Protein–RNA interactions for Protein: Q9UPZ3

HPS5, Hermansky-Pudlak syndrome 5 protein, humanhuman

Predictions only

Length 1,129 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS5Q9UPZ3 CCR8-201ENST00000326306 1253 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
HPS5Q9UPZ3 FAM183A-201ENST00000335282 488 ntAPPRIS P1 TSL 2 BASIC8.08□□□□□ -1.12
HPS5Q9UPZ3 RNU6-223P-201ENST00000362830 107 ntBASIC8.08□□□□□ -1.12
HPS5Q9UPZ3 Y_RNA.135-201ENST00000363439 95 ntBASIC8.08□□□□□ -1.12
HPS5Q9UPZ3 Y_RNA.148-201ENST00000363557 117 ntBASIC8.08□□□□□ -1.12
HPS5Q9UPZ3 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
HPS5Q9UPZ3 RPL23AP47-201ENST00000408017 460 ntBASIC8.08□□□□□ -1.12
HPS5Q9UPZ3 SNORA77.2-201ENST00000408571 112 ntBASIC8.08□□□□□ -1.12
HPS5Q9UPZ3 HMGB3P2-201ENST00000411913 584 ntBASIC8.08□□□□□ -1.12
HPS5Q9UPZ3 RPS12P24-201ENST00000412619 387 ntBASIC8.08□□□□□ -1.12
HPS5Q9UPZ3 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC8.08□□□□□ -1.12
HPS5Q9UPZ3 Z93242.1-201ENST00000427102 353 ntBASIC8.08□□□□□ -1.12
HPS5Q9UPZ3 AC007365.2-201ENST00000428806 458 ntBASIC8.08□□□□□ -1.12
HPS5Q9UPZ3 NANOGP6-201ENST00000429190 847 ntBASIC8.08□□□□□ -1.12
HPS5Q9UPZ3 RPL23AP50-201ENST00000434149 455 ntBASIC8.08□□□□□ -1.12
HPS5Q9UPZ3 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC8.08□□□□□ -1.12
HPS5Q9UPZ3 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC8.08□□□□□ -1.12
HPS5Q9UPZ3 AC015983.1-201ENST00000441577 373 ntBASIC8.08□□□□□ -1.12
HPS5Q9UPZ3 RPL23AP16-201ENST00000441715 421 ntBASIC8.08□□□□□ -1.12
HPS5Q9UPZ3 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC8.08□□□□□ -1.12
HPS5Q9UPZ3 RN7SL390P-201ENST00000470634 284 ntBASIC8.08□□□□□ -1.12
HPS5Q9UPZ3 AC006539.1-201ENST00000481419 501 ntBASIC8.08□□□□□ -1.12
HPS5Q9UPZ3 AC104564.1-201ENST00000493028 407 ntBASIC8.08□□□□□ -1.12
HPS5Q9UPZ3 RPS4XP14-201ENST00000493072 781 ntBASIC8.08□□□□□ -1.12
HPS5Q9UPZ3 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
HPS5Q9UPZ3 SUMO2P7-201ENST00000511179 285 ntBASIC8.08□□□□□ -1.12
HPS5Q9UPZ3 AC093303.1-201ENST00000514549 295 ntBASIC8.08□□□□□ -1.12
HPS5Q9UPZ3 AC011352.2-201ENST00000514574 1016 ntBASIC8.08□□□□□ -1.12
HPS5Q9UPZ3 MTND5P4-201ENST00000514978 288 ntBASIC8.08□□□□□ -1.12
HPS5Q9UPZ3 SNORD60.2-201ENST00000516883 86 ntBASIC8.08□□□□□ -1.12
HPS5Q9UPZ3 ATP6V0E1-202ENST00000517669 502 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
HPS5Q9UPZ3 PSMA2P1-201ENST00000526365 646 ntBASIC8.08□□□□□ -1.12
HPS5Q9UPZ3 MAL2-203ENST00000534619 578 ntTSL 4 BASIC8.08□□□□□ -1.12
HPS5Q9UPZ3 MIR3614-201ENST00000581261 86 ntBASIC8.08□□□□□ -1.12
