Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC6.18□□□□□ -1.42
CTDP1Q9Y5B0 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC6.18□□□□□ -1.42
CTDP1Q9Y5B0 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC6.18□□□□□ -1.42
CTDP1Q9Y5B0 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC6.18□□□□□ -1.42
CTDP1Q9Y5B0 AL035411.2-201ENST00000604022 421 ntBASIC6.18□□□□□ -1.42
CTDP1Q9Y5B0 AC009027.1-201ENST00000604510 479 ntBASIC6.18□□□□□ -1.42
CTDP1Q9Y5B0 AC005021.1-201ENST00000608730 355 ntBASIC6.18□□□□□ -1.42
CTDP1Q9Y5B0 VIS1.1-201ENST00000610517 203 ntBASIC6.18□□□□□ -1.42
CTDP1Q9Y5B0 TUSC7.1-201ENST00000610969 165 ntBASIC6.18□□□□□ -1.42
CTDP1Q9Y5B0 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC6.18□□□□□ -1.42
CTDP1Q9Y5B0 AP000676.3-201ENST00000623299 569 ntBASIC6.18□□□□□ -1.42
CTDP1Q9Y5B0 AL049536.1-201ENST00000625043 744 ntBASIC6.18□□□□□ -1.42
CTDP1Q9Y5B0 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC6.18□□□□□ -1.42
CTDP1Q9Y5B0 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC6.18□□□□□ -1.42
CTDP1Q9Y5B0 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
CTDP1Q9Y5B0 FTX-210ENST00000603037 8347 ntTSL 5 BASIC6.18□□□□□ -1.42
CTDP1Q9Y5B0 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
CTDP1Q9Y5B0 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC6.18□□□□□ -1.42
CTDP1Q9Y5B0 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC6.18□□□□□ -1.42
CTDP1Q9Y5B0 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
CTDP1Q9Y5B0 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
CTDP1Q9Y5B0 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
CTDP1Q9Y5B0 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC6.17□□□□□ -1.42
CTDP1Q9Y5B0 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC6.17□□□□□ -1.42
CTDP1Q9Y5B0 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
CTDP1Q9Y5B0 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
CTDP1Q9Y5B0 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC6.17□□□□□ -1.42
CTDP1Q9Y5B0 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC6.17□□□□□ -1.42
CTDP1Q9Y5B0 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
CTDP1Q9Y5B0 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
CTDP1Q9Y5B0 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
CTDP1Q9Y5B0 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
CTDP1Q9Y5B0 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
CTDP1Q9Y5B0 BMS1P3-201ENST00000372011 932 ntBASIC6.17□□□□□ -1.42
CTDP1Q9Y5B0 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
CTDP1Q9Y5B0 HMGB1P10-201ENST00000395823 563 ntBASIC6.17□□□□□ -1.42
CTDP1Q9Y5B0 DNAJA1P3-201ENST00000399417 1194 ntBASIC6.17□□□□□ -1.42
CTDP1Q9Y5B0 RNU6ATAC7P-201ENST00000408111 127 ntBASIC6.17□□□□□ -1.42
CTDP1Q9Y5B0 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
CTDP1Q9Y5B0 AL008987.1-201ENST00000415528 237 ntBASIC6.17□□□□□ -1.42
CTDP1Q9Y5B0 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC6.17□□□□□ -1.42
CTDP1Q9Y5B0 MTND4P3-201ENST00000417829 541 ntBASIC6.17□□□□□ -1.42
CTDP1Q9Y5B0 AL590399.2-201ENST00000427536 309 ntBASIC6.17□□□□□ -1.42
CTDP1Q9Y5B0 MUPP-201ENST00000438111 566 ntBASIC6.17□□□□□ -1.42
CTDP1Q9Y5B0 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC6.17□□□□□ -1.42
CTDP1Q9Y5B0 LINC02210-201ENST00000444561 288 ntBASIC6.17□□□□□ -1.42
CTDP1Q9Y5B0 AL096803.2-201ENST00000450032 677 ntBASIC6.17□□□□□ -1.42
CTDP1Q9Y5B0 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC6.17□□□□□ -1.42
CTDP1Q9Y5B0 AC011037.1-201ENST00000483964 558 ntBASIC6.17□□□□□ -1.42
CTDP1Q9Y5B0 RPS27AP16-201ENST00000492222 470 ntBASIC6.17□□□□□ -1.42
CTDP1Q9Y5B0 AC091951.3-201ENST00000504093 246 ntBASIC6.17□□□□□ -1.42
