Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC7.78□□□□□ -1.16
ZC3H4Q9UPT8 RNA5SP34-201ENST00000516887 130 ntBASIC7.78□□□□□ -1.16
ZC3H4Q9UPT8 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC7.78□□□□□ -1.16
ZC3H4Q9UPT8 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC7.78□□□□□ -1.16
ZC3H4Q9UPT8 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC7.78□□□□□ -1.16
ZC3H4Q9UPT8 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC7.78□□□□□ -1.16
ZC3H4Q9UPT8 AL390726.5-202ENST00000564800 256 ntBASIC7.78□□□□□ -1.16
ZC3H4Q9UPT8 ZNF322P1-201ENST00000568013 1209 ntBASIC7.78□□□□□ -1.16
ZC3H4Q9UPT8 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC7.78□□□□□ -1.16
ZC3H4Q9UPT8 AC015917.1-201ENST00000579654 510 ntBASIC7.78□□□□□ -1.16
ZC3H4Q9UPT8 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC7.78□□□□□ -1.16
ZC3H4Q9UPT8 AC020916.2-201ENST00000591242 360 ntBASIC7.78□□□□□ -1.16
ZC3H4Q9UPT8 AC010463.3-201ENST00000594077 500 ntBASIC7.78□□□□□ -1.16
ZC3H4Q9UPT8 COX6CP7-201ENST00000597056 208 ntBASIC7.78□□□□□ -1.16
ZC3H4Q9UPT8 AC115286.1-201ENST00000604298 434 ntBASIC7.78□□□□□ -1.16
ZC3H4Q9UPT8 BNIP3P10-201ENST00000605360 577 ntBASIC7.78□□□□□ -1.16
ZC3H4Q9UPT8 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
ZC3H4Q9UPT8 AP005431.1-201ENST00000618479 319 ntBASIC7.78□□□□□ -1.16
ZC3H4Q9UPT8 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC7.78□□□□□ -1.16
ZC3H4Q9UPT8 AC006065.6-201ENST00000625201 545 ntBASIC7.78□□□□□ -1.16
ZC3H4Q9UPT8 CYP1D1P-201ENST00000416662 1433 ntBASIC7.77□□□□□ -1.16
ZC3H4Q9UPT8 RBM25-201ENST00000261973 6910 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.16
ZC3H4Q9UPT8 MROH3P-201ENST00000435735 2676 ntBASIC7.77□□□□□ -1.16
ZC3H4Q9UPT8 MBNL3-206ENST00000394311 11263 ntTSL 2 BASIC7.77□□□□□ -1.16
ZC3H4Q9UPT8 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC7.77□□□□□ -1.17
ZC3H4Q9UPT8 TMEM68-219ENST00000617977 4512 ntTSL 5 BASIC7.77□□□□□ -1.17
ZC3H4Q9UPT8 FOCAD-216ENST00000605086 4195 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
ZC3H4Q9UPT8 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
ZC3H4Q9UPT8 PHLDB2-201ENST00000393923 5673 ntTSL 2 BASIC7.77□□□□□ -1.17
ZC3H4Q9UPT8 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC7.77□□□□□ -1.17
ZC3H4Q9UPT8 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC7.77□□□□□ -1.17
ZC3H4Q9UPT8 SMAD1-202ENST00000394092 1658 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
ZC3H4Q9UPT8 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
ZC3H4Q9UPT8 AC015871.3-201ENST00000618835 2261 ntBASIC7.77□□□□□ -1.17
ZC3H4Q9UPT8 DNM1L-203ENST00000381000 4397 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
ZC3H4Q9UPT8 UTP14C-201ENST00000521776 5529 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
ZC3H4Q9UPT8 CAST-203ENST00000338252 2972 ntAPPRIS ALT2 TSL 1 (best) BASIC7.77□□□□□ -1.17
ZC3H4Q9UPT8 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC7.77□□□□□ -1.17
ZC3H4Q9UPT8 OR2T33-202ENST00000641220 4118 ntAPPRIS P1 BASIC7.77□□□□□ -1.17
ZC3H4Q9UPT8 CD300E-201ENST00000392619 3501 ntAPPRIS P2 TSL 1 (best) BASIC7.77□□□□□ -1.17
ZC3H4Q9UPT8 MECOM-203ENST00000460814 3374 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
ZC3H4Q9UPT8 PIGN-238ENST00000639758 4239 ntTSL 5 BASIC7.77□□□□□ -1.17
ZC3H4Q9UPT8 NDC80-201ENST00000261597 2172 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
ZC3H4Q9UPT8 RSF1-201ENST00000308488 11550 ntAPPRIS P2 TSL 1 (best) BASIC7.77□□□□□ -1.17
ZC3H4Q9UPT8 GABRR1-206ENST00000611484 3259 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
ZC3H4Q9UPT8 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC7.77□□□□□ -1.17
ZC3H4Q9UPT8 RNU1-150P-201ENST00000362491 162 ntBASIC7.77□□□□□ -1.17
ZC3H4Q9UPT8 SNORD16-201ENST00000362803 99 ntBASIC7.77□□□□□ -1.17
ZC3H4Q9UPT8 Y_RNA.97-201ENST00000363094 102 ntBASIC7.77□□□□□ -1.17
