Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
NDE1Q9NXR1 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.49□□□□□ -1.69
NDE1Q9NXR1 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
NDE1Q9NXR1 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
NDE1Q9NXR1 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.49□□□□□ -1.69
NDE1Q9NXR1 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.49□□□□□ -1.69
NDE1Q9NXR1 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
NDE1Q9NXR1 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
NDE1Q9NXR1 AC112255.1-201ENST00000624070 2493 ntBASIC4.49□□□□□ -1.69
NDE1Q9NXR1 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
NDE1Q9NXR1 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
NDE1Q9NXR1 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
NDE1Q9NXR1 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC4.48□□□□□ -1.69
NDE1Q9NXR1 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
NDE1Q9NXR1 AC016588.2-201ENST00000632484 3021 ntBASIC4.48□□□□□ -1.69
NDE1Q9NXR1 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
NDE1Q9NXR1 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC4.48□□□□□ -1.69
NDE1Q9NXR1 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.48□□□□□ -1.69
NDE1Q9NXR1 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.48□□□□□ -1.69
NDE1Q9NXR1 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
NDE1Q9NXR1 AL133243.3-201ENST00000617415 3004 ntBASIC4.48□□□□□ -1.69
NDE1Q9NXR1 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
NDE1Q9NXR1 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
NDE1Q9NXR1 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
NDE1Q9NXR1 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
NDE1Q9NXR1 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC4.48□□□□□ -1.69
NDE1Q9NXR1 SNORD115-48-201ENST00000364764 76 ntBASIC4.48□□□□□ -1.69
NDE1Q9NXR1 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
NDE1Q9NXR1 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
NDE1Q9NXR1 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
NDE1Q9NXR1 GCNT6-201ENST00000379591 934 ntBASIC4.48□□□□□ -1.69
NDE1Q9NXR1 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
NDE1Q9NXR1 IPPKP1-201ENST00000422501 768 ntBASIC4.48□□□□□ -1.69
NDE1Q9NXR1 RPS29P14-201ENST00000431518 171 ntBASIC4.48□□□□□ -1.69
NDE1Q9NXR1 HSFY7P-201ENST00000432672 318 ntBASIC4.48□□□□□ -1.69
NDE1Q9NXR1 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
NDE1Q9NXR1 HSFY8P-201ENST00000437934 318 ntBASIC4.48□□□□□ -1.69
NDE1Q9NXR1 AL357520.1-201ENST00000441557 453 ntBASIC4.48□□□□□ -1.69
NDE1Q9NXR1 AL161636.2-201ENST00000445179 927 ntBASIC4.48□□□□□ -1.69
NDE1Q9NXR1 EIF4A1P6-201ENST00000448133 1210 ntBASIC4.48□□□□□ -1.69
NDE1Q9NXR1 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC4.48□□□□□ -1.69
NDE1Q9NXR1 AC104306.1-201ENST00000449702 371 ntBASIC4.48□□□□□ -1.69
NDE1Q9NXR1 AL451050.1-201ENST00000450126 415 ntBASIC4.48□□□□□ -1.69
NDE1Q9NXR1 HSFY5P-201ENST00000453726 309 ntBASIC4.48□□□□□ -1.69
NDE1Q9NXR1 HSPE1P22-201ENST00000456856 327 ntBASIC4.48□□□□□ -1.69
NDE1Q9NXR1 AC090142.1-201ENST00000465776 462 ntBASIC4.48□□□□□ -1.69
NDE1Q9NXR1 STRADBP1-201ENST00000478954 1281 ntBASIC4.48□□□□□ -1.69
NDE1Q9NXR1 RN7SL319P-201ENST00000480656 221 ntBASIC4.48□□□□□ -1.69
NDE1Q9NXR1 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC4.48□□□□□ -1.69
NDE1Q9NXR1 RPL7P51-201ENST00000490532 749 ntBASIC4.48□□□□□ -1.69
NDE1Q9NXR1 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
NDE1Q9NXR1 AC010468.3-201ENST00000508225 458 ntBASIC4.48□□□□□ -1.69