HPS5Q9UPZ3 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC8.08□□□□□ -1.12
HPS5Q9UPZ3 AC006262.3-201ENST00000597337 258 ntTSL 3 BASIC8.08□□□□□ -1.12
HPS5Q9UPZ3 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC8.08□□□□□ -1.12
HPS5Q9UPZ3 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC8.08□□□□□ -1.12
HPS5Q9UPZ3 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC8.08□□□□□ -1.12
HPS5Q9UPZ3 CA5B-201ENST00000318636 6835 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
HPS5Q9UPZ3 AL512329.1-201ENST00000404600 1592 ntBASIC8.08□□□□□ -1.12
HPS5Q9UPZ3 MLLT10-202ENST00000377059 4850 ntAPPRIS ALT2 TSL 1 (best) BASIC8.08□□□□□ -1.12
HPS5Q9UPZ3 BCL2L14-201ENST00000266434 2039 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
HPS5Q9UPZ3 AC007359.1-202ENST00000419158 2939 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
HPS5Q9UPZ3 AC008175.1-201ENST00000446299 2939 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
HPS5Q9UPZ3 RUNDC3A-AS1-202ENST00000588097 5203 ntTSL 5 BASIC8.08□□□□□ -1.12
HPS5Q9UPZ3 KPNA6-201ENST00000373625 7378 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
HPS5Q9UPZ3 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC8.08□□□□□ -1.12
HPS5Q9UPZ3 RORA-201ENST00000261523 1951 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
HPS5Q9UPZ3 ELMO1-202ENST00000396040 1982 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
HPS5Q9UPZ3 EBF1-203ENST00000517373 2277 ntTSL 5 BASIC8.08□□□□□ -1.12
HPS5Q9UPZ3 CA10-204ENST00000570565 2276 ntTSL 5 BASIC8.08□□□□□ -1.12
HPS5Q9UPZ3 ARPP21-220ENST00000441454 2880 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
HPS5Q9UPZ3 ANKRD31-201ENST00000274361 6036 ntAPPRIS P2 TSL 5 BASIC8.08□□□□□ -1.12
HPS5Q9UPZ3 NCAPH-205ENST00000455200 2952 ntAPPRIS ALT2 TSL 5 BASIC8.07□□□□□ -1.12
HPS5Q9UPZ3 SH2D1B-201ENST00000367929 2523 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
HPS5Q9UPZ3 SLC12A6-201ENST00000290209 7286 ntAPPRIS P3 TSL 1 (best) BASIC8.07□□□□□ -1.12
HPS5Q9UPZ3 AC090337.1-201ENST00000579651 2074 ntBASIC8.07□□□□□ -1.12
HPS5Q9UPZ3 AMY1A-201ENST00000370083 1790 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
HPS5Q9UPZ3 RALBP1-206ENST00000609094 3676 ntTSL 2 BASIC8.07□□□□□ -1.12
HPS5Q9UPZ3 TCL6-201ENST00000352367 3398 ntTSL 2 BASIC8.07□□□□□ -1.12
HPS5Q9UPZ3 ATP2B4-201ENST00000341360 4658 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
HPS5Q9UPZ3 LINC01613-201ENST00000561476 2780 ntBASIC8.07□□□□□ -1.12
HPS5Q9UPZ3 FCGR1B-210ENST00000623603 1581 ntAPPRIS P2 TSL 1 (best) BASIC8.07□□□□□ -1.12
HPS5Q9UPZ3 AL139805.2-201ENST00000455305 2433 ntBASIC8.07□□□□□ -1.12
