Protein–RNA interactions for Protein: O15116

LSM1, U6 snRNA-associated Sm-like protein LSm1, humanhuman

Known RBP Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1O15116 AC108463.1-201ENST00000450258 347 ntBASIC4.46□□□□□ -1.7
LSM1O15116 snoU13.20-201ENST00000459180 104 ntBASIC4.46□□□□□ -1.7
LSM1O15116 AC092925.1-201ENST00000470739 493 ntTSL 3 BASIC4.46□□□□□ -1.7
LSM1O15116 RPS26P28-201ENST00000470806 348 ntBASIC4.46□□□□□ -1.7
LSM1O15116 RPL23AP65-201ENST00000475608 468 ntBASIC4.46□□□□□ -1.7
LSM1O15116 RPSAP50-201ENST00000481955 852 ntBASIC4.46□□□□□ -1.7
LSM1O15116 AC093763.2-201ENST00000505334 1223 ntBASIC4.46□□□□□ -1.7
LSM1O15116 MGST2-204ENST00000506797 634 ntTSL 2 BASIC4.46□□□□□ -1.7
LSM1O15116 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC4.46□□□□□ -1.7
LSM1O15116 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC4.46□□□□□ -1.7
LSM1O15116 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC4.46□□□□□ -1.7
LSM1O15116 IGLV2-28-201ENST00000520681 304 ntBASIC4.46□□□□□ -1.7
LSM1O15116 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC4.46□□□□□ -1.7
LSM1O15116 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC4.46□□□□□ -1.7
LSM1O15116 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC4.46□□□□□ -1.7
LSM1O15116 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC4.46□□□□□ -1.7
LSM1O15116 C1GALT1P1-201ENST00000548895 1089 ntBASIC4.46□□□□□ -1.7
LSM1O15116 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC4.46□□□□□ -1.7
LSM1O15116 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC4.46□□□□□ -1.7
LSM1O15116 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC4.46□□□□□ -1.7
LSM1O15116 AL391358.1-201ENST00000605342 190 ntBASIC4.46□□□□□ -1.7
LSM1O15116 AC017076.1-201ENST00000607613 578 ntBASIC4.46□□□□□ -1.7
LSM1O15116 AC092159.4-201ENST00000624944 550 ntBASIC4.46□□□□□ -1.7
LSM1O15116 AC106871.1-201ENST00000568324 3102 ntBASIC4.46□□□□□ -1.7
LSM1O15116 LINC02471-203ENST00000641941 4752 ntBASIC4.46□□□□□ -1.7
LSM1O15116 INTS6P1-201ENST00000504674 2530 ntBASIC4.46□□□□□ -1.7
LSM1O15116 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
LSM1O15116 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
LSM1O15116 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
LSM1O15116 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
LSM1O15116 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
LSM1O15116 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
LSM1O15116 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.45□□□□□ -1.7
LSM1O15116 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
LSM1O15116 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
LSM1O15116 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.45□□□□□ -1.7
LSM1O15116 AC095050.2-201ENST00000510748 1458 ntBASIC4.45□□□□□ -1.7
LSM1O15116 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
LSM1O15116 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
LSM1O15116 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
LSM1O15116 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
LSM1O15116 RNA5SP151-201ENST00000365632 117 ntBASIC4.45□□□□□ -1.7
LSM1O15116 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
LSM1O15116 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
LSM1O15116 RN7SKP213-201ENST00000410746 298 ntBASIC4.45□□□□□ -1.7
LSM1O15116 RSU1P3-201ENST00000412878 835 ntBASIC4.45□□□□□ -1.7
LSM1O15116 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
LSM1O15116 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
LSM1O15116 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
LSM1O15116 H2AFZP5-201ENST00000446960 382 ntBASIC4.45□□□□□ -1.7
LSM1O15116 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC4.45□□□□□ -1.7
LSM1O15116 OR52J1P-201ENST00000450596 932 ntBASIC4.45□□□□□ -1.7
LSM1O15116 EIF2S2P4-201ENST00000461070 984 ntBASIC4.45□□□□□ -1.7
LSM1O15116 AL592156.1-201ENST00000508758 304 ntBASIC4.45□□□□□ -1.7
LSM1O15116 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC4.45□□□□□ -1.7
LSM1O15116 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC4.45□□□□□ -1.7
LSM1O15116 AC124242.1-205ENST00000517798 646 ntTSL 5 BASIC4.45□□□□□ -1.7
LSM1O15116 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC4.45□□□□□ -1.7
LSM1O15116 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC4.45□□□□□ -1.7
LSM1O15116 OR10G5P-201ENST00000532733 358 ntBASIC4.45□□□□□ -1.7
LSM1O15116 RFPL1S-203ENST00000539579 330 ntBASIC4.45□□□□□ -1.7
LSM1O15116 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
LSM1O15116 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC4.45□□□□□ -1.7
LSM1O15116 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC4.45□□□□□ -1.7
LSM1O15116 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC4.45□□□□□ -1.7
LSM1O15116 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC4.45□□□□□ -1.7
LSM1O15116 AC015727.1-201ENST00000572792 512 ntTSL 5 BASIC4.45□□□□□ -1.7
LSM1O15116 AC027455.1-201ENST00000574104 594 ntBASIC4.45□□□□□ -1.7
LSM1O15116 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC4.45□□□□□ -1.7
LSM1O15116 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC4.45□□□□□ -1.7
LSM1O15116 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC4.45□□□□□ -1.7
LSM1O15116 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC4.45□□□□□ -1.7
LSM1O15116 MIR6826-201ENST00000617808 98 ntBASIC4.45□□□□□ -1.7
LSM1O15116 MIR6886-201ENST00000619864 61 ntBASIC4.45□□□□□ -1.7
LSM1O15116 MIR7154-201ENST00000620673 73 ntBASIC4.45□□□□□ -1.7
LSM1O15116 AP006248.2-201ENST00000623309 592 ntBASIC4.45□□□□□ -1.7
LSM1O15116 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.45□□□□□ -1.7
LSM1O15116 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
LSM1O15116 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.45□□□□□ -1.7
LSM1O15116 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
LSM1O15116 PHKBP1-201ENST00000450951 1951 ntBASIC4.45□□□□□ -1.7
LSM1O15116 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
LSM1O15116 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
LSM1O15116 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
LSM1O15116 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.45□□□□□ -1.7
LSM1O15116 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.45□□□□□ -1.7
LSM1O15116 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
LSM1O15116 AC009951.1-201ENST00000623674 2614 ntBASIC4.44□□□□□ -1.7
LSM1O15116 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.44□□□□□ -1.7
LSM1O15116 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
LSM1O15116 AC114546.3-201ENST00000623582 1734 ntBASIC4.44□□□□□ -1.7
LSM1O15116 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.44□□□□□ -1.7
LSM1O15116 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
LSM1O15116 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
LSM1O15116 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
LSM1O15116 RN7SKP44-201ENST00000363602 316 ntBASIC4.44□□□□□ -1.7
LSM1O15116 RHOT1P2-201ENST00000366423 333 ntBASIC4.44□□□□□ -1.7
LSM1O15116 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.44□□□□□ -1.7
LSM1O15116 MIR1183-201ENST00000408856 89 ntBASIC4.44□□□□□ -1.7
LSM1O15116 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC4.44□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 111.9 ms