Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC2.37□□□□□ -2.03
CHKB-CPT1BH3BT56 NDFIP2-203ENST00000487865 1384 ntTSL 2 BASIC2.36□□□□□ -2.03
CHKB-CPT1BH3BT56 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
CHKB-CPT1BH3BT56 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
CHKB-CPT1BH3BT56 AC021755.1-201ENST00000559747 1447 ntBASIC2.36□□□□□ -2.03
CHKB-CPT1BH3BT56 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
CHKB-CPT1BH3BT56 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC2.36□□□□□ -2.03
CHKB-CPT1BH3BT56 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC2.36□□□□□ -2.03
CHKB-CPT1BH3BT56 RNU1-18P-201ENST00000363062 164 ntBASIC2.36□□□□□ -2.03
CHKB-CPT1BH3BT56 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC2.36□□□□□ -2.03
CHKB-CPT1BH3BT56 S100A7-201ENST00000368722 442 ntAPPRIS P1 TSL 3 BASIC2.36□□□□□ -2.03
CHKB-CPT1BH3BT56 OR13C3-201ENST00000374781 1108 ntBASIC2.36□□□□□ -2.03
CHKB-CPT1BH3BT56 MIR184-201ENST00000384962 84 ntBASIC2.36□□□□□ -2.03
CHKB-CPT1BH3BT56 Z97832.1-201ENST00000402490 328 ntBASIC2.36□□□□□ -2.03
CHKB-CPT1BH3BT56 AL590704.1-201ENST00000402856 794 ntBASIC2.36□□□□□ -2.03
CHKB-CPT1BH3BT56 MIR1231-201ENST00000408101 92 ntBASIC2.36□□□□□ -2.03
CHKB-CPT1BH3BT56 MIR1182-201ENST00000408363 97 ntBASIC2.36□□□□□ -2.03
CHKB-CPT1BH3BT56 LINC02470-201ENST00000412084 979 ntTSL 2 BASIC2.36□□□□□ -2.03
CHKB-CPT1BH3BT56 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC2.36□□□□□ -2.03
CHKB-CPT1BH3BT56 AL138828.1-204ENST00000413745 898 ntTSL 5 BASIC2.36□□□□□ -2.03
CHKB-CPT1BH3BT56 TBCAP2-201ENST00000416175 326 ntBASIC2.36□□□□□ -2.03
CHKB-CPT1BH3BT56 AC073464.3-201ENST00000422564 712 ntBASIC2.36□□□□□ -2.03
CHKB-CPT1BH3BT56 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC2.36□□□□□ -2.03
CHKB-CPT1BH3BT56 AC127526.2-201ENST00000426436 775 ntBASIC2.36□□□□□ -2.03
CHKB-CPT1BH3BT56 RPS4XP16-201ENST00000427198 791 ntBASIC2.36□□□□□ -2.03
CHKB-CPT1BH3BT56 IFNNP1-201ENST00000429219 553 ntBASIC2.36□□□□□ -2.03
CHKB-CPT1BH3BT56 KRT18P53-201ENST00000431919 117 ntBASIC2.36□□□□□ -2.03
CHKB-CPT1BH3BT56 NDUFS5P5-201ENST00000437256 321 ntBASIC2.36□□□□□ -2.03
CHKB-CPT1BH3BT56 SETP5-201ENST00000437270 562 ntBASIC2.36□□□□□ -2.03
CHKB-CPT1BH3BT56 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC2.36□□□□□ -2.03
CHKB-CPT1BH3BT56 TCEA1P1-201ENST00000449716 880 ntBASIC2.36□□□□□ -2.03
CHKB-CPT1BH3BT56 OR52J1P-201ENST00000450596 932 ntBASIC2.36□□□□□ -2.03
CHKB-CPT1BH3BT56 DDX39BP2-208ENST00000453923 258 ntBASIC2.36□□□□□ -2.03
CHKB-CPT1BH3BT56 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC2.36□□□□□ -2.03
CHKB-CPT1BH3BT56 AL133445.1-201ENST00000467051 452 ntBASIC2.36□□□□□ -2.03
CHKB-CPT1BH3BT56 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC2.36□□□□□ -2.03
CHKB-CPT1BH3BT56 FTH1P24-201ENST00000503502 462 ntBASIC2.36□□□□□ -2.03
CHKB-CPT1BH3BT56 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC2.36□□□□□ -2.03
CHKB-CPT1BH3BT56 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC2.36□□□□□ -2.03
CHKB-CPT1BH3BT56 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC2.36□□□□□ -2.03
CHKB-CPT1BH3BT56 IQCH-203ENST00000512104 1000 ntTSL 2 BASIC2.36□□□□□ -2.03
CHKB-CPT1BH3BT56 AC010265.1-201ENST00000513509 211 ntBASIC2.36□□□□□ -2.03
CHKB-CPT1BH3BT56 AC022441.2-201ENST00000514113 382 ntTSL 3 BASIC2.36□□□□□ -2.03
CHKB-CPT1BH3BT56 RNU6-943P-201ENST00000516960 98 ntBASIC2.36□□□□□ -2.03
CHKB-CPT1BH3BT56 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
CHKB-CPT1BH3BT56 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
CHKB-CPT1BH3BT56 AC084855.1-201ENST00000528696 572 ntTSL 2 BASIC2.36□□□□□ -2.03
CHKB-CPT1BH3BT56 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC2.36□□□□□ -2.03
CHKB-CPT1BH3BT56 MED21-206ENST00000546323 575 ntTSL 3 BASIC2.36□□□□□ -2.03
CHKB-CPT1BH3BT56 AL049839.1-201ENST00000556151 657 ntBASIC2.36□□□□□ -2.03
CHKB-CPT1BH3BT56 NOP10-202ENST00000557912 436 ntTSL 2 BASIC2.36□□□□□ -2.03
