Protein–RNA interactions for Protein: Q99567

NUP88, Nuclear pore complex protein Nup88, humanhuman

Predicted RBP Predictions only

Length 741 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88Q99567 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC6.01□□□□□ -1.45
NUP88Q99567 XKRYP2-201ENST00000432915 492 ntBASIC6.01□□□□□ -1.45
NUP88Q99567 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC6.01□□□□□ -1.45
NUP88Q99567 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC6.01□□□□□ -1.45
NUP88Q99567 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC6.01□□□□□ -1.45
NUP88Q99567 AL050341.1-201ENST00000447743 313 ntBASIC6.01□□□□□ -1.45
NUP88Q99567 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC6.01□□□□□ -1.45
NUP88Q99567 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC6.01□□□□□ -1.45
NUP88Q99567 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC6.01□□□□□ -1.45
NUP88Q99567 TRBV8-2-201ENST00000475637 270 ntBASIC6.01□□□□□ -1.45
NUP88Q99567 RN7SL591P-201ENST00000496150 292 ntBASIC6.01□□□□□ -1.45
NUP88Q99567 HPRT1P2-201ENST00000505250 544 ntBASIC6.01□□□□□ -1.45
NUP88Q99567 AC006427.1-201ENST00000514359 712 ntBASIC6.01□□□□□ -1.45
NUP88Q99567 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC6.01□□□□□ -1.45
NUP88Q99567 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC6.01□□□□□ -1.45
NUP88Q99567 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
NUP88Q99567 MIR4480-201ENST00000582492 71 ntBASIC6.01□□□□□ -1.45
NUP88Q99567 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
NUP88Q99567 AC009948.4-201ENST00000604692 675 ntBASIC6.01□□□□□ -1.45
NUP88Q99567 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
NUP88Q99567 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC6.01□□□□□ -1.45
NUP88Q99567 EIF3FP1-201ENST00000613970 806 ntBASIC6.01□□□□□ -1.45
NUP88Q99567 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
NUP88Q99567 AC123767.1-202ENST00000620407 817 ntBASIC6.01□□□□□ -1.45
NUP88Q99567 AC087385.3-201ENST00000620477 187 ntBASIC6.01□□□□□ -1.45
NUP88Q99567 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC6.01□□□□□ -1.45
NUP88Q99567 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC6.01□□□□□ -1.45
NUP88Q99567 INTS6P1-201ENST00000504674 2530 ntBASIC6.01□□□□□ -1.45
NUP88Q99567 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
NUP88Q99567 CASC19-221ENST00000641309 1382 ntBASIC6.01□□□□□ -1.45
NUP88Q99567 IRF5P1-201ENST00000504852 2164 ntBASIC6.01□□□□□ -1.45
NUP88Q99567 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC6.01□□□□□ -1.45
NUP88Q99567 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC6.01□□□□□ -1.45
NUP88Q99567 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
NUP88Q99567 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
NUP88Q99567 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
NUP88Q99567 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC6□□□□□ -1.45
NUP88Q99567 MFSD8-220ENST00000641243 1422 ntBASIC6□□□□□ -1.45
NUP88Q99567 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
NUP88Q99567 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC6□□□□□ -1.45
NUP88Q99567 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC6□□□□□ -1.45
NUP88Q99567 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC6□□□□□ -1.45
NUP88Q99567 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC6□□□□□ -1.45
NUP88Q99567 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC6□□□□□ -1.45
NUP88Q99567 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC6□□□□□ -1.45
NUP88Q99567 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC6□□□□□ -1.45
NUP88Q99567 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
NUP88Q99567 RNU6-543P-201ENST00000362576 108 ntBASIC6□□□□□ -1.45
