Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
HDAC6Q9UBN7 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC5.52□□□□□ -1.53
HDAC6Q9UBN7 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
HDAC6Q9UBN7 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC5.52□□□□□ -1.53
HDAC6Q9UBN7 TMEM161BP1-201ENST00000457388 1457 ntBASIC5.51□□□□□ -1.53
HDAC6Q9UBN7 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
HDAC6Q9UBN7 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
HDAC6Q9UBN7 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
HDAC6Q9UBN7 AL022322.2-201ENST00000624072 20397 ntBASIC5.51□□□□□ -1.53
HDAC6Q9UBN7 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
HDAC6Q9UBN7 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
HDAC6Q9UBN7 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC5.51□□□□□ -1.53
HDAC6Q9UBN7 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
HDAC6Q9UBN7 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
HDAC6Q9UBN7 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
HDAC6Q9UBN7 AL034403.1-201ENST00000399414 885 ntBASIC5.51□□□□□ -1.53
HDAC6Q9UBN7 AL035079.1-201ENST00000405210 287 ntBASIC5.51□□□□□ -1.53
HDAC6Q9UBN7 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC5.51□□□□□ -1.53
HDAC6Q9UBN7 IGKV1OR9-1-201ENST00000424370 284 ntBASIC5.51□□□□□ -1.53
HDAC6Q9UBN7 C4BPAP2-201ENST00000428434 478 ntBASIC5.51□□□□□ -1.53
HDAC6Q9UBN7 AC068287.1-201ENST00000430283 295 ntBASIC5.51□□□□□ -1.53
HDAC6Q9UBN7 AC091390.1-201ENST00000433904 331 ntBASIC5.51□□□□□ -1.53
HDAC6Q9UBN7 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC5.51□□□□□ -1.53
HDAC6Q9UBN7 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC5.51□□□□□ -1.53
HDAC6Q9UBN7 RNFT1P2-201ENST00000443064 757 ntBASIC5.51□□□□□ -1.53
HDAC6Q9UBN7 AC010733.1-201ENST00000451515 401 ntBASIC5.51□□□□□ -1.53
HDAC6Q9UBN7 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
HDAC6Q9UBN7 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC5.51□□□□□ -1.53
HDAC6Q9UBN7 RPL5P13-201ENST00000462840 709 ntBASIC5.51□□□□□ -1.53
HDAC6Q9UBN7 AC018635.1-201ENST00000468292 1030 ntBASIC5.51□□□□□ -1.53
HDAC6Q9UBN7 NDUFA5P9-201ENST00000472609 340 ntBASIC5.51□□□□□ -1.53
HDAC6Q9UBN7 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
HDAC6Q9UBN7 HPRT1P1-201ENST00000509498 657 ntBASIC5.51□□□□□ -1.53
HDAC6Q9UBN7 AC108120.2-201ENST00000512973 294 ntBASIC5.51□□□□□ -1.53
HDAC6Q9UBN7 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC5.51□□□□□ -1.53
HDAC6Q9UBN7 RN7SKP276-201ENST00000516242 268 ntBASIC5.51□□□□□ -1.53
HDAC6Q9UBN7 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC5.51□□□□□ -1.53
HDAC6Q9UBN7 SOX5P1-201ENST00000524155 1127 ntBASIC5.51□□□□□ -1.53
HDAC6Q9UBN7 AC104687.2-201ENST00000604442 342 ntBASIC5.51□□□□□ -1.53
HDAC6Q9UBN7 AC012557.1-201ENST00000607115 611 ntBASIC5.51□□□□□ -1.53
HDAC6Q9UBN7 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC5.51□□□□□ -1.53
HDAC6Q9UBN7 AC016597.2-201ENST00000613256 341 ntBASIC5.51□□□□□ -1.53
HDAC6Q9UBN7 AC104763.3-201ENST00000613765 618 ntBASIC5.51□□□□□ -1.53
HDAC6Q9UBN7 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
HDAC6Q9UBN7 AC009269.6-201ENST00000621778 588 ntBASIC5.51□□□□□ -1.53
HDAC6Q9UBN7 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC5.51□□□□□ -1.53
HDAC6Q9UBN7 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC5.51□□□□□ -1.53
HDAC6Q9UBN7 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC5.51□□□□□ -1.53
HDAC6Q9UBN7 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC5.51□□□□□ -1.53
HDAC6Q9UBN7 Z98755.1-201ENST00000407015 1384 ntBASIC5.51□□□□□ -1.53