CHKB-CPT1BH3BT56 DPPA2P4-201ENST00000563717 878 ntBASIC2.36□□□□□ -2.03
CHKB-CPT1BH3BT56 AC099489.2-201ENST00000574976 260 ntBASIC2.36□□□□□ -2.03
CHKB-CPT1BH3BT56 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC2.36□□□□□ -2.03
CHKB-CPT1BH3BT56 ADAD1P2-201ENST00000588476 646 ntBASIC2.36□□□□□ -2.03
CHKB-CPT1BH3BT56 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC2.36□□□□□ -2.03
CHKB-CPT1BH3BT56 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC2.36□□□□□ -2.03
CHKB-CPT1BH3BT56 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
CHKB-CPT1BH3BT56 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
CHKB-CPT1BH3BT56 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC2.36□□□□□ -2.03
CHKB-CPT1BH3BT56 AC011453.2-201ENST00000603737 729 ntBASIC2.36□□□□□ -2.03
CHKB-CPT1BH3BT56 AC073137.1-201ENST00000605636 634 ntBASIC2.36□□□□□ -2.03
CHKB-CPT1BH3BT56 AC011816.2-201ENST00000607089 556 ntBASIC2.36□□□□□ -2.03
CHKB-CPT1BH3BT56 RPSAP73-201ENST00000614820 330 ntBASIC2.36□□□□□ -2.03
CHKB-CPT1BH3BT56 CCL23-203ENST00000615050 624 ntAPPRIS P3 TSL 1 (best) BASIC2.36□□□□□ -2.03
CHKB-CPT1BH3BT56 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC2.36□□□□□ -2.03
CHKB-CPT1BH3BT56 AC087821.1-201ENST00000623639 567 ntBASIC2.36□□□□□ -2.03
CHKB-CPT1BH3BT56 AL353662.3-201ENST00000625131 237 ntBASIC2.36□□□□□ -2.03
CHKB-CPT1BH3BT56 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC2.36□□□□□ -2.03
CHKB-CPT1BH3BT56 MIR4278-201ENST00000636094 69 ntBASIC2.36□□□□□ -2.03
CHKB-CPT1BH3BT56 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
CHKB-CPT1BH3BT56 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC2.36□□□□□ -2.03
CHKB-CPT1BH3BT56 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
CHKB-CPT1BH3BT56 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC2.36□□□□□ -2.03
CHKB-CPT1BH3BT56 LINC00561-201ENST00000565815 2738 ntBASIC2.36□□□□□ -2.03
CHKB-CPT1BH3BT56 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
CHKB-CPT1BH3BT56 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC2.36□□□□□ -2.03
CHKB-CPT1BH3BT56 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
CHKB-CPT1BH3BT56 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
CHKB-CPT1BH3BT56 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC2.35□□□□□ -2.03
CHKB-CPT1BH3BT56 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
CHKB-CPT1BH3BT56 AC007496.3-201ENST00000624987 3443 ntBASIC2.35□□□□□ -2.03
CHKB-CPT1BH3BT56 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
CHKB-CPT1BH3BT56 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC2.35□□□□□ -2.03
CHKB-CPT1BH3BT56 AP002001.2-201ENST00000529025 1469 ntBASIC2.35□□□□□ -2.03
CHKB-CPT1BH3BT56 NOL8P1-201ENST00000508336 3529 ntBASIC2.35□□□□□ -2.03
CHKB-CPT1BH3BT56 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
CHKB-CPT1BH3BT56 AL672296.1-201ENST00000427780 2158 ntBASIC2.35□□□□□ -2.03
CHKB-CPT1BH3BT56 RNA5SP167-201ENST00000365461 116 ntBASIC2.35□□□□□ -2.03
CHKB-CPT1BH3BT56 NPL-202ENST00000367552 745 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
CHKB-CPT1BH3BT56 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
CHKB-CPT1BH3BT56 MIR124-3-201ENST00000384866 87 ntBASIC2.35□□□□□ -2.03
CHKB-CPT1BH3BT56 SNORA48.8-201ENST00000391324 134 ntBASIC2.35□□□□□ -2.03
CHKB-CPT1BH3BT56 AL607077.1-201ENST00000401718 499 ntBASIC2.35□□□□□ -2.03
CHKB-CPT1BH3BT56 HMGB1P13-201ENST00000406019 642 ntBASIC2.35□□□□□ -2.03
CHKB-CPT1BH3BT56 MAST4-207ENST00000407621 559 ntTSL 2 BASIC2.35□□□□□ -2.03
CHKB-CPT1BH3BT56 RN7SKP114-201ENST00000410327 279 ntBASIC2.35□□□□□ -2.03
CHKB-CPT1BH3BT56 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC2.35□□□□□ -2.03
CHKB-CPT1BH3BT56 AC002511.2-201ENST00000413796 450 ntTSL 2 BASIC2.35□□□□□ -2.03
CHKB-CPT1BH3BT56 MAP1LC3BP1-201ENST00000417653 379 ntBASIC2.35□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 73.3 ms