Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
PHGDHO43175 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
PHGDHO43175 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC5.36□□□□□ -1.55
PHGDHO43175 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC5.36□□□□□ -1.55
PHGDHO43175 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
PHGDHO43175 RNU1-146P-201ENST00000364015 165 ntBASIC5.36□□□□□ -1.55
PHGDHO43175 RNU6-619P-201ENST00000365146 108 ntBASIC5.36□□□□□ -1.55
PHGDHO43175 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC5.36□□□□□ -1.55
PHGDHO43175 PKIB-203ENST00000368446 556 ntTSL 2 BASIC5.36□□□□□ -1.55
PHGDHO43175 OR1L6-202ENST00000373684 1044 ntBASIC5.36□□□□□ -1.55
PHGDHO43175 DBIP1-201ENST00000401435 260 ntBASIC5.36□□□□□ -1.55
PHGDHO43175 TMSB4XP8-201ENST00000402089 135 ntBASIC5.36□□□□□ -1.55
PHGDHO43175 GAPDHP42-201ENST00000406848 981 ntBASIC5.36□□□□□ -1.55
PHGDHO43175 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
PHGDHO43175 TMSB4XP6-201ENST00000415187 135 ntBASIC5.36□□□□□ -1.55
PHGDHO43175 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC5.36□□□□□ -1.55
PHGDHO43175 MTND2P18-201ENST00000419962 1030 ntBASIC5.36□□□□□ -1.55
PHGDHO43175 AC093155.2-201ENST00000420734 937 ntBASIC5.36□□□□□ -1.55
PHGDHO43175 RPL7P53-201ENST00000421245 739 ntBASIC5.36□□□□□ -1.55
PHGDHO43175 REREP1Y-201ENST00000422655 198 ntBASIC5.36□□□□□ -1.55
PHGDHO43175 TNPO1P1-201ENST00000423641 1138 ntBASIC5.36□□□□□ -1.55
PHGDHO43175 TMSB4XP1-201ENST00000424567 135 ntBASIC5.36□□□□□ -1.55
PHGDHO43175 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC5.36□□□□□ -1.55
PHGDHO43175 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC5.36□□□□□ -1.55
PHGDHO43175 AC009227.2-201ENST00000432599 511 ntTSL 3 BASIC5.36□□□□□ -1.55
PHGDHO43175 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC5.36□□□□□ -1.55
PHGDHO43175 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC5.36□□□□□ -1.55
PHGDHO43175 REREP2Y-201ENST00000439103 200 ntBASIC5.36□□□□□ -1.55
PHGDHO43175 AL138899.2-201ENST00000439139 499 ntBASIC5.36□□□□□ -1.55
PHGDHO43175 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC5.36□□□□□ -1.55
PHGDHO43175 AC019185.1-201ENST00000442718 389 ntBASIC5.36□□□□□ -1.55
PHGDHO43175 NPM1P39-201ENST00000449818 867 ntBASIC5.36□□□□□ -1.55
PHGDHO43175 AC026348.1-201ENST00000462549 1053 ntBASIC5.36□□□□□ -1.55
PHGDHO43175 AC092754.1-201ENST00000472975 479 ntBASIC5.36□□□□□ -1.55
PHGDHO43175 RPS27P23-201ENST00000487608 251 ntBASIC5.36□□□□□ -1.55
PHGDHO43175 OR5H4P-201ENST00000510851 923 ntBASIC5.36□□□□□ -1.55
PHGDHO43175 MTND6P2-201ENST00000512226 524 ntBASIC5.36□□□□□ -1.55
PHGDHO43175 AC008837.2-201ENST00000513076 418 ntBASIC5.36□□□□□ -1.55
PHGDHO43175 TCP11X3P-202ENST00000514289 1254 ntBASIC5.36□□□□□ -1.55
PHGDHO43175 CYCSP22-201ENST00000517555 339 ntBASIC5.36□□□□□ -1.55
PHGDHO43175 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC5.36□□□□□ -1.55
PHGDHO43175 LY96-202ENST00000518893 430 ntTSL 3 BASIC5.36□□□□□ -1.55
PHGDHO43175 AP003461.1-201ENST00000528866 78 ntBASIC5.36□□□□□ -1.55
PHGDHO43175 AC091515.1-201ENST00000548110 679 ntBASIC5.36□□□□□ -1.55
PHGDHO43175 AC087465.1-201ENST00000560574 245 ntBASIC5.36□□□□□ -1.55
PHGDHO43175 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC5.36□□□□□ -1.55
PHGDHO43175 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC5.36□□□□□ -1.55
PHGDHO43175 AC003991.1-201ENST00000594469 484 ntTSL 5 BASIC5.36□□□□□ -1.55
PHGDHO43175 AC124856.1-201ENST00000600819 896 ntBASIC5.36□□□□□ -1.55
PHGDHO43175 CDC42EP3P1-201ENST00000601004 764 ntBASIC5.36□□□□□ -1.55
PHGDHO43175 PSMA6P4-201ENST00000603247 718 ntBASIC5.36□□□□□ -1.55
