Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
FOXN3O00409 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC5.55□□□□□ -1.52
FOXN3O00409 PCAT14-202ENST00000627127 3935 ntBASIC5.55□□□□□ -1.52
FOXN3O00409 POMP-202ENST00000460403 1428 ntTSL 3 BASIC5.55□□□□□ -1.52
FOXN3O00409 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
FOXN3O00409 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC5.55□□□□□ -1.52
FOXN3O00409 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.55□□□□□ -1.52
FOXN3O00409 AC005261.4-201ENST00000600047 1385 ntBASIC5.55□□□□□ -1.52
FOXN3O00409 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
FOXN3O00409 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC5.54□□□□□ -1.52
FOXN3O00409 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.54□□□□□ -1.52
FOXN3O00409 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
FOXN3O00409 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
FOXN3O00409 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC5.54□□□□□ -1.52
FOXN3O00409 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC5.54□□□□□ -1.52
FOXN3O00409 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC5.54□□□□□ -1.52
FOXN3O00409 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
FOXN3O00409 U3.2-201ENST00000362981 210 ntBASIC5.54□□□□□ -1.52
FOXN3O00409 RN7SKP162-201ENST00000363605 345 ntBASIC5.54□□□□□ -1.52
FOXN3O00409 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC5.54□□□□□ -1.52
FOXN3O00409 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
FOXN3O00409 IL6-203ENST00000401651 539 ntTSL 2 BASIC5.54□□□□□ -1.52
FOXN3O00409 AL390316.1-201ENST00000406279 553 ntBASIC5.54□□□□□ -1.52
FOXN3O00409 MIR1182-201ENST00000408363 97 ntBASIC5.54□□□□□ -1.52
FOXN3O00409 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC5.54□□□□□ -1.52
FOXN3O00409 RN7SKP247-201ENST00000411094 308 ntBASIC5.54□□□□□ -1.52
FOXN3O00409 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC5.54□□□□□ -1.52
FOXN3O00409 MOB1AP1-201ENST00000430903 535 ntBASIC5.54□□□□□ -1.52
FOXN3O00409 UBE2V1P5-201ENST00000440070 405 ntBASIC5.54□□□□□ -1.52
FOXN3O00409 EEF1A1P39-201ENST00000440791 250 ntBASIC5.54□□□□□ -1.52
FOXN3O00409 RPL7AP61-201ENST00000443410 636 ntBASIC5.54□□□□□ -1.52
FOXN3O00409 HMGB3P6-201ENST00000444896 598 ntBASIC5.54□□□□□ -1.52
FOXN3O00409 MTCYBP11-201ENST00000447254 1109 ntBASIC5.54□□□□□ -1.52
FOXN3O00409 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC5.54□□□□□ -1.52
FOXN3O00409 Z92846.1-201ENST00000456203 268 ntBASIC5.54□□□□□ -1.52
FOXN3O00409 SNORD11.1-201ENST00000459482 85 ntBASIC5.54□□□□□ -1.52
FOXN3O00409 AC096992.1-201ENST00000459808 709 ntBASIC5.54□□□□□ -1.52
FOXN3O00409 AC073522.1-201ENST00000483312 377 ntBASIC5.54□□□□□ -1.52
FOXN3O00409 UBA52P7-201ENST00000486088 380 ntBASIC5.54□□□□□ -1.52
FOXN3O00409 EIF3LP3-201ENST00000495197 822 ntBASIC5.54□□□□□ -1.52
FOXN3O00409 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC5.54□□□□□ -1.52
FOXN3O00409 AC097173.1-201ENST00000505862 819 ntBASIC5.54□□□□□ -1.52
FOXN3O00409 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC5.54□□□□□ -1.52
FOXN3O00409 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC5.54□□□□□ -1.52
FOXN3O00409 IGKV2-36-201ENST00000519999 223 ntBASIC5.54□□□□□ -1.52
FOXN3O00409 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC5.54□□□□□ -1.52
FOXN3O00409 AC138832.1-201ENST00000522871 556 ntBASIC5.54□□□□□ -1.52
FOXN3O00409 MTCO3P15-201ENST00000526563 574 ntBASIC5.54□□□□□ -1.52
FOXN3O00409 DEFB130C-202ENST00000530001 230 ntBASIC5.54□□□□□ -1.52
FOXN3O00409 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
