Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 AC104229.1-201ENST00000561364 255 ntBASIC4.57□□□□□ -1.68
SNX3O60493 RN7SL802P-201ENST00000577858 299 ntBASIC4.57□□□□□ -1.68
SNX3O60493 AC022884.3-201ENST00000579571 248 ntBASIC4.57□□□□□ -1.68
SNX3O60493 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC4.57□□□□□ -1.68
SNX3O60493 AC027243.2-201ENST00000602530 724 ntBASIC4.57□□□□□ -1.68
SNX3O60493 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC4.57□□□□□ -1.68
SNX3O60493 AC023762.1-201ENST00000603280 584 ntBASIC4.57□□□□□ -1.68
SNX3O60493 MTATP6P2-201ENST00000603319 678 ntBASIC4.57□□□□□ -1.68
SNX3O60493 AC026741.1-201ENST00000605892 482 ntBASIC4.57□□□□□ -1.68
SNX3O60493 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC4.57□□□□□ -1.68
SNX3O60493 AL359513.1-201ENST00000614364 557 ntBASIC4.57□□□□□ -1.68
SNX3O60493 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC4.57□□□□□ -1.68
SNX3O60493 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
SNX3O60493 AC091905.2-201ENST00000623143 306 ntBASIC4.57□□□□□ -1.68
SNX3O60493 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC4.57□□□□□ -1.68
SNX3O60493 AP003497.2-201ENST00000624220 967 ntBASIC4.57□□□□□ -1.68
SNX3O60493 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC4.57□□□□□ -1.68
SNX3O60493 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.57□□□□□ -1.68
SNX3O60493 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
SNX3O60493 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
SNX3O60493 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
SNX3O60493 RMST-202ENST00000541282 2099 ntTSL 2 BASIC4.57□□□□□ -1.68
SNX3O60493 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
SNX3O60493 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
SNX3O60493 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
SNX3O60493 ZFRP1-201ENST00000457579 2970 ntBASIC4.56□□□□□ -1.68
SNX3O60493 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC4.56□□□□□ -1.68
SNX3O60493 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
SNX3O60493 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC4.56□□□□□ -1.68
SNX3O60493 AL136520.1-201ENST00000600311 1322 ntBASIC4.56□□□□□ -1.68
SNX3O60493 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
SNX3O60493 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.56□□□□□ -1.68
SNX3O60493 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
SNX3O60493 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
SNX3O60493 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
SNX3O60493 MIR142-201ENST00000384835 87 ntBASIC4.56□□□□□ -1.68
SNX3O60493 AL078604.1-201ENST00000404609 466 ntBASIC4.56□□□□□ -1.68
SNX3O60493 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC4.56□□□□□ -1.68
SNX3O60493 LINC01347-201ENST00000417964 355 ntBASIC4.56□□□□□ -1.68
SNX3O60493 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC4.56□□□□□ -1.68
SNX3O60493 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC4.56□□□□□ -1.68
SNX3O60493 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC4.56□□□□□ -1.68
SNX3O60493 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC4.56□□□□□ -1.68
SNX3O60493 AC104306.1-201ENST00000449702 371 ntBASIC4.56□□□□□ -1.68
SNX3O60493 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC4.56□□□□□ -1.68
SNX3O60493 NPM1P39-201ENST00000449818 867 ntBASIC4.56□□□□□ -1.68
SNX3O60493 RPL7P55-201ENST00000450522 746 ntBASIC4.56□□□□□ -1.68
SNX3O60493 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
SNX3O60493 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC4.56□□□□□ -1.68
SNX3O60493 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
SNX3O60493 AC092647.2-201ENST00000452998 253 ntBASIC4.56□□□□□ -1.68
SNX3O60493 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC4.56□□□□□ -1.68
SNX3O60493 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC4.56□□□□□ -1.68
SNX3O60493 NIP7P2-201ENST00000485801 544 ntBASIC4.56□□□□□ -1.68
SNX3O60493 HMGN2P25-201ENST00000486956 268 ntBASIC4.56□□□□□ -1.68
SNX3O60493 AC112518.2-201ENST00000508565 425 ntBASIC4.56□□□□□ -1.68
SNX3O60493 AC121161.1-201ENST00000510606 652 ntBASIC4.56□□□□□ -1.68
SNX3O60493 HNRNPKP5-201ENST00000515300 253 ntBASIC4.56□□□□□ -1.68
SNX3O60493 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC4.56□□□□□ -1.68
SNX3O60493 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC4.56□□□□□ -1.68
SNX3O60493 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC4.56□□□□□ -1.68
SNX3O60493 GOLT1B-205ENST00000540141 1055 ntAPPRIS ALT1 TSL 4 BASIC4.56□□□□□ -1.68
SNX3O60493 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC4.56□□□□□ -1.68
SNX3O60493 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC4.56□□□□□ -1.68
SNX3O60493 MIR5699-201ENST00000578903 90 ntBASIC4.56□□□□□ -1.68
SNX3O60493 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC4.56□□□□□ -1.68
SNX3O60493 MIR548Y-201ENST00000582739 110 ntBASIC4.56□□□□□ -1.68
SNX3O60493 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC4.56□□□□□ -1.68
SNX3O60493 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC4.56□□□□□ -1.68
SNX3O60493 AC092953.2-201ENST00000608000 699 ntBASIC4.56□□□□□ -1.68
SNX3O60493 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC4.56□□□□□ -1.68
SNX3O60493 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4.56□□□□□ -1.68
SNX3O60493 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC4.56□□□□□ -1.68
SNX3O60493 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
SNX3O60493 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC4.56□□□□□ -1.68
SNX3O60493 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.56□□□□□ -1.68
SNX3O60493 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
SNX3O60493 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
SNX3O60493 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
SNX3O60493 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.55□□□□□ -1.68
SNX3O60493 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC4.55□□□□□ -1.68
SNX3O60493 AC011493.1-201ENST00000596753 1632 ntBASIC4.55□□□□□ -1.68
SNX3O60493 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC4.55□□□□□ -1.68
SNX3O60493 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
SNX3O60493 RNA5SP183-201ENST00000362452 119 ntBASIC4.55□□□□□ -1.68
SNX3O60493 U3.2-201ENST00000362981 210 ntBASIC4.55□□□□□ -1.68
SNX3O60493 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
SNX3O60493 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC4.55□□□□□ -1.68
SNX3O60493 RNU6-1176P-201ENST00000390955 107 ntBASIC4.55□□□□□ -1.68
SNX3O60493 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
SNX3O60493 HMGB1P13-201ENST00000406019 642 ntBASIC4.55□□□□□ -1.68
SNX3O60493 ATF1P1-201ENST00000406040 927 ntBASIC4.55□□□□□ -1.68
SNX3O60493 AC099535.1-201ENST00000408928 371 ntBASIC4.55□□□□□ -1.68
SNX3O60493 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC4.55□□□□□ -1.68
SNX3O60493 AL445183.3-201ENST00000414168 502 ntBASIC4.55□□□□□ -1.68
SNX3O60493 AC023128.2-201ENST00000420880 1223 ntBASIC4.55□□□□□ -1.68
SNX3O60493 HNRNPA3P4-201ENST00000427514 803 ntBASIC4.55□□□□□ -1.68
SNX3O60493 CDY14P-201ENST00000431260 1014 ntBASIC4.55□□□□□ -1.68
SNX3O60493 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC4.55□□□□□ -1.68
SNX3O60493 CDY12P-201ENST00000440679 1015 ntBASIC4.55□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 97 ms