HDAC6Q9UBN7 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
HDAC6Q9UBN7 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
HDAC6Q9UBN7 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
HDAC6Q9UBN7 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
HDAC6Q9UBN7 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC5.5□□□□□ -1.53
HDAC6Q9UBN7 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
HDAC6Q9UBN7 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
HDAC6Q9UBN7 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
HDAC6Q9UBN7 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
HDAC6Q9UBN7 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
HDAC6Q9UBN7 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC5.5□□□□□ -1.53
HDAC6Q9UBN7 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
HDAC6Q9UBN7 AC233289.1-201ENST00000403700 508 ntBASIC5.5□□□□□ -1.53
HDAC6Q9UBN7 SNORA79B-201ENST00000410557 148 ntBASIC5.5□□□□□ -1.53
HDAC6Q9UBN7 AC007738.1-201ENST00000413892 348 ntBASIC5.5□□□□□ -1.53
HDAC6Q9UBN7 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
HDAC6Q9UBN7 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC5.5□□□□□ -1.53
HDAC6Q9UBN7 SFR1P2-201ENST00000421841 730 ntBASIC5.5□□□□□ -1.53
HDAC6Q9UBN7 RPL34P6-201ENST00000432390 345 ntBASIC5.5□□□□□ -1.53
HDAC6Q9UBN7 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC5.5□□□□□ -1.53
HDAC6Q9UBN7 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC5.5□□□□□ -1.53
HDAC6Q9UBN7 RPL35AP21-201ENST00000437667 333 ntBASIC5.5□□□□□ -1.53
HDAC6Q9UBN7 NPM1P33-201ENST00000438918 872 ntBASIC5.5□□□□□ -1.53
HDAC6Q9UBN7 MTCYBP12-201ENST00000440559 1134 ntBASIC5.5□□□□□ -1.53
HDAC6Q9UBN7 AC023512.1-201ENST00000444513 499 ntBASIC5.5□□□□□ -1.53
HDAC6Q9UBN7 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC5.5□□□□□ -1.53
HDAC6Q9UBN7 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC5.5□□□□□ -1.53
HDAC6Q9UBN7 SLC25A18P1-201ENST00000449385 454 ntBASIC5.5□□□□□ -1.53
HDAC6Q9UBN7 RPL7P55-201ENST00000450522 746 ntBASIC5.5□□□□□ -1.53
HDAC6Q9UBN7 AC234781.3-201ENST00000452540 973 ntBASIC5.5□□□□□ -1.53
HDAC6Q9UBN7 HMGB1P4-201ENST00000455362 567 ntBASIC5.5□□□□□ -1.53
HDAC6Q9UBN7 AC091180.1-201ENST00000462104 372 ntBASIC5.5□□□□□ -1.53
HDAC6Q9UBN7 SSR3-206ENST00000476217 807 ntTSL 3 BASIC5.5□□□□□ -1.53
HDAC6Q9UBN7 AC093267.1-201ENST00000489176 961 ntBASIC5.5□□□□□ -1.53
HDAC6Q9UBN7 AC121161.1-201ENST00000510606 652 ntBASIC5.5□□□□□ -1.53
HDAC6Q9UBN7 RNA5SP392-201ENST00000516905 112 ntBASIC5.5□□□□□ -1.53
HDAC6Q9UBN7 AC105031.1-201ENST00000518550 476 ntBASIC5.5□□□□□ -1.53
HDAC6Q9UBN7 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC5.5□□□□□ -1.53
HDAC6Q9UBN7 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
HDAC6Q9UBN7 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC5.5□□□□□ -1.53
HDAC6Q9UBN7 TVP23CP2-201ENST00000571473 623 ntBASIC5.5□□□□□ -1.53
HDAC6Q9UBN7 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC5.5□□□□□ -1.53
HDAC6Q9UBN7 AC124283.4-201ENST00000581815 456 ntBASIC5.5□□□□□ -1.53
HDAC6Q9UBN7 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC5.5□□□□□ -1.53
HDAC6Q9UBN7 AC068020.1-201ENST00000594215 661 ntBASIC5.5□□□□□ -1.53
HDAC6Q9UBN7 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC5.5□□□□□ -1.53
HDAC6Q9UBN7 AC130352.1-201ENST00000602979 661 ntBASIC5.5□□□□□ -1.53
HDAC6Q9UBN7 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC5.5□□□□□ -1.53
HDAC6Q9UBN7 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC5.5□□□□□ -1.53
HDAC6Q9UBN7 AC015914.2-201ENST00000618167 288 ntBASIC5.5□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 157.9 ms