PHGDHO43175 AC013444.2-201ENST00000603317 787 ntBASIC5.36□□□□□ -1.55
PHGDHO43175 AC114878.2-201ENST00000604863 1251 ntBASIC5.36□□□□□ -1.55
PHGDHO43175 AL365181.4-201ENST00000609800 547 ntBASIC5.36□□□□□ -1.55
PHGDHO43175 AL096712.1-201ENST00000614561 159 ntBASIC5.36□□□□□ -1.55
PHGDHO43175 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC5.36□□□□□ -1.55
PHGDHO43175 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
PHGDHO43175 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC5.36□□□□□ -1.55
PHGDHO43175 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
PHGDHO43175 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
PHGDHO43175 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC5.36□□□□□ -1.55
PHGDHO43175 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC5.36□□□□□ -1.55
PHGDHO43175 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC5.36□□□□□ -1.55
PHGDHO43175 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
PHGDHO43175 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC5.36□□□□□ -1.55
PHGDHO43175 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
PHGDHO43175 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
PHGDHO43175 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC5.35□□□□□ -1.55
PHGDHO43175 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC5.35□□□□□ -1.55
PHGDHO43175 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC5.35□□□□□ -1.55
PHGDHO43175 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC5.35□□□□□ -1.55
PHGDHO43175 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
PHGDHO43175 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC5.35□□□□□ -1.55
PHGDHO43175 AL603750.1-201ENST00000624216 1717 ntBASIC5.35□□□□□ -1.55
PHGDHO43175 Z99496.1-201ENST00000469424 1477 ntBASIC5.35□□□□□ -1.55
PHGDHO43175 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
PHGDHO43175 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC5.35□□□□□ -1.55
PHGDHO43175 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
PHGDHO43175 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC5.35□□□□□ -1.55
PHGDHO43175 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
PHGDHO43175 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
PHGDHO43175 U3.7-201ENST00000363668 216 ntBASIC5.35□□□□□ -1.55
PHGDHO43175 SNORD65.1-201ENST00000390889 71 ntBASIC5.35□□□□□ -1.55
PHGDHO43175 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
PHGDHO43175 GSTM3P2-201ENST00000412746 530 ntBASIC5.35□□□□□ -1.55
PHGDHO43175 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC5.35□□□□□ -1.55
PHGDHO43175 MTND4P22-201ENST00000413116 1169 ntBASIC5.35□□□□□ -1.55
PHGDHO43175 DPPA2P2-201ENST00000418220 897 ntBASIC5.35□□□□□ -1.55
PHGDHO43175 AC006960.1-201ENST00000419980 153 ntBASIC5.35□□□□□ -1.55
PHGDHO43175 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC5.35□□□□□ -1.55
PHGDHO43175 MRPS36P1-201ENST00000421291 307 ntBASIC5.35□□□□□ -1.55
PHGDHO43175 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC5.35□□□□□ -1.55
PHGDHO43175 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC5.35□□□□□ -1.55
PHGDHO43175 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC5.35□□□□□ -1.55
PHGDHO43175 AC016772.1-201ENST00000444170 1261 ntBASIC5.35□□□□□ -1.55
PHGDHO43175 HMGN1P2-201ENST00000445197 310 ntBASIC5.35□□□□□ -1.55
PHGDHO43175 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC5.35□□□□□ -1.55
PHGDHO43175 OR52E3P-201ENST00000452083 936 ntBASIC5.35□□□□□ -1.55
PHGDHO43175 ART2BP-201ENST00000453501 499 ntBASIC5.35□□□□□ -1.55
PHGDHO43175 AL035090.1-201ENST00000454835 332 ntBASIC5.35□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 98.4 ms