Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 DPCR1-202ENST00000462446 5314 ntAPPRIS P2 TSL 5 BASIC7.08□□□□□ -1.28
IFT140Q96RY7 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
IFT140Q96RY7 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC7.08□□□□□ -1.28
IFT140Q96RY7 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
IFT140Q96RY7 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC7.07□□□□□ -1.28
IFT140Q96RY7 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC7.07□□□□□ -1.28
IFT140Q96RY7 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC7.07□□□□□ -1.28
IFT140Q96RY7 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
IFT140Q96RY7 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
IFT140Q96RY7 ANKRD17-203ENST00000509867 8105 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
IFT140Q96RY7 ACEA_U3.1-201ENST00000363057 217 ntBASIC7.07□□□□□ -1.28
IFT140Q96RY7 ABCF2P2-201ENST00000450549 296 ntBASIC7.07□□□□□ -1.28
IFT140Q96RY7 AC026427.2-201ENST00000506228 536 ntBASIC7.07□□□□□ -1.28
IFT140Q96RY7 RN7SKP141-201ENST00000516167 338 ntBASIC7.07□□□□□ -1.28
IFT140Q96RY7 DUX4L52-201ENST00000549363 777 ntBASIC7.07□□□□□ -1.28
IFT140Q96RY7 LYST-202ENST00000389794 12985 ntTSL 5 BASIC7.07□□□□□ -1.28
IFT140Q96RY7 AL359922.3-201ENST00000624779 1670 ntBASIC7.07□□□□□ -1.28
IFT140Q96RY7 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
IFT140Q96RY7 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
IFT140Q96RY7 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
IFT140Q96RY7 MIR218-2-201ENST00000385006 110 ntBASIC7.06□□□□□ -1.28
IFT140Q96RY7 RN7SKP156-201ENST00000410308 342 ntBASIC7.06□□□□□ -1.28
IFT140Q96RY7 SNORA57.3-201ENST00000411095 141 ntBASIC7.06□□□□□ -1.28
IFT140Q96RY7 AC062016.2-201ENST00000420950 676 ntBASIC7.06□□□□□ -1.28
IFT140Q96RY7 HNRNPA1P29-201ENST00000426409 879 ntBASIC7.06□□□□□ -1.28
IFT140Q96RY7 RPL21P91-201ENST00000429231 479 ntBASIC7.06□□□□□ -1.28
IFT140Q96RY7 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC7.06□□□□□ -1.28
IFT140Q96RY7 RPL23AP46-201ENST00000438548 490 ntBASIC7.06□□□□□ -1.28
IFT140Q96RY7 SERPINA7P1-201ENST00000443077 631 ntBASIC7.06□□□□□ -1.28
IFT140Q96RY7 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC7.06□□□□□ -1.28
IFT140Q96RY7 RPS20P21-201ENST00000466859 343 ntBASIC7.06□□□□□ -1.28
IFT140Q96RY7 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC7.06□□□□□ -1.28
IFT140Q96RY7 NAT2-202ENST00000520116 716 ntTSL 3 BASIC7.06□□□□□ -1.28
IFT140Q96RY7 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC7.06□□□□□ -1.28
IFT140Q96RY7 AC005255.1-201ENST00000593748 216 ntBASIC7.06□□□□□ -1.28
IFT140Q96RY7 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC7.06□□□□□ -1.28
IFT140Q96RY7 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
IFT140Q96RY7 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC7.06□□□□□ -1.28
IFT140Q96RY7 EED-206ENST00000527888 1422 ntTSL 2 BASIC7.06□□□□□ -1.28
IFT140Q96RY7 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC7.06□□□□□ -1.28
IFT140Q96RY7 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
IFT140Q96RY7 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
IFT140Q96RY7 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC7.06□□□□□ -1.28
IFT140Q96RY7 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
IFT140Q96RY7 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC7.06□□□□□ -1.28
IFT140Q96RY7 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
IFT140Q96RY7 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC7.06□□□□□ -1.28
IFT140Q96RY7 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
IFT140Q96RY7 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC7.06□□□□□ -1.28
IFT140Q96RY7 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC7.06□□□□□ -1.28
