Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 POT1-202ENST00000393329 3950 ntTSL 5 BASIC6.78□□□□□ -1.32
SYNGAP1Q96PV0 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
SYNGAP1Q96PV0 CCDC125-202ENST00000396496 4198 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
SYNGAP1Q96PV0 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC6.78□□□□□ -1.32
SYNGAP1Q96PV0 RNA5SP46-201ENST00000362370 120 ntBASIC6.77□□□□□ -1.32
SYNGAP1Q96PV0 SNORA72.1-201ENST00000363485 129 ntBASIC6.77□□□□□ -1.32
SYNGAP1Q96PV0 RNU4-12P-201ENST00000365233 139 ntBASIC6.77□□□□□ -1.32
SYNGAP1Q96PV0 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC6.77□□□□□ -1.32
SYNGAP1Q96PV0 MIR525-201ENST00000384978 85 ntBASIC6.77□□□□□ -1.32
SYNGAP1Q96PV0 ZSCAN12P1-201ENST00000406489 419 ntBASIC6.77□□□□□ -1.32
SYNGAP1Q96PV0 AL139098.1-201ENST00000407291 389 ntBASIC6.77□□□□□ -1.32
SYNGAP1Q96PV0 BMS1P17-202ENST00000416720 316 ntBASIC6.77□□□□□ -1.32
SYNGAP1Q96PV0 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC6.77□□□□□ -1.32
SYNGAP1Q96PV0 AC127526.2-201ENST00000426436 775 ntBASIC6.77□□□□□ -1.32
SYNGAP1Q96PV0 AL445928.1-201ENST00000435545 222 ntBASIC6.77□□□□□ -1.32
SYNGAP1Q96PV0 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC6.77□□□□□ -1.32
SYNGAP1Q96PV0 AL662791.1-201ENST00000441992 928 ntBASIC6.77□□□□□ -1.32
SYNGAP1Q96PV0 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC6.77□□□□□ -1.32
SYNGAP1Q96PV0 HMGB1P16-201ENST00000447155 540 ntBASIC6.77□□□□□ -1.32
SYNGAP1Q96PV0 AL592447.1-201ENST00000447592 540 ntBASIC6.77□□□□□ -1.32
SYNGAP1Q96PV0 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC6.77□□□□□ -1.32
SYNGAP1Q96PV0 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC6.77□□□□□ -1.32
SYNGAP1Q96PV0 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC6.77□□□□□ -1.32
SYNGAP1Q96PV0 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC6.77□□□□□ -1.32
SYNGAP1Q96PV0 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC6.77□□□□□ -1.32
SYNGAP1Q96PV0 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC6.77□□□□□ -1.32
SYNGAP1Q96PV0 RN7SL466P-201ENST00000497546 295 ntBASIC6.77□□□□□ -1.32
SYNGAP1Q96PV0 OR5H5P-201ENST00000503164 928 ntBASIC6.77□□□□□ -1.32
SYNGAP1Q96PV0 AC006499.5-201ENST00000505037 514 ntBASIC6.77□□□□□ -1.32
SYNGAP1Q96PV0 AC018709.1-201ENST00000509111 700 ntAPPRIS P1 TSL 3 BASIC6.77□□□□□ -1.32
SYNGAP1Q96PV0 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC6.77□□□□□ -1.32
SYNGAP1Q96PV0 AC104108.1-201ENST00000509930 412 ntBASIC6.77□□□□□ -1.32
SYNGAP1Q96PV0 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC6.77□□□□□ -1.32
SYNGAP1Q96PV0 RN7SKP298-201ENST00000515950 94 ntBASIC6.77□□□□□ -1.32
SYNGAP1Q96PV0 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC6.77□□□□□ -1.32
SYNGAP1Q96PV0 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC6.77□□□□□ -1.32
SYNGAP1Q96PV0 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC6.77□□□□□ -1.32
SYNGAP1Q96PV0 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC6.77□□□□□ -1.32
SYNGAP1Q96PV0 OR4H6P-201ENST00000563771 921 ntBASIC6.77□□□□□ -1.32
SYNGAP1Q96PV0 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC6.77□□□□□ -1.32
SYNGAP1Q96PV0 AC068020.1-201ENST00000594215 661 ntBASIC6.77□□□□□ -1.32
SYNGAP1Q96PV0 AC078795.3-201ENST00000602913 472 ntBASIC6.77□□□□□ -1.32
SYNGAP1Q96PV0 AC130352.1-201ENST00000602979 661 ntBASIC6.77□□□□□ -1.32
SYNGAP1Q96PV0 AC112220.3-201ENST00000605502 502 ntBASIC6.77□□□□□ -1.32
SYNGAP1Q96PV0 ZNRD1ASP-221ENST00000637794 1074 ntBASIC6.77□□□□□ -1.32
SYNGAP1Q96PV0 AC099063.3-201ENST00000642066 185 ntBASIC6.77□□□□□ -1.32
SYNGAP1Q96PV0 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
SYNGAP1Q96PV0 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC6.77□□□□□ -1.33
SYNGAP1Q96PV0 TMED10-201ENST00000303575 4127 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
SYNGAP1Q96PV0 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