NDE1Q9NXR1 NDUFB4P12-201ENST00000513465 390 ntBASIC4.48□□□□□ -1.69
NDE1Q9NXR1 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC4.48□□□□□ -1.69
NDE1Q9NXR1 MTCYBP19-201ENST00000517463 1124 ntBASIC4.48□□□□□ -1.69
NDE1Q9NXR1 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC4.48□□□□□ -1.69
NDE1Q9NXR1 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC4.48□□□□□ -1.69
NDE1Q9NXR1 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC4.48□□□□□ -1.69
NDE1Q9NXR1 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC4.48□□□□□ -1.69
NDE1Q9NXR1 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC4.48□□□□□ -1.69
NDE1Q9NXR1 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC4.48□□□□□ -1.69
NDE1Q9NXR1 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.48□□□□□ -1.69
NDE1Q9NXR1 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC4.48□□□□□ -1.69
NDE1Q9NXR1 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC4.48□□□□□ -1.69
NDE1Q9NXR1 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC4.48□□□□□ -1.69
NDE1Q9NXR1 AC015911.5-201ENST00000587076 451 ntBASIC4.48□□□□□ -1.69
NDE1Q9NXR1 AC011487.3-201ENST00000593607 453 ntBASIC4.48□□□□□ -1.69
NDE1Q9NXR1 ZNF92P2-201ENST00000600543 1059 ntBASIC4.48□□□□□ -1.69
NDE1Q9NXR1 AL138721.1-201ENST00000616756 179 ntBASIC4.48□□□□□ -1.69
NDE1Q9NXR1 RMST_5.1-201ENST00000618704 126 ntBASIC4.48□□□□□ -1.69
NDE1Q9NXR1 AC091905.2-201ENST00000623143 306 ntBASIC4.48□□□□□ -1.69
NDE1Q9NXR1 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4.48□□□□□ -1.69
NDE1Q9NXR1 BMS1P21-201ENST00000634565 365 ntBASIC4.48□□□□□ -1.69
NDE1Q9NXR1 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.48□□□□□ -1.69
NDE1Q9NXR1 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
NDE1Q9NXR1 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
NDE1Q9NXR1 AL356317.1-201ENST00000396110 1436 ntBASIC4.47□□□□□ -1.69
NDE1Q9NXR1 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
NDE1Q9NXR1 ANKRD20A10P-201ENST00000457591 1515 ntBASIC4.47□□□□□ -1.69
NDE1Q9NXR1 AC011266.1-201ENST00000624119 3569 ntBASIC4.47□□□□□ -1.69
NDE1Q9NXR1 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC4.47□□□□□ -1.69
NDE1Q9NXR1 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
NDE1Q9NXR1 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
NDE1Q9NXR1 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC4.47□□□□□ -1.69
NDE1Q9NXR1 RNU6-178P-201ENST00000384631 104 ntBASIC4.47□□□□□ -1.69
NDE1Q9NXR1 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
NDE1Q9NXR1 FCF1P5-201ENST00000406490 482 ntBASIC4.47□□□□□ -1.69
NDE1Q9NXR1 AL353692.2-201ENST00000407054 335 ntBASIC4.47□□□□□ -1.69
NDE1Q9NXR1 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC4.47□□□□□ -1.69
NDE1Q9NXR1 AC114755.2-201ENST00000413520 361 ntBASIC4.47□□□□□ -1.69
NDE1Q9NXR1 ATP6V1G1P7-201ENST00000415853 349 ntBASIC4.47□□□□□ -1.69
NDE1Q9NXR1 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC4.47□□□□□ -1.69
NDE1Q9NXR1 GAPDHP49-201ENST00000421421 961 ntBASIC4.47□□□□□ -1.69
NDE1Q9NXR1 AL121882.1-201ENST00000422893 417 ntBASIC4.47□□□□□ -1.69
NDE1Q9NXR1 MORF4L1P7-201ENST00000426038 703 ntBASIC4.47□□□□□ -1.69
NDE1Q9NXR1 AC073335.1-201ENST00000427776 363 ntBASIC4.47□□□□□ -1.69
NDE1Q9NXR1 RPL7L1P9-201ENST00000431298 745 ntBASIC4.47□□□□□ -1.69
NDE1Q9NXR1 AC007563.3-201ENST00000433233 371 ntBASIC4.47□□□□□ -1.69
NDE1Q9NXR1 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC4.47□□□□□ -1.69
NDE1Q9NXR1 RPL23AP19-201ENST00000436229 369 ntBASIC4.47□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 126.8 ms