CTDP1Q9Y5B0 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC6.17□□□□□ -1.42
CTDP1Q9Y5B0 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC6.17□□□□□ -1.42
CTDP1Q9Y5B0 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC6.17□□□□□ -1.42
CTDP1Q9Y5B0 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC6.17□□□□□ -1.42
CTDP1Q9Y5B0 RERGL-202ENST00000536890 367 ntTSL 3 BASIC6.17□□□□□ -1.42
CTDP1Q9Y5B0 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC6.17□□□□□ -1.42
CTDP1Q9Y5B0 AC092490.3-201ENST00000545370 572 ntBASIC6.17□□□□□ -1.42
CTDP1Q9Y5B0 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC6.17□□□□□ -1.42
CTDP1Q9Y5B0 NMNAT1P5-201ENST00000559657 841 ntBASIC6.17□□□□□ -1.42
CTDP1Q9Y5B0 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC6.17□□□□□ -1.42
CTDP1Q9Y5B0 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC6.17□□□□□ -1.42
CTDP1Q9Y5B0 RN7SL356P-201ENST00000582228 248 ntBASIC6.17□□□□□ -1.42
CTDP1Q9Y5B0 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC6.17□□□□□ -1.42
CTDP1Q9Y5B0 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC6.17□□□□□ -1.42
CTDP1Q9Y5B0 AP000769.2-201ENST00000602344 396 ntBASIC6.17□□□□□ -1.42
CTDP1Q9Y5B0 AC009597.2-201ENST00000604659 592 ntBASIC6.17□□□□□ -1.42
CTDP1Q9Y5B0 RMST_5.1-201ENST00000618704 126 ntBASIC6.17□□□□□ -1.42
CTDP1Q9Y5B0 AC123767.1-202ENST00000620407 817 ntBASIC6.17□□□□□ -1.42
CTDP1Q9Y5B0 uc_338.7-201ENST00000621834 124 ntBASIC6.17□□□□□ -1.42
CTDP1Q9Y5B0 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC6.17□□□□□ -1.42
CTDP1Q9Y5B0 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
CTDP1Q9Y5B0 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC6.17□□□□□ -1.42
CTDP1Q9Y5B0 CASC19-281ENST00000642118 1554 ntBASIC6.17□□□□□ -1.42
CTDP1Q9Y5B0 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
CTDP1Q9Y5B0 ABCC13-202ENST00000463099 3842 ntBASIC6.17□□□□□ -1.42
CTDP1Q9Y5B0 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
CTDP1Q9Y5B0 HSPA8P17-201ENST00000427029 1382 ntBASIC6.17□□□□□ -1.42
CTDP1Q9Y5B0 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC6.17□□□□□ -1.42
CTDP1Q9Y5B0 AC005261.4-201ENST00000600047 1385 ntBASIC6.17□□□□□ -1.42
CTDP1Q9Y5B0 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
CTDP1Q9Y5B0 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
CTDP1Q9Y5B0 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
CTDP1Q9Y5B0 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
CTDP1Q9Y5B0 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC6.16□□□□□ -1.42
CTDP1Q9Y5B0 DCN-218ENST00000551354 2924 ntTSL 3 BASIC6.16□□□□□ -1.42
CTDP1Q9Y5B0 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
CTDP1Q9Y5B0 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC6.16□□□□□ -1.42
CTDP1Q9Y5B0 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC6.16□□□□□ -1.42
CTDP1Q9Y5B0 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
CTDP1Q9Y5B0 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
CTDP1Q9Y5B0 MAPK10-338ENST00000641647 3362 ntBASIC6.16□□□□□ -1.42
CTDP1Q9Y5B0 AC015799.1-201ENST00000622996 3122 ntBASIC6.16□□□□□ -1.42
CTDP1Q9Y5B0 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC6.16□□□□□ -1.42
CTDP1Q9Y5B0 SNORD116-9-201ENST00000384000 95 ntBASIC6.16□□□□□ -1.42
CTDP1Q9Y5B0 SNORD116-3-201ENST00000384287 95 ntBASIC6.16□□□□□ -1.42
CTDP1Q9Y5B0 RNU1-106P-201ENST00000384382 164 ntBASIC6.16□□□□□ -1.42
CTDP1Q9Y5B0 SNORD116-7-201ENST00000384404 95 ntBASIC6.16□□□□□ -1.42
CTDP1Q9Y5B0 SNORD116-5-201ENST00000384462 95 ntBASIC6.16□□□□□ -1.42
CTDP1Q9Y5B0 Y_RNA.505-201ENST00000384489 102 ntBASIC6.16□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 86.9 ms