HPS5Q9UPZ3 AC073343.1-201ENST00000328239 651 ntBASIC8.07□□□□□ -1.12
HPS5Q9UPZ3 Y_RNA.158-201ENST00000363651 101 ntBASIC8.07□□□□□ -1.12
HPS5Q9UPZ3 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC8.07□□□□□ -1.12
HPS5Q9UPZ3 RNU6-1300P-201ENST00000391046 108 ntBASIC8.07□□□□□ -1.12
HPS5Q9UPZ3 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC8.07□□□□□ -1.12
HPS5Q9UPZ3 AC068138.1-201ENST00000412635 217 ntBASIC8.07□□□□□ -1.12
HPS5Q9UPZ3 MTATP6P18-201ENST00000417994 673 ntBASIC8.07□□□□□ -1.12
HPS5Q9UPZ3 RPS27AP6-201ENST00000427962 448 ntBASIC8.07□□□□□ -1.12
HPS5Q9UPZ3 OR51AB1P-201ENST00000429046 620 ntBASIC8.07□□□□□ -1.12
HPS5Q9UPZ3 CBX1P1-201ENST00000440184 427 ntBASIC8.07□□□□□ -1.12
HPS5Q9UPZ3 DSCAM-IT1-201ENST00000440363 720 ntTSL 3 BASIC8.07□□□□□ -1.12
HPS5Q9UPZ3 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC8.07□□□□□ -1.12
HPS5Q9UPZ3 AC073522.1-201ENST00000483312 377 ntBASIC8.07□□□□□ -1.12
HPS5Q9UPZ3 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC8.07□□□□□ -1.12
HPS5Q9UPZ3 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC8.07□□□□□ -1.12
HPS5Q9UPZ3 PCBP2P3-201ENST00000509726 843 ntBASIC8.07□□□□□ -1.12
HPS5Q9UPZ3 AC009812.2-201ENST00000517657 457 ntBASIC8.07□□□□□ -1.12
HPS5Q9UPZ3 COX6B1P4-201ENST00000519826 484 ntBASIC8.07□□□□□ -1.12
HPS5Q9UPZ3 AC022075.2-201ENST00000535911 562 ntTSL 4 BASIC8.07□□□□□ -1.12
HPS5Q9UPZ3 C14orf119-202ENST00000554203 725 ntAPPRIS P1 TSL 2 BASIC8.07□□□□□ -1.12
HPS5Q9UPZ3 AC026464.5-201ENST00000562497 722 ntBASIC8.07□□□□□ -1.12
HPS5Q9UPZ3 RPL29P33-201ENST00000587474 316 ntBASIC8.07□□□□□ -1.12
HPS5Q9UPZ3 APOC2-205ENST00000592257 444 ntTSL 3 BASIC8.07□□□□□ -1.12
HPS5Q9UPZ3 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
HPS5Q9UPZ3 AP004607.9-201ENST00000618202 316 ntBASIC8.07□□□□□ -1.12
HPS5Q9UPZ3 AC099494.2-201ENST00000623371 978 ntBASIC8.07□□□□□ -1.12
HPS5Q9UPZ3 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC8.07□□□□□ -1.12
HPS5Q9UPZ3 AC062029.1-202ENST00000606164 3651 ntBASIC8.07□□□□□ -1.12
HPS5Q9UPZ3 AHI1-204ENST00000367800 5921 ntAPPRIS P2 TSL 1 (best) BASIC8.07□□□□□ -1.12
HPS5Q9UPZ3 AC126323.2-201ENST00000559985 2369 ntTSL 5 BASIC8.07□□□□□ -1.12
HPS5Q9UPZ3 AC096992.2-201ENST00000609553 1684 ntBASIC8.07□□□□□ -1.12
HPS5Q9UPZ3 MAP3K13-201ENST00000265026 9876 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
HPS5Q9UPZ3 CLEC2D-203ENST00000290855 5279 ntAPPRIS P3 TSL 1 (best) BASIC8.07□□□□□ -1.12
HPS5Q9UPZ3 LINC02197-201ENST00000502659 2767 ntTSL 2 BASIC8.07□□□□□ -1.12
HPS5Q9UPZ3 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC8.07□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 97.2 ms