Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 MIR514A3-201ENST00000385132 88 ntBASIC8.94□□□□□ -0.98
RTN4Q9NQC3 TRAV20-201ENST00000390448 406 ntAPPRIS P1 BASIC8.94□□□□□ -0.98
RTN4Q9NQC3 SNORA57.2-201ENST00000391265 128 ntBASIC8.94□□□□□ -0.98
RTN4Q9NQC3 AL122016.1-201ENST00000403365 367 ntBASIC8.94□□□□□ -0.98
RTN4Q9NQC3 NAP1L1P2-201ENST00000414182 1089 ntBASIC8.94□□□□□ -0.98
RTN4Q9NQC3 AL133482.1-201ENST00000415988 498 ntBASIC8.94□□□□□ -0.98
RTN4Q9NQC3 AL137014.1-201ENST00000420490 1226 ntBASIC8.94□□□□□ -0.98
RTN4Q9NQC3 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC8.94□□□□□ -0.98
RTN4Q9NQC3 Z98949.3-201ENST00000436423 472 ntTSL 5 BASIC8.94□□□□□ -0.98
RTN4Q9NQC3 AC005094.1-201ENST00000440420 368 ntBASIC8.94□□□□□ -0.98
RTN4Q9NQC3 TRAPPC2P3-201ENST00000443200 321 ntBASIC8.94□□□□□ -0.98
RTN4Q9NQC3 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
RTN4Q9NQC3 AC135721.1-201ENST00000497954 479 ntBASIC8.94□□□□□ -0.98
RTN4Q9NQC3 RNU6-64P-201ENST00000517119 105 ntBASIC8.94□□□□□ -0.98
RTN4Q9NQC3 EIF5AL1-201ENST00000520547 3840 ntAPPRIS P1 BASIC8.94□□□□□ -0.98
RTN4Q9NQC3 LINC02237-201ENST00000521753 805 ntTSL 3 BASIC8.94□□□□□ -0.98
RTN4Q9NQC3 AC012574.1-201ENST00000523874 252 ntTSL 5 BASIC8.94□□□□□ -0.98
RTN4Q9NQC3 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC8.94□□□□□ -0.98
RTN4Q9NQC3 AC006927.1-201ENST00000544818 498 ntBASIC8.94□□□□□ -0.98
RTN4Q9NQC3 TMEM106C-212ENST00000549288 321 ntTSL 3 BASIC8.94□□□□□ -0.98
RTN4Q9NQC3 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC8.94□□□□□ -0.98
RTN4Q9NQC3 AC139085.1-201ENST00000582716 182 ntBASIC8.94□□□□□ -0.98
RTN4Q9NQC3 VDAC1P5-201ENST00000603132 844 ntBASIC8.94□□□□□ -0.98
RTN4Q9NQC3 AC087763.1-201ENST00000603391 286 ntBASIC8.94□□□□□ -0.98
RTN4Q9NQC3 AC090948.1-201ENST00000607464 549 ntBASIC8.94□□□□□ -0.98
RTN4Q9NQC3 AC000068.3-201ENST00000607934 427 ntBASIC8.94□□□□□ -0.98
RTN4Q9NQC3 AC093388.1-201ENST00000609166 430 ntBASIC8.94□□□□□ -0.98
RTN4Q9NQC3 AC018926.2-201ENST00000611214 498 ntBASIC8.94□□□□□ -0.98
RTN4Q9NQC3 AL731556.2-201ENST00000615610 770 ntBASIC8.94□□□□□ -0.98
RTN4Q9NQC3 AL160413.1-201ENST00000622780 310 ntBASIC8.94□□□□□ -0.98
RTN4Q9NQC3 MIR4275-201ENST00000636486 87 ntBASIC8.94□□□□□ -0.98
RTN4Q9NQC3 RAB11A-201ENST00000261890 4930 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
RTN4Q9NQC3 ABLIM1-202ENST00000369252 7690 ntTSL 5 BASIC8.94□□□□□ -0.98
RTN4Q9NQC3 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
RTN4Q9NQC3 AC022893.2-201ENST00000564832 3296 ntBASIC8.94□□□□□ -0.98
RTN4Q9NQC3 IBTK-210ENST00000610980 5195 ntTSL 5 BASIC8.94□□□□□ -0.98
RTN4Q9NQC3 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
RTN4Q9NQC3 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
RTN4Q9NQC3 ATP5S-202ENST00000311459 10212 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
RTN4Q9NQC3 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
RTN4Q9NQC3 LINC01011-204ENST00000605901 1573 ntTSL 2 BASIC8.94□□□□□ -0.98
RTN4Q9NQC3 SELE-201ENST00000333360 3857 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
RTN4Q9NQC3 BDNF-203ENST00000395978 3988 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
RTN4Q9NQC3 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
RTN4Q9NQC3 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
RTN4Q9NQC3 DDX10P1-201ENST00000448545 1933 ntBASIC8.93□□□□□ -0.98
RTN4Q9NQC3 EXOC5P1-201ENST00000510543 1969 ntBASIC8.93□□□□□ -0.98
RTN4Q9NQC3 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
RTN4Q9NQC3 FMO4-201ENST00000367749 2252 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
RTN4Q9NQC3 AC093535.2-201ENST00000624769 2326 ntBASIC8.93□□□□□ -0.98
RTN4Q9NQC3 MME-203ENST00000460393 5622 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
