Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 AP001784.1-201ENST00000624107 428 ntBASIC6.78□□□□□ -1.32
COL25A1Q9BXS0 AC079597.1-201ENST00000624306 508 ntBASIC6.78□□□□□ -1.32
COL25A1Q9BXS0 AL691477.1-201ENST00000624398 162 ntBASIC6.78□□□□□ -1.32
COL25A1Q9BXS0 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC6.78□□□□□ -1.32
COL25A1Q9BXS0 AL133216.2-202ENST00000634512 349 ntBASIC6.78□□□□□ -1.32
COL25A1Q9BXS0 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC6.78□□□□□ -1.32
COL25A1Q9BXS0 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC6.78□□□□□ -1.32
COL25A1Q9BXS0 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC6.78□□□□□ -1.32
COL25A1Q9BXS0 FGD4-202ENST00000427716 8242 ntAPPRIS P1 TSL 2 BASIC6.78□□□□□ -1.32
COL25A1Q9BXS0 PAX8-AS1-201ENST00000333145 2319 ntTSL 2 BASIC6.78□□□□□ -1.32
COL25A1Q9BXS0 ZNF334-201ENST00000347606 3890 ntAPPRIS P3 TSL 1 (best) BASIC6.78□□□□□ -1.32
COL25A1Q9BXS0 CCDC77-203ENST00000422000 2338 ntAPPRIS ALT2 TSL 5 BASIC6.78□□□□□ -1.32
COL25A1Q9BXS0 RASGRP3-202ENST00000403687 4807 ntAPPRIS P3 TSL 1 (best) BASIC6.78□□□□□ -1.32
COL25A1Q9BXS0 C14orf37-201ENST00000267485 6495 ntAPPRIS P2 TSL 1 (best) BASIC6.78□□□□□ -1.32
COL25A1Q9BXS0 FREM2-201ENST00000280481 16070 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
COL25A1Q9BXS0 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
COL25A1Q9BXS0 TAF1-203ENST00000373790 7629 ntAPPRIS ALT2 TSL 1 (best) BASIC6.78□□□□□ -1.32
COL25A1Q9BXS0 WDR44-201ENST00000254029 4111 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
COL25A1Q9BXS0 PCDH15-230ENST00000617051 7048 ntTSL 5 BASIC6.78□□□□□ -1.32
COL25A1Q9BXS0 GPR63-201ENST00000229955 5952 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
COL25A1Q9BXS0 MED23-201ENST00000354577 4581 ntAPPRIS ALT1 TSL 1 (best) BASIC6.77□□□□□ -1.32
COL25A1Q9BXS0 NSA2-205ENST00000610426 4594 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.32
COL25A1Q9BXS0 MAP4K4-212ENST00000456652 3855 ntTSL 5 BASIC6.77□□□□□ -1.32
COL25A1Q9BXS0 NSRP1P1-201ENST00000444067 1693 ntBASIC6.77□□□□□ -1.32
COL25A1Q9BXS0 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC6.77□□□□□ -1.32
COL25A1Q9BXS0 RBM46-201ENST00000281722 2583 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
COL25A1Q9BXS0 ATP2B1-204ENST00000428670 7032 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
COL25A1Q9BXS0 CRBN-203ENST00000432408 2203 ntAPPRIS ALT1 TSL 1 (best) BASIC6.77□□□□□ -1.33
COL25A1Q9BXS0 ZNF781-201ENST00000358582 3147 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
COL25A1Q9BXS0 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC6.77□□□□□ -1.33
COL25A1Q9BXS0 MTFR2-205ENST00000451457 1524 ntAPPRIS P2 TSL 1 (best) BASIC6.77□□□□□ -1.33
COL25A1Q9BXS0 ADCY10P1-203ENST00000567255 4569 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
COL25A1Q9BXS0 CTAGE3P-201ENST00000454280 2404 ntBASIC6.77□□□□□ -1.33
COL25A1Q9BXS0 DLG2-229ENST00000531015 2892 ntTSL 2 BASIC6.77□□□□□ -1.33
COL25A1Q9BXS0 IGF1-206ENST00000456098 7370 ntTSL 5 BASIC6.77□□□□□ -1.33
COL25A1Q9BXS0 FAM122C-211ENST00000623326 2064 ntAPPRIS ALT2 TSL 1 (best) BASIC6.77□□□□□ -1.33
COL25A1Q9BXS0 ZNF286A-202ENST00000395894 5443 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
COL25A1Q9BXS0 CPB2-AS1-202ENST00000606243 2185 ntTSL 2 BASIC6.77□□□□□ -1.33
COL25A1Q9BXS0 AC008627.1-201ENST00000517511 1704 ntBASIC6.77□□□□□ -1.33
COL25A1Q9BXS0 CCR8-201ENST00000326306 1253 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
COL25A1Q9BXS0 S100A7L2-201ENST00000368725 339 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
COL25A1Q9BXS0 Y_RNA.556-201ENST00000384677 113 ntBASIC6.77□□□□□ -1.33
COL25A1Q9BXS0 AL109755.1-201ENST00000401791 649 ntBASIC6.77□□□□□ -1.33
COL25A1Q9BXS0 RPL10P10-201ENST00000403509 664 ntBASIC6.77□□□□□ -1.33
COL25A1Q9BXS0 NPM1P38-201ENST00000403835 865 ntBASIC6.77□□□□□ -1.33
COL25A1Q9BXS0 MIR1203-201ENST00000408812 85 ntBASIC6.77□□□□□ -1.33
COL25A1Q9BXS0 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC6.77□□□□□ -1.33
COL25A1Q9BXS0 AC068138.1-201ENST00000412635 217 ntBASIC6.77□□□□□ -1.33