SYNGAP1Q96PV0 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
SYNGAP1Q96PV0 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC6.77□□□□□ -1.33
SYNGAP1Q96PV0 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC6.77□□□□□ -1.33
SYNGAP1Q96PV0 AC073365.1-203ENST00000641055 1992 ntBASIC6.77□□□□□ -1.33
SYNGAP1Q96PV0 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC6.77□□□□□ -1.33
SYNGAP1Q96PV0 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC6.77□□□□□ -1.33
SYNGAP1Q96PV0 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
SYNGAP1Q96PV0 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
SYNGAP1Q96PV0 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC6.77□□□□□ -1.33
SYNGAP1Q96PV0 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC6.77□□□□□ -1.33
SYNGAP1Q96PV0 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC6.77□□□□□ -1.33
SYNGAP1Q96PV0 BDNF-217ENST00000533131 3878 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
SYNGAP1Q96PV0 DTNA-207ENST00000444659 6343 ntAPPRIS ALT2 TSL 5 BASIC6.77□□□□□ -1.33
SYNGAP1Q96PV0 METTL21EP-201ENST00000298105 713 ntBASIC6.76□□□□□ -1.33
SYNGAP1Q96PV0 OR10R3P-201ENST00000361688 942 ntBASIC6.76□□□□□ -1.33
SYNGAP1Q96PV0 SNORA64.1-201ENST00000362600 132 ntBASIC6.76□□□□□ -1.33
SYNGAP1Q96PV0 Y_RNA.813-201ENST00000364639 102 ntBASIC6.76□□□□□ -1.33
SYNGAP1Q96PV0 SNORA70.9-201ENST00000384370 135 ntBASIC6.76□□□□□ -1.33
SYNGAP1Q96PV0 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
SYNGAP1Q96PV0 MTCO3P31-201ENST00000405526 789 ntBASIC6.76□□□□□ -1.33
SYNGAP1Q96PV0 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC6.76□□□□□ -1.33
SYNGAP1Q96PV0 USP9YP18-201ENST00000425912 695 ntBASIC6.76□□□□□ -1.33
SYNGAP1Q96PV0 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC6.76□□□□□ -1.33
SYNGAP1Q96PV0 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC6.76□□□□□ -1.33
SYNGAP1Q96PV0 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC6.76□□□□□ -1.33
SYNGAP1Q96PV0 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC6.76□□□□□ -1.33
SYNGAP1Q96PV0 MTCO2P25-201ENST00000447065 681 ntBASIC6.76□□□□□ -1.33
SYNGAP1Q96PV0 AL356981.1-201ENST00000454879 684 ntBASIC6.76□□□□□ -1.33
SYNGAP1Q96PV0 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC6.76□□□□□ -1.33
SYNGAP1Q96PV0 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC6.76□□□□□ -1.33
SYNGAP1Q96PV0 AC008629.2-201ENST00000503783 483 ntBASIC6.76□□□□□ -1.33
SYNGAP1Q96PV0 IGBP1P5-201ENST00000507524 1000 ntBASIC6.76□□□□□ -1.33
SYNGAP1Q96PV0 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC6.76□□□□□ -1.33
SYNGAP1Q96PV0 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC6.76□□□□□ -1.33
SYNGAP1Q96PV0 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
SYNGAP1Q96PV0 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
SYNGAP1Q96PV0 OR6C7P-201ENST00000547875 934 ntBASIC6.76□□□□□ -1.33
SYNGAP1Q96PV0 AL049870.4-201ENST00000555741 486 ntBASIC6.76□□□□□ -1.33
SYNGAP1Q96PV0 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC6.76□□□□□ -1.33
SYNGAP1Q96PV0 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC6.76□□□□□ -1.33
SYNGAP1Q96PV0 MIR4697-201ENST00000582977 78 ntBASIC6.76□□□□□ -1.33
SYNGAP1Q96PV0 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
SYNGAP1Q96PV0 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC6.76□□□□□ -1.33
SYNGAP1Q96PV0 NAA60-237ENST00000615865 326 ntTSL 5 BASIC6.76□□□□□ -1.33
SYNGAP1Q96PV0 AL691477.1-201ENST00000624398 162 ntBASIC6.76□□□□□ -1.33
SYNGAP1Q96PV0 AC015726.3-201ENST00000624501 418 ntBASIC6.76□□□□□ -1.33
SYNGAP1Q96PV0 SAMMSON-227ENST00000642114 1199 ntBASIC6.76□□□□□ -1.33
SYNGAP1Q96PV0 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
SYNGAP1Q96PV0 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
SYNGAP1Q96PV0 AC068389.1-202ENST00000526470 3564 ntTSL 2 BASIC6.76□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 115 ms