Protein–RNA interactions for Protein: Q9BYV6

TRIM55, Tripartite motif-containing protein 55, humanhuman

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55Q9BYV6 AC022447.1-201ENST00000515358 464 ntBASIC6.12□□□□□ -1.43
TRIM55Q9BYV6 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC6.12□□□□□ -1.43
TRIM55Q9BYV6 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC6.12□□□□□ -1.43
TRIM55Q9BYV6 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC6.12□□□□□ -1.43
TRIM55Q9BYV6 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC6.12□□□□□ -1.43
TRIM55Q9BYV6 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC6.12□□□□□ -1.43
TRIM55Q9BYV6 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
TRIM55Q9BYV6 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC6.12□□□□□ -1.43
TRIM55Q9BYV6 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC6.12□□□□□ -1.43
TRIM55Q9BYV6 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
TRIM55Q9BYV6 AC008759.1-201ENST00000589783 983 ntBASIC6.12□□□□□ -1.43
TRIM55Q9BYV6 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
TRIM55Q9BYV6 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC6.12□□□□□ -1.43
TRIM55Q9BYV6 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC6.12□□□□□ -1.43
TRIM55Q9BYV6 AC092184.1-201ENST00000625042 715 ntBASIC6.12□□□□□ -1.43
TRIM55Q9BYV6 AC129915.3-201ENST00000634128 948 ntBASIC6.12□□□□□ -1.43
TRIM55Q9BYV6 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC6.12□□□□□ -1.43
TRIM55Q9BYV6 SMG1P5-202ENST00000529428 4219 ntBASIC6.12□□□□□ -1.43
TRIM55Q9BYV6 SMG1P2-201ENST00000566127 4221 ntBASIC6.12□□□□□ -1.43
TRIM55Q9BYV6 ATP8B5P-203ENST00000430846 3962 ntTSL 2 BASIC6.12□□□□□ -1.43
TRIM55Q9BYV6 ESF1-201ENST00000202816 3216 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
TRIM55Q9BYV6 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC6.12□□□□□ -1.43
TRIM55Q9BYV6 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
TRIM55Q9BYV6 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
TRIM55Q9BYV6 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC6.11□□□□□ -1.43
TRIM55Q9BYV6 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC6.11□□□□□ -1.43
TRIM55Q9BYV6 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
TRIM55Q9BYV6 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
TRIM55Q9BYV6 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC6.11□□□□□ -1.43
TRIM55Q9BYV6 ATP8A2P3-201ENST00000426792 1536 ntBASIC6.11□□□□□ -1.43
TRIM55Q9BYV6 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
TRIM55Q9BYV6 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
TRIM55Q9BYV6 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
TRIM55Q9BYV6 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
TRIM55Q9BYV6 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
TRIM55Q9BYV6 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
TRIM55Q9BYV6 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
TRIM55Q9BYV6 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
TRIM55Q9BYV6 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC6.11□□□□□ -1.43
TRIM55Q9BYV6 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC6.11□□□□□ -1.43
TRIM55Q9BYV6 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
TRIM55Q9BYV6 MIR133A2-201ENST00000347538 102 ntBASIC6.11□□□□□ -1.43
TRIM55Q9BYV6 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
TRIM55Q9BYV6 OR5H15-201ENST00000383696 930 ntBASIC6.11□□□□□ -1.43
TRIM55Q9BYV6 AL078604.1-201ENST00000404609 466 ntBASIC6.11□□□□□ -1.43
TRIM55Q9BYV6 RN7SKP281-201ENST00000410472 352 ntBASIC6.11□□□□□ -1.43
TRIM55Q9BYV6 AC002524.1-201ENST00000411687 547 ntBASIC6.11□□□□□ -1.43
TRIM55Q9BYV6 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC6.11□□□□□ -1.43
TRIM55Q9BYV6 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC6.11□□□□□ -1.43