COL25A1Q9BXS0 AL354868.1-201ENST00000417077 482 ntBASIC6.77□□□□□ -1.33
COL25A1Q9BXS0 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC6.77□□□□□ -1.33
COL25A1Q9BXS0 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC6.77□□□□□ -1.33
COL25A1Q9BXS0 CFL1P1-202ENST00000432948 411 ntBASIC6.77□□□□□ -1.33
COL25A1Q9BXS0 RPS3AP52-201ENST00000435639 297 ntBASIC6.77□□□□□ -1.33
COL25A1Q9BXS0 RPS12P17-201ENST00000438591 377 ntBASIC6.77□□□□□ -1.33
COL25A1Q9BXS0 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC6.77□□□□□ -1.33
COL25A1Q9BXS0 AL606490.1-201ENST00000452266 765 ntBASIC6.77□□□□□ -1.33
COL25A1Q9BXS0 VN1R17P-201ENST00000472048 1090 ntBASIC6.77□□□□□ -1.33
COL25A1Q9BXS0 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC6.77□□□□□ -1.33
COL25A1Q9BXS0 PCBP2P3-201ENST00000509726 843 ntBASIC6.77□□□□□ -1.33
COL25A1Q9BXS0 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC6.77□□□□□ -1.33
COL25A1Q9BXS0 OR52H2P-201ENST00000514607 902 ntBASIC6.77□□□□□ -1.33
COL25A1Q9BXS0 BX510359.5-201ENST00000515651 304 ntBASIC6.77□□□□□ -1.33
COL25A1Q9BXS0 Y_RNA.668-201ENST00000516233 93 ntBASIC6.77□□□□□ -1.33
COL25A1Q9BXS0 RN7SKP66-201ENST00000516681 231 ntBASIC6.77□□□□□ -1.33
COL25A1Q9BXS0 RN7SKP2-201ENST00000517003 319 ntBASIC6.77□□□□□ -1.33
COL25A1Q9BXS0 RN7SKP295-201ENST00000517264 153 ntBASIC6.77□□□□□ -1.33
COL25A1Q9BXS0 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC6.77□□□□□ -1.33
COL25A1Q9BXS0 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC6.77□□□□□ -1.33
COL25A1Q9BXS0 AC091078.2-201ENST00000557145 559 ntBASIC6.77□□□□□ -1.33
COL25A1Q9BXS0 AC079075.1-201ENST00000559543 878 ntBASIC6.77□□□□□ -1.33
COL25A1Q9BXS0 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC6.77□□□□□ -1.33
COL25A1Q9BXS0 AC018558.5-201ENST00000565840 952 ntBASIC6.77□□□□□ -1.33
COL25A1Q9BXS0 ACTG1P15-201ENST00000570019 1063 ntBASIC6.77□□□□□ -1.33
COL25A1Q9BXS0 KCNMA1-AS1-204ENST00000595702 504 ntTSL 5 BASIC6.77□□□□□ -1.33
COL25A1Q9BXS0 AC068768.2-201ENST00000602352 343 ntBASIC6.77□□□□□ -1.33
COL25A1Q9BXS0 BNIP3P4-201ENST00000604946 565 ntBASIC6.77□□□□□ -1.33
COL25A1Q9BXS0 AL035410.2-201ENST00000604963 864 ntBASIC6.77□□□□□ -1.33
COL25A1Q9BXS0 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC6.77□□□□□ -1.33
COL25A1Q9BXS0 AC100827.5-201ENST00000615883 426 ntBASIC6.77□□□□□ -1.33
COL25A1Q9BXS0 Six3os1_1.1-201ENST00000620900 87 ntBASIC6.77□□□□□ -1.33
COL25A1Q9BXS0 SNORA16A-202ENST00000628458 135 ntBASIC6.77□□□□□ -1.33
COL25A1Q9BXS0 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC6.77□□□□□ -1.33
COL25A1Q9BXS0 CYFIP2-201ENST00000435847 3673 ntTSL 2 BASIC6.77□□□□□ -1.33
COL25A1Q9BXS0 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
COL25A1Q9BXS0 AP2B1-211ENST00000610402 3204 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
COL25A1Q9BXS0 AC090132.1-201ENST00000524071 1480 ntBASIC6.77□□□□□ -1.33
COL25A1Q9BXS0 HEPACAM2-201ENST00000341723 2122 ntAPPRIS P3 TSL 1 (best) BASIC6.77□□□□□ -1.33
COL25A1Q9BXS0 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC6.77□□□□□ -1.33
COL25A1Q9BXS0 OGT-202ENST00000373719 5461 ntAPPRIS P3 TSL 1 (best) BASIC6.77□□□□□ -1.33
COL25A1Q9BXS0 NEMP1-201ENST00000300128 5590 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
COL25A1Q9BXS0 AC096992.2-201ENST00000609553 1684 ntBASIC6.77□□□□□ -1.33
COL25A1Q9BXS0 GPR1-AS-201ENST00000623040 3708 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
COL25A1Q9BXS0 FARSB-201ENST00000281828 3369 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
COL25A1Q9BXS0 ZNF793-207ENST00000587986 3869 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
COL25A1Q9BXS0 NUSAP1-202ENST00000414849 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
COL25A1Q9BXS0 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC6.76□□□□□ -1.33
COL25A1Q9BXS0 OFD1P10Y-201ENST00000434110 1433 ntBASIC6.76□□□□□ -1.33
COL25A1Q9BXS0 GIF-201ENST00000257248 1518 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
COL25A1Q9BXS0 PTPN3-203ENST00000412145 8765 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
COL25A1Q9BXS0 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 74.8 ms