Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC4.02□□□□□ -1.77
SRRM4A7MD48 AC009263.1-201ENST00000441193 1239 ntBASIC4.02□□□□□ -1.77
SRRM4A7MD48 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC4.02□□□□□ -1.77
SRRM4A7MD48 RNF2P1-201ENST00000442955 1010 ntBASIC4.02□□□□□ -1.77
SRRM4A7MD48 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC4.02□□□□□ -1.77
SRRM4A7MD48 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC4.02□□□□□ -1.77
SRRM4A7MD48 AC097484.1-201ENST00000471148 389 ntBASIC4.02□□□□□ -1.77
SRRM4A7MD48 COPS8P2-201ENST00000473228 627 ntBASIC4.02□□□□□ -1.77
SRRM4A7MD48 RN7SL799P-201ENST00000475891 298 ntBASIC4.02□□□□□ -1.77
SRRM4A7MD48 RPS4XP6-201ENST00000477670 797 ntBASIC4.02□□□□□ -1.77
SRRM4A7MD48 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC4.02□□□□□ -1.77
SRRM4A7MD48 AC026414.1-201ENST00000504046 698 ntBASIC4.02□□□□□ -1.77
SRRM4A7MD48 NAMPTP2-201ENST00000505629 1115 ntBASIC4.02□□□□□ -1.77
SRRM4A7MD48 AC106872.4-201ENST00000510050 523 ntBASIC4.02□□□□□ -1.77
SRRM4A7MD48 RPL7L1P4-201ENST00000513004 707 ntBASIC4.02□□□□□ -1.77
SRRM4A7MD48 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC4.02□□□□□ -1.77
SRRM4A7MD48 MTATP6P9-201ENST00000515039 680 ntBASIC4.02□□□□□ -1.77
SRRM4A7MD48 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC4.02□□□□□ -1.77
SRRM4A7MD48 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC4.02□□□□□ -1.77
SRRM4A7MD48 MTND5P21-201ENST00000531961 522 ntBASIC4.02□□□□□ -1.77
SRRM4A7MD48 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
SRRM4A7MD48 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC4.02□□□□□ -1.77
SRRM4A7MD48 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC4.02□□□□□ -1.77
SRRM4A7MD48 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
SRRM4A7MD48 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
SRRM4A7MD48 AC110743.1-201ENST00000584870 478 ntBASIC4.02□□□□□ -1.77
SRRM4A7MD48 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC4.02□□□□□ -1.77
SRRM4A7MD48 AC124016.2-201ENST00000610058 665 ntBASIC4.02□□□□□ -1.77
SRRM4A7MD48 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC4.02□□□□□ -1.77
SRRM4A7MD48 AC008115.4-201ENST00000619780 775 ntBASIC4.02□□□□□ -1.77
SRRM4A7MD48 AC022106.2-201ENST00000620114 757 ntBASIC4.02□□□□□ -1.77
SRRM4A7MD48 AC007275.1-201ENST00000621243 671 ntBASIC4.02□□□□□ -1.77
SRRM4A7MD48 AC092608.3-201ENST00000625017 386 ntBASIC4.02□□□□□ -1.77
SRRM4A7MD48 AP001002.2-201ENST00000625137 386 ntBASIC4.02□□□□□ -1.77
SRRM4A7MD48 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC4.02□□□□□ -1.77
SRRM4A7MD48 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC4.02□□□□□ -1.77
SRRM4A7MD48 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC4.02□□□□□ -1.77
SRRM4A7MD48 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC4.02□□□□□ -1.77
SRRM4A7MD48 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
SRRM4A7MD48 MAPK10-304ENST00000641341 3984 ntBASIC4.02□□□□□ -1.77
SRRM4A7MD48 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
SRRM4A7MD48 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC4.02□□□□□ -1.77
SRRM4A7MD48 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC4.02□□□□□ -1.77
SRRM4A7MD48 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.02□□□□□ -1.77
SRRM4A7MD48 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
SRRM4A7MD48 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
SRRM4A7MD48 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
SRRM4A7MD48 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
SRRM4A7MD48 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
SRRM4A7MD48 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