FOXN3O00409 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC5.54□□□□□ -1.52
FOXN3O00409 AC127024.5-201ENST00000580085 462 ntBASIC5.54□□□□□ -1.52
FOXN3O00409 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC5.54□□□□□ -1.52
FOXN3O00409 AL392112.1-201ENST00000605115 829 ntBASIC5.54□□□□□ -1.52
FOXN3O00409 WWOX-217ENST00000620008 450 ntTSL 2 BASIC5.54□□□□□ -1.52
FOXN3O00409 AP000676.4-201ENST00000624659 623 ntBASIC5.54□□□□□ -1.52
FOXN3O00409 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC5.54□□□□□ -1.52
FOXN3O00409 AC135068.12-201ENST00000637370 931 ntBASIC5.54□□□□□ -1.52
FOXN3O00409 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
FOXN3O00409 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC5.54□□□□□ -1.52
FOXN3O00409 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
FOXN3O00409 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
FOXN3O00409 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
FOXN3O00409 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
FOXN3O00409 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
FOXN3O00409 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
FOXN3O00409 AC138393.1-206ENST00000540997 1886 ntBASIC5.54□□□□□ -1.52
FOXN3O00409 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC5.53□□□□□ -1.52
FOXN3O00409 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC5.53□□□□□ -1.52
FOXN3O00409 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
FOXN3O00409 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
FOXN3O00409 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
FOXN3O00409 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC5.53□□□□□ -1.52
FOXN3O00409 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC5.53□□□□□ -1.52
FOXN3O00409 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
FOXN3O00409 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
FOXN3O00409 AC011493.1-201ENST00000596753 1632 ntBASIC5.53□□□□□ -1.52
FOXN3O00409 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
FOXN3O00409 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
FOXN3O00409 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
FOXN3O00409 RNU6-304P-201ENST00000364855 107 ntBASIC5.53□□□□□ -1.52
FOXN3O00409 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
FOXN3O00409 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
FOXN3O00409 RNU6-636P-201ENST00000384598 107 ntBASIC5.53□□□□□ -1.52
FOXN3O00409 MIR323B-201ENST00000385269 82 ntBASIC5.53□□□□□ -1.52
FOXN3O00409 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
FOXN3O00409 RNU6-1242P-201ENST00000391052 103 ntBASIC5.53□□□□□ -1.52
FOXN3O00409 NUDT19P3-201ENST00000404698 555 ntBASIC5.53□□□□□ -1.52
FOXN3O00409 AL035079.1-201ENST00000405210 287 ntBASIC5.53□□□□□ -1.52
FOXN3O00409 AL512430.2-201ENST00000406786 339 ntBASIC5.53□□□□□ -1.52
FOXN3O00409 U3.32-201ENST00000408116 212 ntBASIC5.53□□□□□ -1.52
FOXN3O00409 XKRYP1-201ENST00000423438 492 ntBASIC5.53□□□□□ -1.52
FOXN3O00409 AC108075.1-201ENST00000424692 529 ntBASIC5.53□□□□□ -1.52
FOXN3O00409 RPS24P8-201ENST00000431490 402 ntBASIC5.53□□□□□ -1.52
FOXN3O00409 XKRYP2-201ENST00000432915 492 ntBASIC5.53□□□□□ -1.52
FOXN3O00409 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC5.53□□□□□ -1.52
FOXN3O00409 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
FOXN3O00409 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC5.53□□□□□ -1.52
FOXN3O00409 AC099063.2-201ENST00000446360 662 ntBASIC5.53□□□□□ -1.52
FOXN3O00409 AL935212.3-201ENST00000450729 284 ntBASIC5.53□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 85.5 ms