Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC5.46□□□□□ -1.54
SCN11AQ9UI33 YPEL5P3-201ENST00000547227 352 ntBASIC5.46□□□□□ -1.54
SCN11AQ9UI33 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC5.46□□□□□ -1.54
SCN11AQ9UI33 AC053481.4-201ENST00000583164 216 ntBASIC5.46□□□□□ -1.54
SCN11AQ9UI33 AC022106.2-201ENST00000620114 757 ntBASIC5.46□□□□□ -1.54
SCN11AQ9UI33 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
SCN11AQ9UI33 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
SCN11AQ9UI33 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
SCN11AQ9UI33 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC5.46□□□□□ -1.54
SCN11AQ9UI33 ERCC6-202ENST00000374127 1782 ntBASIC5.45□□□□□ -1.54
SCN11AQ9UI33 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
SCN11AQ9UI33 LINC01362-202ENST00000452901 1712 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
SCN11AQ9UI33 RNU11-4P-201ENST00000391149 133 ntBASIC5.45□□□□□ -1.54
SCN11AQ9UI33 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC5.45□□□□□ -1.54
SCN11AQ9UI33 AL139039.2-201ENST00000407436 479 ntBASIC5.45□□□□□ -1.54
SCN11AQ9UI33 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC5.45□□□□□ -1.54
SCN11AQ9UI33 AC091959.2-201ENST00000477363 321 ntBASIC5.45□□□□□ -1.54
SCN11AQ9UI33 DSTNP2-201ENST00000504533 515 ntBASIC5.45□□□□□ -1.54
SCN11AQ9UI33 PARP4P3-201ENST00000510265 317 ntBASIC5.45□□□□□ -1.54
SCN11AQ9UI33 GTF2IP22-201ENST00000554443 182 ntBASIC5.45□□□□□ -1.54
SCN11AQ9UI33 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC5.45□□□□□ -1.54
SCN11AQ9UI33 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC5.45□□□□□ -1.54
SCN11AQ9UI33 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
SCN11AQ9UI33 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
SCN11AQ9UI33 AP002512.4-202ENST00000641599 4530 ntBASIC5.45□□□□□ -1.54
SCN11AQ9UI33 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
SCN11AQ9UI33 AL627171.1-201ENST00000618845 1308 ntBASIC5.45□□□□□ -1.54
SCN11AQ9UI33 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC5.44□□□□□ -1.54
SCN11AQ9UI33 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC5.44□□□□□ -1.54
SCN11AQ9UI33 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC5.44□□□□□ -1.54
SCN11AQ9UI33 AC015871.5-202ENST00000623252 701 ntBASIC5.44□□□□□ -1.54
SCN11AQ9UI33 AP003400.2-201ENST00000624036 666 ntBASIC5.44□□□□□ -1.54
SCN11AQ9UI33 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC5.44□□□□□ -1.54
SCN11AQ9UI33 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC5.44□□□□□ -1.54
SCN11AQ9UI33 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
SCN11AQ9UI33 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC5.44□□□□□ -1.54
SCN11AQ9UI33 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
SCN11AQ9UI33 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
SCN11AQ9UI33 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC5.44□□□□□ -1.54
SCN11AQ9UI33 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
SCN11AQ9UI33 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
SCN11AQ9UI33 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
SCN11AQ9UI33 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC5.44□□□□□ -1.54
SCN11AQ9UI33 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
SCN11AQ9UI33 SLC2A3P1-201ENST00000519666 1451 ntBASIC5.44□□□□□ -1.54
SCN11AQ9UI33 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC5.44□□□□□ -1.54
SCN11AQ9UI33 RNA5SP124-201ENST00000362739 110 ntBASIC5.44□□□□□ -1.54
SCN11AQ9UI33 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC5.44□□□□□ -1.54
SCN11AQ9UI33 SNORD96B-201ENST00000386148 79 ntBASIC5.44□□□□□ -1.54
SCN11AQ9UI33 EIF4EBP2P3-201ENST00000403144 334 ntBASIC5.44□□□□□ -1.54