SRRM4A7MD48 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
SRRM4A7MD48 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
SRRM4A7MD48 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC4.01□□□□□ -1.77
SRRM4A7MD48 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC4.01□□□□□ -1.77
SRRM4A7MD48 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC4.01□□□□□ -1.77
SRRM4A7MD48 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC4.01□□□□□ -1.77
SRRM4A7MD48 AP000542.2-201ENST00000623199 6179 ntBASIC4.01□□□□□ -1.77
SRRM4A7MD48 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC4.01□□□□□ -1.77
SRRM4A7MD48 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
SRRM4A7MD48 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
SRRM4A7MD48 DDX18P3-201ENST00000404856 2007 ntBASIC4.01□□□□□ -1.77
SRRM4A7MD48 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
SRRM4A7MD48 RPL22P22-201ENST00000395439 379 ntBASIC4.01□□□□□ -1.77
SRRM4A7MD48 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC4.01□□□□□ -1.77
SRRM4A7MD48 RNU6ATAC21P-201ENST00000408656 126 ntBASIC4.01□□□□□ -1.77
SRRM4A7MD48 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC4.01□□□□□ -1.77
SRRM4A7MD48 AC079355.1-201ENST00000421770 223 ntBASIC4.01□□□□□ -1.77
SRRM4A7MD48 MTND2P9-201ENST00000422293 931 ntBASIC4.01□□□□□ -1.77
SRRM4A7MD48 HSFY1P1-201ENST00000423928 1178 ntBASIC4.01□□□□□ -1.77
SRRM4A7MD48 OR2AH1P-201ENST00000425717 928 ntBASIC4.01□□□□□ -1.77
SRRM4A7MD48 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC4.01□□□□□ -1.77
SRRM4A7MD48 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC4.01□□□□□ -1.77
SRRM4A7MD48 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC4.01□□□□□ -1.77
SRRM4A7MD48 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC4.01□□□□□ -1.77
SRRM4A7MD48 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC4.01□□□□□ -1.77
SRRM4A7MD48 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC4.01□□□□□ -1.77
SRRM4A7MD48 AL645931.1-201ENST00000439737 410 ntBASIC4.01□□□□□ -1.77
SRRM4A7MD48 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC4.01□□□□□ -1.77
SRRM4A7MD48 AC073052.1-201ENST00000440417 714 ntBASIC4.01□□□□□ -1.77
SRRM4A7MD48 RPL34P20-201ENST00000442771 351 ntBASIC4.01□□□□□ -1.77
SRRM4A7MD48 SEPT14P24-201ENST00000447236 180 ntBASIC4.01□□□□□ -1.77
SRRM4A7MD48 HMGN1P5-201ENST00000448591 263 ntBASIC4.01□□□□□ -1.77
SRRM4A7MD48 FAR2P1-206ENST00000449736 709 ntBASIC4.01□□□□□ -1.77
SRRM4A7MD48 RNA5SP103-201ENST00000459503 118 ntBASIC4.01□□□□□ -1.77
SRRM4A7MD48 RN7SL172P-201ENST00000460535 303 ntBASIC4.01□□□□□ -1.77
SRRM4A7MD48 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC4.01□□□□□ -1.77
SRRM4A7MD48 RPL23AP37-201ENST00000479658 549 ntBASIC4.01□□□□□ -1.77
SRRM4A7MD48 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC4.01□□□□□ -1.77
SRRM4A7MD48 AC079841.1-201ENST00000481228 950 ntBASIC4.01□□□□□ -1.77
SRRM4A7MD48 SNRPCP2-201ENST00000504370 475 ntBASIC4.01□□□□□ -1.77
SRRM4A7MD48 AC107918.3-201ENST00000533272 382 ntBASIC4.01□□□□□ -1.77
SRRM4A7MD48 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
SRRM4A7MD48 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC4.01□□□□□ -1.77
SRRM4A7MD48 BNIP3P1-201ENST00000547295 580 ntBASIC4.01□□□□□ -1.77
SRRM4A7MD48 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC4.01□□□□□ -1.77
SRRM4A7MD48 AL390334.1-201ENST00000556395 450 ntBASIC4.01□□□□□ -1.77
SRRM4A7MD48 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC4.01□□□□□ -1.77
SRRM4A7MD48 MIR3176-201ENST00000582210 90 ntBASIC4.01□□□□□ -1.77
SRRM4A7MD48 AC008507.2-201ENST00000588402 1176 ntBASIC4.01□□□□□ -1.77
SRRM4A7MD48 PCNAP1-202ENST00000595299 752 ntBASIC4.01□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms