Protein–RNA interactions for Protein: Q9BYV2

TRIM54, Tripartite motif-containing protein 54, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54Q9BYV2 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC5.37□□□□□ -1.55
TRIM54Q9BYV2 BPTFP1-201ENST00000579209 492 ntBASIC5.37□□□□□ -1.55
TRIM54Q9BYV2 MIR4505-201ENST00000582238 73 ntBASIC5.37□□□□□ -1.55
TRIM54Q9BYV2 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC5.37□□□□□ -1.55
TRIM54Q9BYV2 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC5.37□□□□□ -1.55
TRIM54Q9BYV2 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC5.37□□□□□ -1.55
TRIM54Q9BYV2 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC5.37□□□□□ -1.55
TRIM54Q9BYV2 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC5.37□□□□□ -1.55
TRIM54Q9BYV2 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC5.37□□□□□ -1.55
TRIM54Q9BYV2 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC5.37□□□□□ -1.55
TRIM54Q9BYV2 AC107075.1-201ENST00000613695 314 ntBASIC5.37□□□□□ -1.55
TRIM54Q9BYV2 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC5.37□□□□□ -1.55
TRIM54Q9BYV2 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
TRIM54Q9BYV2 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
TRIM54Q9BYV2 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC5.37□□□□□ -1.55
TRIM54Q9BYV2 AC091305.2-201ENST00000624049 1576 ntBASIC5.37□□□□□ -1.55
TRIM54Q9BYV2 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC5.37□□□□□ -1.55
TRIM54Q9BYV2 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
TRIM54Q9BYV2 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
TRIM54Q9BYV2 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
TRIM54Q9BYV2 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
TRIM54Q9BYV2 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC5.37□□□□□ -1.55
TRIM54Q9BYV2 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC5.36□□□□□ -1.55
TRIM54Q9BYV2 MAPK6PS2-201ENST00000379571 2060 ntBASIC5.36□□□□□ -1.55
TRIM54Q9BYV2 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC5.36□□□□□ -1.55
TRIM54Q9BYV2 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.36□□□□□ -1.55
TRIM54Q9BYV2 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
TRIM54Q9BYV2 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
TRIM54Q9BYV2 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC5.36□□□□□ -1.55
TRIM54Q9BYV2 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC5.36□□□□□ -1.55
TRIM54Q9BYV2 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC5.36□□□□□ -1.55
TRIM54Q9BYV2 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
TRIM54Q9BYV2 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC5.36□□□□□ -1.55
TRIM54Q9BYV2 HMGB1P5-201ENST00000255320 642 ntBASIC5.36□□□□□ -1.55
TRIM54Q9BYV2 OR5H2-201ENST00000355273 945 ntBASIC5.36□□□□□ -1.55
TRIM54Q9BYV2 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
TRIM54Q9BYV2 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
TRIM54Q9BYV2 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
TRIM54Q9BYV2 CDC123-202ENST00000378900 933 ntTSL 5 BASIC5.36□□□□□ -1.55
TRIM54Q9BYV2 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC5.36□□□□□ -1.55
TRIM54Q9BYV2 TMSB4XP8-201ENST00000402089 135 ntBASIC5.36□□□□□ -1.55
TRIM54Q9BYV2 TMSB4XP6-201ENST00000415187 135 ntBASIC5.36□□□□□ -1.55
TRIM54Q9BYV2 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC5.36□□□□□ -1.55
TRIM54Q9BYV2 GTF2IP23-201ENST00000423746 351 ntBASIC5.36□□□□□ -1.55
TRIM54Q9BYV2 TMSB4XP1-201ENST00000424567 135 ntBASIC5.36□□□□□ -1.55
TRIM54Q9BYV2 RPL21P43-201ENST00000425440 472 ntBASIC5.36□□□□□ -1.55
TRIM54Q9BYV2 AC073069.1-201ENST00000428657 441 ntBASIC5.36□□□□□ -1.55
TRIM54Q9BYV2 TXNL1P1-201ENST00000429528 554 ntBASIC5.36□□□□□ -1.55
TRIM54Q9BYV2 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC5.36□□□□□ -1.55
TRIM54Q9BYV2 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC5.36□□□□□ -1.55
TRIM54Q9BYV2 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC5.36□□□□□ -1.55
TRIM54Q9BYV2 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC5.36□□□□□ -1.55
TRIM54Q9BYV2 AC073143.1-201ENST00000436316 395 ntBASIC5.36□□□□□ -1.55
TRIM54Q9BYV2 AL138899.2-201ENST00000439139 499 ntBASIC5.36□□□□□ -1.55
TRIM54Q9BYV2 AC092809.1-201ENST00000441469 474 ntBASIC5.36□□□□□ -1.55
TRIM54Q9BYV2 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC5.36□□□□□ -1.55
TRIM54Q9BYV2 RPL31P15-201ENST00000449770 338 ntBASIC5.36□□□□□ -1.55
TRIM54Q9BYV2 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC5.36□□□□□ -1.55
TRIM54Q9BYV2 PRDX3P4-201ENST00000470828 747 ntBASIC5.36□□□□□ -1.55
TRIM54Q9BYV2 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
TRIM54Q9BYV2 AC104971.1-201ENST00000495117 578 ntBASIC5.36□□□□□ -1.55
TRIM54Q9BYV2 AC021193.1-201ENST00000511607 420 ntBASIC5.36□□□□□ -1.55
TRIM54Q9BYV2 MTND6P2-201ENST00000512226 524 ntBASIC5.36□□□□□ -1.55
TRIM54Q9BYV2 Y_RNA.688-201ENST00000516565 95 ntBASIC5.36□□□□□ -1.55
TRIM54Q9BYV2 SCARNA16.4-201ENST00000516956 187 ntBASIC5.36□□□□□ -1.55
TRIM54Q9BYV2 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC5.36□□□□□ -1.55
TRIM54Q9BYV2 COX6B1P6-201ENST00000522347 255 ntBASIC5.36□□□□□ -1.55
TRIM54Q9BYV2 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
TRIM54Q9BYV2 PDCL2P2-201ENST00000533651 189 ntBASIC5.36□□□□□ -1.55
TRIM54Q9BYV2 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC5.36□□□□□ -1.55
TRIM54Q9BYV2 AC125611.1-201ENST00000549563 229 ntBASIC5.36□□□□□ -1.55
TRIM54Q9BYV2 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC5.36□□□□□ -1.55
TRIM54Q9BYV2 AL132657.2-201ENST00000564417 358 ntBASIC5.36□□□□□ -1.55
TRIM54Q9BYV2 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC5.36□□□□□ -1.55
TRIM54Q9BYV2 AP005403.1-201ENST00000579720 229 ntBASIC5.36□□□□□ -1.55
TRIM54Q9BYV2 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC5.36□□□□□ -1.55
TRIM54Q9BYV2 AC012616.1-201ENST00000600294 197 ntBASIC5.36□□□□□ -1.55
TRIM54Q9BYV2 GMFG-212ENST00000602185 423 ntTSL 3 BASIC5.36□□□□□ -1.55
TRIM54Q9BYV2 HCG18-243ENST00000602498 327 ntTSL 3 BASIC5.36□□□□□ -1.55
TRIM54Q9BYV2 Z94722.1-201ENST00000604328 474 ntBASIC5.36□□□□□ -1.55
TRIM54Q9BYV2 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
TRIM54Q9BYV2 AL157770.1-201ENST00000623049 439 ntBASIC5.36□□□□□ -1.55
TRIM54Q9BYV2 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC5.36□□□□□ -1.55
TRIM54Q9BYV2 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC5.36□□□□□ -1.55
TRIM54Q9BYV2 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC5.36□□□□□ -1.55
TRIM54Q9BYV2 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
TRIM54Q9BYV2 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC5.36□□□□□ -1.55
TRIM54Q9BYV2 PHACTR2P1-201ENST00000605639 1414 ntBASIC5.36□□□□□ -1.55
TRIM54Q9BYV2 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC5.36□□□□□ -1.55
TRIM54Q9BYV2 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
TRIM54Q9BYV2 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC5.36□□□□□ -1.55
TRIM54Q9BYV2 CD86-204ENST00000469710 1604 ntTSL 2 BASIC5.36□□□□□ -1.55
TRIM54Q9BYV2 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
TRIM54Q9BYV2 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
TRIM54Q9BYV2 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
TRIM54Q9BYV2 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
TRIM54Q9BYV2 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC5.35□□□□□ -1.55
TRIM54Q9BYV2 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
TRIM54Q9BYV2 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC5.35□□□□□ -1.55
TRIM54Q9BYV2 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 76.9 ms