TRIM55Q9BYV6 AC093698.1-201ENST00000423843 571 ntBASIC6.11□□□□□ -1.43
TRIM55Q9BYV6 AC083862.1-201ENST00000427378 1242 ntBASIC6.11□□□□□ -1.43
TRIM55Q9BYV6 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC6.11□□□□□ -1.43
TRIM55Q9BYV6 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC6.11□□□□□ -1.43
TRIM55Q9BYV6 YWHAZP8-201ENST00000436935 731 ntBASIC6.11□□□□□ -1.43
TRIM55Q9BYV6 AMYP1-201ENST00000440059 1023 ntBASIC6.11□□□□□ -1.43
TRIM55Q9BYV6 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC6.11□□□□□ -1.43
TRIM55Q9BYV6 ELOCP30-201ENST00000447108 299 ntBASIC6.11□□□□□ -1.43
TRIM55Q9BYV6 OR52J1P-201ENST00000450596 932 ntBASIC6.11□□□□□ -1.43
TRIM55Q9BYV6 RPL26P28-201ENST00000451325 435 ntBASIC6.11□□□□□ -1.43
TRIM55Q9BYV6 HMGN3P1-201ENST00000453847 193 ntBASIC6.11□□□□□ -1.43
TRIM55Q9BYV6 USP9YP10-201ENST00000454868 628 ntBASIC6.11□□□□□ -1.43
TRIM55Q9BYV6 RANP2-201ENST00000456833 229 ntBASIC6.11□□□□□ -1.43
TRIM55Q9BYV6 GM2AP2-201ENST00000491764 562 ntBASIC6.11□□□□□ -1.43
TRIM55Q9BYV6 MTCYBP17-201ENST00000503579 789 ntBASIC6.11□□□□□ -1.43
TRIM55Q9BYV6 AC023794.2-201ENST00000504891 528 ntTSL 3 BASIC6.11□□□□□ -1.43
TRIM55Q9BYV6 AC006499.5-201ENST00000505037 514 ntBASIC6.11□□□□□ -1.43
TRIM55Q9BYV6 USP9YP5-201ENST00000511770 630 ntBASIC6.11□□□□□ -1.43
TRIM55Q9BYV6 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC6.11□□□□□ -1.43
TRIM55Q9BYV6 ZNF519P4-201ENST00000514008 125 ntBASIC6.11□□□□□ -1.43
TRIM55Q9BYV6 GAPDHP62-201ENST00000515313 990 ntBASIC6.11□□□□□ -1.43
TRIM55Q9BYV6 SOD1P3-201ENST00000518682 454 ntBASIC6.11□□□□□ -1.43
TRIM55Q9BYV6 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC6.11□□□□□ -1.43
TRIM55Q9BYV6 AC008802.1-201ENST00000519121 791 ntBASIC6.11□□□□□ -1.43
TRIM55Q9BYV6 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC6.11□□□□□ -1.43
TRIM55Q9BYV6 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC6.11□□□□□ -1.43
TRIM55Q9BYV6 MTCYBP20-201ENST00000524239 1129 ntBASIC6.11□□□□□ -1.43
TRIM55Q9BYV6 AP000873.5-201ENST00000533906 236 ntBASIC6.11□□□□□ -1.43
TRIM55Q9BYV6 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC6.11□□□□□ -1.43
TRIM55Q9BYV6 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC6.11□□□□□ -1.43
TRIM55Q9BYV6 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC6.11□□□□□ -1.43
TRIM55Q9BYV6 EIF5A2P1-201ENST00000564027 460 ntBASIC6.11□□□□□ -1.43
TRIM55Q9BYV6 AGGF1P4-201ENST00000568249 801 ntBASIC6.11□□□□□ -1.43
TRIM55Q9BYV6 ANKRD36BP2-206ENST00000575193 1245 ntBASIC6.11□□□□□ -1.43
TRIM55Q9BYV6 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC6.11□□□□□ -1.43
TRIM55Q9BYV6 AC026898.1-201ENST00000586404 571 ntBASIC6.11□□□□□ -1.43
TRIM55Q9BYV6 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC6.11□□□□□ -1.43
TRIM55Q9BYV6 AL589863.1-201ENST00000595383 631 ntBASIC6.11□□□□□ -1.43
TRIM55Q9BYV6 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC6.11□□□□□ -1.43
TRIM55Q9BYV6 AC068790.6-201ENST00000602558 258 ntBASIC6.11□□□□□ -1.43
TRIM55Q9BYV6 AP001521.1-201ENST00000609150 300 ntBASIC6.11□□□□□ -1.43
TRIM55Q9BYV6 AC079228.1-201ENST00000624774 1049 ntBASIC6.11□□□□□ -1.43
TRIM55Q9BYV6 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
TRIM55Q9BYV6 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
TRIM55Q9BYV6 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
TRIM55Q9BYV6 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
TRIM55Q9BYV6 AC138907.8-201ENST00000623981 2256 ntBASIC6.11□□□□□ -1.43
TRIM55Q9BYV6 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
TRIM55Q9BYV6 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
TRIM55Q9BYV6 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
TRIM55Q9BYV6 AC024651.2-201ENST00000562480 2098 ntBASIC6.11□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 76.9 ms