-2O95096 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC4.68□□□□□ -1.66
NKX2-2O95096 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC4.68□□□□□ -1.66
NKX2-2O95096 RPS29P9-201ENST00000440360 171 ntBASIC4.68□□□□□ -1.66
NKX2-2O95096 AL450023.3-201ENST00000440592 271 ntBASIC4.68□□□□□ -1.66
NKX2-2O95096 TXNP5-201ENST00000441043 315 ntBASIC4.68□□□□□ -1.66
NKX2-2O95096 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC4.68□□□□□ -1.66
NKX2-2O95096 AL009048.1-201ENST00000450437 298 ntBASIC4.68□□□□□ -1.66
NKX2-2O95096 AURKAPS1-201ENST00000451805 1212 ntBASIC4.68□□□□□ -1.66
NKX2-2O95096 OR2AF1P-201ENST00000454899 889 ntBASIC4.68□□□□□ -1.66
NKX2-2O95096 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC4.68□□□□□ -1.66
NKX2-2O95096 BX248409.1-201ENST00000455497 255 ntBASIC4.68□□□□□ -1.66
NKX2-2O95096 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC4.68□□□□□ -1.66
NKX2-2O95096 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC4.68□□□□□ -1.66
NKX2-2O95096 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC4.68□□□□□ -1.66
NKX2-2O95096 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC4.68□□□□□ -1.66
NKX2-2O95096 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC4.68□□□□□ -1.66
NKX2-2O95096 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC4.68□□□□□ -1.66
NKX2-2O95096 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC4.68□□□□□ -1.66
NKX2-2O95096 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC4.68□□□□□ -1.66
NKX2-2O95096 PYM1-205ENST00000547925 499 ntTSL 3 BASIC4.68□□□□□ -1.66
NKX2-2O95096 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC4.68□□□□□ -1.66
NKX2-2O95096 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC4.68□□□□□ -1.66
NKX2-2O95096 AC116553.2-201ENST00000564203 463 ntBASIC4.68□□□□□ -1.66
NKX2-2O95096 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC4.68□□□□□ -1.66
NKX2-2O95096 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC4.68□□□□□ -1.66
NKX2-2O95096 AC115085.1-201ENST00000588924 229 ntBASIC4.68□□□□□ -1.66
NKX2-2O95096 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC4.68□□□□□ -1.66
NKX2-2O95096 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC4.68□□□□□ -1.66
NKX2-2O95096 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC4.68□□□□□ -1.66
NKX2-2O95096 AP001160.4-201ENST00000596971 382 ntBASIC4.68□□□□□ -1.66
NKX2-2O95096 AL355816.1-201ENST00000607951 118 ntBASIC4.68□□□□□ -1.66
NKX2-2O95096 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC4.68□□□□□ -1.66
NKX2-2O95096 AC073869.10-201ENST00000642016 354 ntBASIC4.68□□□□□ -1.66
NKX2-2O95096 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
NKX2-2O95096 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
NKX2-2O95096 AC063976.2-201ENST00000425667 3556 ntBASIC4.68□□□□□ -1.66
NKX2-2O95096 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
NKX2-2O95096 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
NKX2-2O95096 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
NKX2-2O95096 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
NKX2-2O95096 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
NKX2-2O95096 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
NKX2-2O95096 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
NKX2-2O95096 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC4.68□□□□□ -1.66
NKX2-2O95096 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
NKX2-2O95096 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
NKX2-2O95096 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
NKX2-2O95096 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC4.67□□□□□ -1.66
NKX2-2O95096 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
NKX2-2O95096 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
NKX2-2O95096 AC125336.1-201ENST00000508893 2827 ntBASIC4.67□□□□□ -1.66
NKX2-2O95096 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
NKX2-2O95096 AC011447.7-201ENST00000624228 1590 ntBASIC4.67□□□□□ -1.66
NKX2-2O95096 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
NKX2-2O95096 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
NKX2-2O95096 SNURFL-201ENST00000309296 343 ntBASIC4.67□□□□□ -1.66
NKX2-2O95096 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
NKX2-2O95096 AC013442.1-201ENST00000397347 228 ntBASIC4.67□□□□□ -1.66
NKX2-2O95096 AC027644.1-201ENST00000419595 298 ntBASIC4.67□□□□□ -1.66
NKX2-2O95096 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC4.67□□□□□ -1.66
NKX2-2O95096 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC4.67□□□□□ -1.66
NKX2-2O95096 RPL35AP21-201ENST00000437667 333 ntBASIC4.67□□□□□ -1.66
NKX2-2O95096 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC4.67□□□□□ -1.66
NKX2-2O95096 AL591363.1-201ENST00000450091 483 ntBASIC4.67□□□□□ -1.66
NKX2-2O95096 RPL37P3-201ENST00000456825 293 ntBASIC4.67□□□□□ -1.66
NKX2-2O95096 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC4.67□□□□□ -1.66
NKX2-2O95096 SSR3-206ENST00000476217 807 ntTSL 3 BASIC4.67□□□□□ -1.66
NKX2-2O95096 AC091959.2-201ENST00000477363 321 ntBASIC4.67□□□□□ -1.66
NKX2-2O95096 AC073522.1-201ENST00000483312 377 ntBASIC4.67□□□□□ -1.66
NKX2-2O95096 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC4.67□□□□□ -1.66
NKX2-2O95096 AC010350.1-201ENST00000504908 231 ntBASIC4.67□□□□□ -1.66
NKX2-2O95096 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC4.67□□□□□ -1.66
NKX2-2O95096 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC4.67□□□□□ -1.66
NKX2-2O95096 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC4.67□□□□□ -1.66
NKX2-2O95096 IGJP1-201ENST00000522682 475 ntBASIC4.67□□□□□ -1.66
NKX2-2O95096 IGHVIII-67-4-201ENST00000524281 296 ntBASIC4.67□□□□□ -1.66
NKX2-2O95096 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC4.67□□□□□ -1.66
NKX2-2O95096 LRRC6P1-201ENST00000532188 885 ntBASIC4.67□□□□□ -1.66
NKX2-2O95096 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC4.67□□□□□ -1.66
NKX2-2O95096 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC4.67□□□□□ -1.66
NKX2-2O95096 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC4.67□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 98.1 ms