NUP88Q99567 OR8V1P-201ENST00000395193 873 ntBASIC6□□□□□ -1.45
NUP88Q99567 MIR1303-201ENST00000408625 86 ntBASIC6□□□□□ -1.45
NUP88Q99567 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC6□□□□□ -1.45
NUP88Q99567 AC002542.1-201ENST00000440683 193 ntBASIC6□□□□□ -1.45
NUP88Q99567 AL035551.1-201ENST00000446931 348 ntBASIC6□□□□□ -1.45
NUP88Q99567 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC6□□□□□ -1.45
NUP88Q99567 AC083982.1-201ENST00000485679 344 ntBASIC6□□□□□ -1.45
NUP88Q99567 RPS23P1-201ENST00000491662 432 ntBASIC6□□□□□ -1.45
NUP88Q99567 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC6□□□□□ -1.45
NUP88Q99567 PRELID3BP4-201ENST00000515476 571 ntBASIC6□□□□□ -1.45
NUP88Q99567 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC6□□□□□ -1.45
NUP88Q99567 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC6□□□□□ -1.45
NUP88Q99567 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC6□□□□□ -1.45
NUP88Q99567 MIR3934-201ENST00000579806 107 ntBASIC6□□□□□ -1.45
NUP88Q99567 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC6□□□□□ -1.45
NUP88Q99567 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC6□□□□□ -1.45
NUP88Q99567 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC6□□□□□ -1.45
NUP88Q99567 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC6□□□□□ -1.45
NUP88Q99567 AC113368.1-201ENST00000603736 382 ntBASIC6□□□□□ -1.45
NUP88Q99567 AC024060.1-201ENST00000607052 494 ntBASIC6□□□□□ -1.45
NUP88Q99567 MIR6748-201ENST00000610433 71 ntBASIC6□□□□□ -1.45
NUP88Q99567 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC6□□□□□ -1.45
NUP88Q99567 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC6□□□□□ -1.45
NUP88Q99567 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
NUP88Q99567 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
NUP88Q99567 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC6□□□□□ -1.45
NUP88Q99567 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
NUP88Q99567 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC6□□□□□ -1.45
NUP88Q99567 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC6□□□□□ -1.45
NUP88Q99567 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC6□□□□□ -1.45
NUP88Q99567 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
NUP88Q99567 AP000473.2-201ENST00000602659 1537 ntBASIC5.99□□□□□ -1.45
NUP88Q99567 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
NUP88Q99567 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
NUP88Q99567 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC5.99□□□□□ -1.45
NUP88Q99567 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
NUP88Q99567 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
NUP88Q99567 OR9G4-201ENST00000302957 984 ntBASIC5.99□□□□□ -1.45
NUP88Q99567 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
NUP88Q99567 FHIT-201ENST00000341848 174 ntTSL 3 BASIC5.99□□□□□ -1.45
NUP88Q99567 RNU4-68P-201ENST00000364314 141 ntBASIC5.99□□□□□ -1.45
NUP88Q99567 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
NUP88Q99567 AC092745.2-202ENST00000411880 369 ntBASIC5.99□□□□□ -1.45
NUP88Q99567 AL139128.1-201ENST00000413921 941 ntBASIC5.99□□□□□ -1.45
NUP88Q99567 OR2AM1P-201ENST00000422137 422 ntBASIC5.99□□□□□ -1.45
NUP88Q99567 DNAJA1P1-201ENST00000425106 1187 ntBASIC5.99□□□□□ -1.45
NUP88Q99567 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC5.99□□□□□ -1.45
NUP88Q99567 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC5.99□□□□□ -1.45
NUP88Q99567 CDY14P-201ENST00000431260 1014 ntBASIC5.99□□□□□ -1.45
NUP88Q99567 FTLP19-201ENST00000433300 394 ntBASIC5.99□□□□□ -1.45
NUP88Q99567 AL772161.1-201ENST00000439130 476 ntBASIC5.99□□□□□ -1.45
NUP88Q99567 CDY12P-201ENST00000440679 1015 ntBASIC5.99□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 96.4 ms