IFT140Q96RY7 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
IFT140Q96RY7 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
IFT140Q96RY7 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC7.05□□□□□ -1.28
IFT140Q96RY7 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC7.05□□□□□ -1.28
IFT140Q96RY7 SYF2P2-201ENST00000417620 583 ntBASIC7.05□□□□□ -1.28
IFT140Q96RY7 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC7.05□□□□□ -1.28
IFT140Q96RY7 RPEP2-201ENST00000432149 701 ntBASIC7.05□□□□□ -1.28
IFT140Q96RY7 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC7.05□□□□□ -1.28
IFT140Q96RY7 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC7.05□□□□□ -1.28
IFT140Q96RY7 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
IFT140Q96RY7 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
IFT140Q96RY7 AF213884.1-201ENST00000488102 463 ntBASIC7.05□□□□□ -1.28
IFT140Q96RY7 AC104164.2-201ENST00000496953 495 ntBASIC7.05□□□□□ -1.28
IFT140Q96RY7 AL139099.1-201ENST00000497398 403 ntBASIC7.05□□□□□ -1.28
IFT140Q96RY7 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC7.05□□□□□ -1.28
IFT140Q96RY7 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC7.05□□□□□ -1.28
IFT140Q96RY7 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC7.05□□□□□ -1.28
IFT140Q96RY7 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC7.05□□□□□ -1.28
IFT140Q96RY7 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
IFT140Q96RY7 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC7.05□□□□□ -1.28
IFT140Q96RY7 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC7.05□□□□□ -1.28
IFT140Q96RY7 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
IFT140Q96RY7 RNA5SP307-201ENST00000362863 116 ntBASIC7.04□□□□□ -1.28
IFT140Q96RY7 Y_RNA.111-201ENST00000363248 100 ntBASIC7.04□□□□□ -1.28
IFT140Q96RY7 RNA5SP151-201ENST00000365632 117 ntBASIC7.04□□□□□ -1.28
IFT140Q96RY7 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
IFT140Q96RY7 AL080315.1-201ENST00000406055 466 ntBASIC7.04□□□□□ -1.28
IFT140Q96RY7 HMGN2P31-201ENST00000432430 273 ntBASIC7.04□□□□□ -1.28
IFT140Q96RY7 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC7.04□□□□□ -1.28
IFT140Q96RY7 PRDX3P3-201ENST00000447765 522 ntBASIC7.04□□□□□ -1.28
IFT140Q96RY7 AC104978.1-201ENST00000449387 391 ntBASIC7.04□□□□□ -1.28
IFT140Q96RY7 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC7.04□□□□□ -1.28
IFT140Q96RY7 AC016550.3-201ENST00000515706 767 ntBASIC7.04□□□□□ -1.28
IFT140Q96RY7 RNU1-95P-201ENST00000516357 160 ntBASIC7.04□□□□□ -1.28
IFT140Q96RY7 RNU1-128P-201ENST00000516704 160 ntBASIC7.04□□□□□ -1.28
IFT140Q96RY7 OSBPL9P2-201ENST00000526582 1228 ntBASIC7.04□□□□□ -1.28
IFT140Q96RY7 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC7.04□□□□□ -1.28
IFT140Q96RY7 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC7.04□□□□□ -1.28
IFT140Q96RY7 AP002360.3-201ENST00000607673 710 ntBASIC7.04□□□□□ -1.28
IFT140Q96RY7 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC7.04□□□□□ -1.28
IFT140Q96RY7 POLR1A-201ENST00000263857 12749 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
IFT140Q96RY7 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
IFT140Q96RY7 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
IFT140Q96RY7 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
IFT140Q96RY7 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
IFT140Q96RY7 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC7.04□□□□□ -1.28
IFT140Q96RY7 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
IFT140Q96RY7 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
IFT140Q96RY7 RNA5SP72-201ENST00000364442 117 ntBASIC7.04□□□□□ -1.28
IFT140Q96RY7 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC7.04□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 104.6 ms