ZC3H4Q9UPT8 RNA5SP132-201ENST00000364725 118 ntBASIC7.77□□□□□ -1.17
ZC3H4Q9UPT8 MT-TP-201ENST00000387461 68 ntBASIC7.77□□□□□ -1.17
ZC3H4Q9UPT8 RPS24P12-201ENST00000402084 394 ntBASIC7.77□□□□□ -1.17
ZC3H4Q9UPT8 ZNF90P2-204ENST00000419323 1075 ntBASIC7.77□□□□□ -1.17
ZC3H4Q9UPT8 DPY19L1P2-201ENST00000426647 915 ntBASIC7.77□□□□□ -1.17
ZC3H4Q9UPT8 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
ZC3H4Q9UPT8 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC7.77□□□□□ -1.17
ZC3H4Q9UPT8 AC017006.2-201ENST00000444077 464 ntTSL 5 BASIC7.77□□□□□ -1.17
ZC3H4Q9UPT8 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC7.77□□□□□ -1.17
ZC3H4Q9UPT8 TRBV8-2-201ENST00000475637 270 ntBASIC7.77□□□□□ -1.17
ZC3H4Q9UPT8 RPS14P8-201ENST00000478778 369 ntBASIC7.77□□□□□ -1.17
ZC3H4Q9UPT8 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC7.77□□□□□ -1.17
ZC3H4Q9UPT8 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC7.77□□□□□ -1.17
ZC3H4Q9UPT8 AC112225.1-201ENST00000508230 297 ntBASIC7.77□□□□□ -1.17
ZC3H4Q9UPT8 AC114781.3-201ENST00000512083 142 ntBASIC7.77□□□□□ -1.17
ZC3H4Q9UPT8 MTND5P4-201ENST00000514978 288 ntBASIC7.77□□□□□ -1.17
ZC3H4Q9UPT8 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC7.77□□□□□ -1.17
ZC3H4Q9UPT8 AL121821.2-201ENST00000556081 394 ntBASIC7.77□□□□□ -1.17
ZC3H4Q9UPT8 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC7.77□□□□□ -1.17
ZC3H4Q9UPT8 AP005230.1-203ENST00000582086 887 ntTSL 2 BASIC7.77□□□□□ -1.17
ZC3H4Q9UPT8 AC087575.1-201ENST00000585087 229 ntBASIC7.77□□□□□ -1.17
ZC3H4Q9UPT8 AC010928.3-201ENST00000587712 541 ntBASIC7.77□□□□□ -1.17
ZC3H4Q9UPT8 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
ZC3H4Q9UPT8 ZNF549-204ENST00000602149 5505 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
ZC3H4Q9UPT8 AP001429.1-201ENST00000602568 530 ntBASIC7.77□□□□□ -1.17
ZC3H4Q9UPT8 IGLVIVOR22-1-201ENST00000603243 397 ntBASIC7.77□□□□□ -1.17
ZC3H4Q9UPT8 AC112191.3-201ENST00000604371 277 ntBASIC7.77□□□□□ -1.17
ZC3H4Q9UPT8 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC7.77□□□□□ -1.17
ZC3H4Q9UPT8 AL645937.1-201ENST00000641739 1652 ntBASIC7.76□□□□□ -1.17
ZC3H4Q9UPT8 AC107021.2-201ENST00000567714 2095 ntBASIC7.76□□□□□ -1.17
ZC3H4Q9UPT8 PSEN1-201ENST00000324501 6078 ntAPPRIS P4 TSL 1 (best) BASIC7.76□□□□□ -1.17
ZC3H4Q9UPT8 ATP1A1-203ENST00000369496 3572 ntTSL 2 BASIC7.76□□□□□ -1.17
ZC3H4Q9UPT8 DLC1-215ENST00000520226 3556 ntTSL 2 BASIC7.76□□□□□ -1.17
ZC3H4Q9UPT8 DCP2-201ENST00000389063 8947 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
ZC3H4Q9UPT8 AC090229.1-201ENST00000590983 1609 ntBASIC7.76□□□□□ -1.17
ZC3H4Q9UPT8 MPP7-201ENST00000337532 5080 ntAPPRIS P1 TSL 5 BASIC7.76□□□□□ -1.17
ZC3H4Q9UPT8 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
ZC3H4Q9UPT8 AC104837.1-201ENST00000444644 1587 ntBASIC7.76□□□□□ -1.17
ZC3H4Q9UPT8 ABLIM1-214ENST00000533213 7606 ntTSL 5 BASIC7.76□□□□□ -1.17
ZC3H4Q9UPT8 ZRANB3-202ENST00000401392 6820 ntAPPRIS ALT2 TSL 1 (best) BASIC7.76□□□□□ -1.17
ZC3H4Q9UPT8 ALB-214ENST00000509063 1911 ntTSL 5 BASIC7.76□□□□□ -1.17
ZC3H4Q9UPT8 FAM32BP-201ENST00000344033 333 ntBASIC7.76□□□□□ -1.17
ZC3H4Q9UPT8 SNORA21-201ENST00000362423 132 ntBASIC7.76□□□□□ -1.17
ZC3H4Q9UPT8 RNA5SP65-201ENST00000363166 119 ntBASIC7.76□□□□□ -1.17
ZC3H4Q9UPT8 RNU6-1085P-201ENST00000363576 107 ntBASIC7.76□□□□□ -1.17
ZC3H4Q9UPT8 Y_RNA.326-201ENST00000365176 113 ntBASIC7.76□□□□□ -1.17
ZC3H4Q9UPT8 TMSB4XP8-201ENST00000402089 135 ntBASIC7.76□□□□□ -1.17
ZC3H4Q9UPT8 TMSB4XP6-201ENST00000415187 135 ntBASIC7.76□□□□□ -1.17
ZC3H4Q9UPT8 RPL36P18-201ENST00000419316 318 ntBASIC7.76□□□□□ -1.17
ZC3H4Q9UPT8 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC7.76□□□□□ -1.17
ZC3H4Q9UPT8 TMSB4XP1-201ENST00000424567 135 ntBASIC7.76□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 81 ms