SCN11AQ9UI33 AL450992.3-201ENST00000413192 568 ntBASIC5.44□□□□□ -1.54
SCN11AQ9UI33 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC5.44□□□□□ -1.54
SCN11AQ9UI33 EIF1P3-201ENST00000423841 334 ntBASIC5.44□□□□□ -1.54
SCN11AQ9UI33 HMGN2P27-201ENST00000427352 270 ntBASIC5.44□□□□□ -1.54
SCN11AQ9UI33 BX119904.3-201ENST00000428194 957 ntBASIC5.44□□□□□ -1.54
SCN11AQ9UI33 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC5.44□□□□□ -1.54
SCN11AQ9UI33 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC5.44□□□□□ -1.54
SCN11AQ9UI33 AC006499.6-201ENST00000511169 607 ntBASIC5.44□□□□□ -1.54
SCN11AQ9UI33 OSBPL9P2-201ENST00000526582 1228 ntBASIC5.44□□□□□ -1.54
SCN11AQ9UI33 OR4A2P-201ENST00000527276 913 ntBASIC5.44□□□□□ -1.54
SCN11AQ9UI33 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC5.44□□□□□ -1.54
SCN11AQ9UI33 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC5.44□□□□□ -1.54
SCN11AQ9UI33 AL121834.1-201ENST00000572284 509 ntBASIC5.44□□□□□ -1.54
SCN11AQ9UI33 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC5.44□□□□□ -1.54
SCN11AQ9UI33 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC5.44□□□□□ -1.54
SCN11AQ9UI33 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC5.44□□□□□ -1.54
SCN11AQ9UI33 AC010608.2-201ENST00000624830 470 ntBASIC5.44□□□□□ -1.54
SCN11AQ9UI33 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
SCN11AQ9UI33 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
SCN11AQ9UI33 EEF1A1P42-201ENST00000613436 1331 ntBASIC5.43□□□□□ -1.54
SCN11AQ9UI33 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
SCN11AQ9UI33 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
SCN11AQ9UI33 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
SCN11AQ9UI33 SNORA63.1-201ENST00000362493 131 ntBASIC5.43□□□□□ -1.54
SCN11AQ9UI33 RN7SKP186-201ENST00000365371 303 ntBASIC5.43□□□□□ -1.54
SCN11AQ9UI33 RNA5SP22-201ENST00000365393 109 ntBASIC5.43□□□□□ -1.54
SCN11AQ9UI33 HSPE1P12-201ENST00000412576 301 ntBASIC5.43□□□□□ -1.54
SCN11AQ9UI33 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
SCN11AQ9UI33 AL358472.1-201ENST00000431295 329 ntBASIC5.43□□□□□ -1.54
SCN11AQ9UI33 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
SCN11AQ9UI33 PRSS3P4-201ENST00000453323 162 ntBASIC5.43□□□□□ -1.54
SCN11AQ9UI33 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC5.43□□□□□ -1.54
SCN11AQ9UI33 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC5.43□□□□□ -1.54
SCN11AQ9UI33 AC007991.1-201ENST00000522680 631 ntBASIC5.43□□□□□ -1.54
SCN11AQ9UI33 AC006064.5-201ENST00000541782 248 ntBASIC5.43□□□□□ -1.54
SCN11AQ9UI33 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
SCN11AQ9UI33 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
SCN11AQ9UI33 HSPD1P14-201ENST00000432666 1618 ntBASIC5.43□□□□□ -1.54
SCN11AQ9UI33 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
SCN11AQ9UI33 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC5.43□□□□□ -1.54
SCN11AQ9UI33 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC5.43□□□□□ -1.54
SCN11AQ9UI33 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
SCN11AQ9UI33 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
SCN11AQ9UI33 SNORA62.3-201ENST00000365110 153 ntBASIC5.42□□□□□ -1.54
SCN11AQ9UI33 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC5.42□□□□□ -1.54
SCN11AQ9UI33 MIR1271-201ENST00000408537 86 ntBASIC5.42□□□□□ -1.54
SCN11AQ9UI33 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC5.42□□□□□ -1.54
SCN11AQ9UI33 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC5.42□□□□□ -1.54
SCN11AQ9UI33 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC5.42□□□□□ -1.54
SCN11AQ9UI33 RPS11P1-201ENST00000451072 473 ntBASIC5.42□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 82.2 ms