RTN4Q9NQC3 ZNF559-ZNF177-203ENST00000541595 2435 ntAPPRIS P3 TSL 2 BASIC8.93□□□□□ -0.98
RTN4Q9NQC3 NCOR1-204ENST00000395851 7950 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
RTN4Q9NQC3 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
RTN4Q9NQC3 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC8.93□□□□□ -0.98
RTN4Q9NQC3 STK31-205ENST00000433467 3085 ntTSL 2 BASIC8.93□□□□□ -0.98
RTN4Q9NQC3 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC8.93□□□□□ -0.98
RTN4Q9NQC3 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC8.93□□□□□ -0.98
RTN4Q9NQC3 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
RTN4Q9NQC3 SPINK6-201ENST00000325630 686 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
RTN4Q9NQC3 LEMD1-201ENST00000367149 604 ntTSL 3 BASIC8.93□□□□□ -0.98
RTN4Q9NQC3 Y_RNA.384-201ENST00000383909 102 ntBASIC8.93□□□□□ -0.98
RTN4Q9NQC3 IGHV2-5-201ENST00000390597 378 ntAPPRIS P1 BASIC8.93□□□□□ -0.98
RTN4Q9NQC3 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC8.93□□□□□ -0.98
RTN4Q9NQC3 RPL5P35-201ENST00000398869 816 ntBASIC8.93□□□□□ -0.98
RTN4Q9NQC3 DBIP1-201ENST00000401435 260 ntBASIC8.93□□□□□ -0.98
RTN4Q9NQC3 SYNE1-AS1-201ENST00000412161 553 ntTSL 2 BASIC8.93□□□□□ -0.98
RTN4Q9NQC3 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC8.93□□□□□ -0.98
RTN4Q9NQC3 CYP4F32P-201ENST00000426492 504 ntBASIC8.93□□□□□ -0.98
RTN4Q9NQC3 AL807761.3-201ENST00000427833 329 ntTSL 3 BASIC8.93□□□□□ -0.98
RTN4Q9NQC3 AL683807.1-201ENST00000427886 445 ntTSL 2 BASIC8.93□□□□□ -0.98
RTN4Q9NQC3 AL359265.2-201ENST00000434367 631 ntBASIC8.93□□□□□ -0.98
RTN4Q9NQC3 TRAPPC2P9-201ENST00000434556 343 ntBASIC8.93□□□□□ -0.98
RTN4Q9NQC3 AL159166.1-201ENST00000437430 329 ntTSL 3 BASIC8.93□□□□□ -0.98
RTN4Q9NQC3 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC8.93□□□□□ -0.98
RTN4Q9NQC3 MRPL50P4-201ENST00000446432 475 ntBASIC8.93□□□□□ -0.98
RTN4Q9NQC3 RPL23AP43-201ENST00000446445 471 ntBASIC8.93□□□□□ -0.98
RTN4Q9NQC3 RPL29P29-201ENST00000448725 423 ntBASIC8.93□□□□□ -0.98
RTN4Q9NQC3 AC012501.1-201ENST00000454312 555 ntTSL 4 BASIC8.93□□□□□ -0.98
RTN4Q9NQC3 YAP1P2-201ENST00000455104 610 ntBASIC8.93□□□□□ -0.98
RTN4Q9NQC3 AC002368.1-201ENST00000456981 388 ntTSL 3 BASIC8.93□□□□□ -0.98
RTN4Q9NQC3 C1orf105-204ENST00000460397 462 ntTSL 3 BASIC8.93□□□□□ -0.98
RTN4Q9NQC3 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC8.93□□□□□ -0.98
RTN4Q9NQC3 AC104031.1-201ENST00000527726 372 ntTSL 2 BASIC8.93□□□□□ -0.98
RTN4Q9NQC3 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC8.93□□□□□ -0.98
RTN4Q9NQC3 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC8.93□□□□□ -0.98
RTN4Q9NQC3 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC8.93□□□□□ -0.98
RTN4Q9NQC3 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC8.93□□□□□ -0.98
RTN4Q9NQC3 COX5AP2-201ENST00000554418 394 ntBASIC8.93□□□□□ -0.98
RTN4Q9NQC3 AL161713.1-201ENST00000555538 145 ntBASIC8.93□□□□□ -0.98
RTN4Q9NQC3 AC138907.5-201ENST00000561744 273 ntTSL 5 BASIC8.93□□□□□ -0.98
RTN4Q9NQC3 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC8.93□□□□□ -0.98
RTN4Q9NQC3 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC8.93□□□□□ -0.98
RTN4Q9NQC3 AP002505.1-201ENST00000592655 228 ntTSL 5 BASIC8.93□□□□□ -0.98
RTN4Q9NQC3 AL645949.1-202ENST00000600073 242 ntBASIC8.93□□□□□ -0.98
RTN4Q9NQC3 RNU6-89P-201ENST00000606519 100 ntBASIC8.93□□□□□ -0.98
RTN4Q9NQC3 MIR1302-1-201ENST00000637932 143 ntBASIC8.93□□□□□ -0.98
RTN4Q9NQC3 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC8.93□□□□□ -0.98
RTN4Q9NQC3 GABPAP-201ENST00000419271 1356 ntBASIC8.93□□□□□ -0.98
RTN4Q9NQC3 ACTR3BP5-201ENST00000448440 1479 ntBASIC8.93□□□□□ -0.98
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms