Protein–RNA interactions for Protein: Q96NR3

PTCHD1, Patched domain-containing protein 1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1Q96NR3 AP001541.1-201ENST00000623322 1904 ntBASIC5.84□□□□□ -1.48
PTCHD1Q96NR3 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC5.83□□□□□ -1.48
PTCHD1Q96NR3 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
PTCHD1Q96NR3 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
PTCHD1Q96NR3 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC5.83□□□□□ -1.48
PTCHD1Q96NR3 RMDN2-202ENST00000354545 1381 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
PTCHD1Q96NR3 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
PTCHD1Q96NR3 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC5.83□□□□□ -1.48
PTCHD1Q96NR3 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC5.83□□□□□ -1.48
PTCHD1Q96NR3 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC5.83□□□□□ -1.48
PTCHD1Q96NR3 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC5.83□□□□□ -1.48
PTCHD1Q96NR3 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC5.83□□□□□ -1.48
PTCHD1Q96NR3 RNU6-492P-201ENST00000363035 104 ntBASIC5.83□□□□□ -1.48
PTCHD1Q96NR3 SNORA43.1-201ENST00000364863 140 ntBASIC5.83□□□□□ -1.48
PTCHD1Q96NR3 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC5.83□□□□□ -1.48
PTCHD1Q96NR3 RNU6-761P-201ENST00000384148 107 ntBASIC5.83□□□□□ -1.48
PTCHD1Q96NR3 RNU6-297P-201ENST00000384636 107 ntBASIC5.83□□□□□ -1.48
PTCHD1Q96NR3 AP003170.5-201ENST00000397185 335 ntBASIC5.83□□□□□ -1.48
PTCHD1Q96NR3 RPS3AP23-201ENST00000401762 784 ntBASIC5.83□□□□□ -1.48
PTCHD1Q96NR3 AL589647.1-201ENST00000402485 466 ntBASIC5.83□□□□□ -1.48
PTCHD1Q96NR3 OR2W4P-201ENST00000406496 926 ntBASIC5.83□□□□□ -1.48
PTCHD1Q96NR3 LSM5-205ENST00000409952 687 ntTSL 4 BASIC5.83□□□□□ -1.48
PTCHD1Q96NR3 RN7SKP222-201ENST00000410651 315 ntBASIC5.83□□□□□ -1.48
PTCHD1Q96NR3 LINC00396-201ENST00000411690 439 ntTSL 3 BASIC5.83□□□□□ -1.48
PTCHD1Q96NR3 HMGB3P23-201ENST00000414981 585 ntBASIC5.83□□□□□ -1.48
PTCHD1Q96NR3 LINC00993-201ENST00000420453 540 ntBASIC5.83□□□□□ -1.48
PTCHD1Q96NR3 OFD1P18Y-201ENST00000420889 959 ntBASIC5.83□□□□□ -1.48
PTCHD1Q96NR3 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC5.83□□□□□ -1.48
PTCHD1Q96NR3 RPL7P4-203ENST00000430239 730 ntBASIC5.83□□□□□ -1.48
PTCHD1Q96NR3 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC5.83□□□□□ -1.48
PTCHD1Q96NR3 AC073257.1-201ENST00000432474 523 ntTSL 4 BASIC5.83□□□□□ -1.48
PTCHD1Q96NR3 HMGB1P31-201ENST00000437242 427 ntBASIC5.83□□□□□ -1.48
PTCHD1Q96NR3 OR3D1P-201ENST00000438288 955 ntBASIC5.83□□□□□ -1.48
PTCHD1Q96NR3 AL662791.1-201ENST00000441992 928 ntBASIC5.83□□□□□ -1.48
PTCHD1Q96NR3 RPL7P59-201ENST00000447700 943 ntBASIC5.83□□□□□ -1.48
PTCHD1Q96NR3 AC108463.1-201ENST00000450258 347 ntBASIC5.83□□□□□ -1.48
PTCHD1Q96NR3 OR52E7P-201ENST00000452394 933 ntBASIC5.83□□□□□ -1.48
PTCHD1Q96NR3 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC5.83□□□□□ -1.48
PTCHD1Q96NR3 AC041039.1-201ENST00000485656 536 ntBASIC5.83□□□□□ -1.48
PTCHD1Q96NR3 RPL37P23-201ENST00000492641 294 ntBASIC5.83□□□□□ -1.48
PTCHD1Q96NR3 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC5.83□□□□□ -1.48
PTCHD1Q96NR3 HMGB1P28-201ENST00000507778 552 ntBASIC5.83□□□□□ -1.48
PTCHD1Q96NR3 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC5.83□□□□□ -1.48
PTCHD1Q96NR3 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC5.83□□□□□ -1.48
PTCHD1Q96NR3 AC090958.1-201ENST00000511122 351 ntBASIC5.83□□□□□ -1.48
PTCHD1Q96NR3 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC5.83□□□□□ -1.48
PTCHD1Q96NR3 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC5.83□□□□□ -1.48
PTCHD1Q96NR3 AP001646.1-201ENST00000527936 915 ntBASIC5.83□□□□□ -1.48
PTCHD1Q96NR3 OR4A45P-201ENST00000529954 901 ntBASIC5.83□□□□□ -1.48
PTCHD1Q96NR3 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC5.83□□□□□ -1.48
PTCHD1Q96NR3 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC5.83□□□□□ -1.48
PTCHD1Q96NR3 TRAV15-201ENST00000556680 249 ntBASIC5.83□□□□□ -1.48
PTCHD1Q96NR3 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
PTCHD1Q96NR3 EIF5A2P1-201ENST00000564027 460 ntBASIC5.83□□□□□ -1.48
PTCHD1Q96NR3 AC002310.3-201ENST00000569728 723 ntBASIC5.83□□□□□ -1.48
PTCHD1Q96NR3 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC5.83□□□□□ -1.48
PTCHD1Q96NR3 RNU6-88P-201ENST00000606801 100 ntBASIC5.83□□□□□ -1.48
PTCHD1Q96NR3 AL591167.1-201ENST00000607321 456 ntBASIC5.83□□□□□ -1.48
PTCHD1Q96NR3 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC5.83□□□□□ -1.48
PTCHD1Q96NR3 AC063943.3-201ENST00000615562 356 ntBASIC5.83□□□□□ -1.48
PTCHD1Q96NR3 AC027807.2-201ENST00000616099 408 ntBASIC5.83□□□□□ -1.48
PTCHD1Q96NR3 RFPL4AP6-201ENST00000616792 846 ntBASIC5.83□□□□□ -1.48
PTCHD1Q96NR3 AC234782.5-201ENST00000617723 324 ntBASIC5.83□□□□□ -1.48
PTCHD1Q96NR3 REV3L-214ENST00000619481 969 ntTSL 5 BASIC5.83□□□□□ -1.48
PTCHD1Q96NR3 AC138649.3-201ENST00000622154 254 ntBASIC5.83□□□□□ -1.48
PTCHD1Q96NR3 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC5.83□□□□□ -1.48
PTCHD1Q96NR3 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC5.83□□□□□ -1.48
PTCHD1Q96NR3 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
PTCHD1Q96NR3 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
PTCHD1Q96NR3 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
PTCHD1Q96NR3 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
PTCHD1Q96NR3 TMPRSS15-201ENST00000284885 3947 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
PTCHD1Q96NR3 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC5.83□□□□□ -1.48
PTCHD1Q96NR3 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
PTCHD1Q96NR3 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
PTCHD1Q96NR3 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
PTCHD1Q96NR3 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
PTCHD1Q96NR3 MTND4P16-201ENST00000466108 1367 ntBASIC5.82□□□□□ -1.48
PTCHD1Q96NR3 LZTFL1-201ENST00000296135 4073 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
PTCHD1Q96NR3 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
PTCHD1Q96NR3 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
PTCHD1Q96NR3 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
PTCHD1Q96NR3 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
PTCHD1Q96NR3 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC5.82□□□□□ -1.48
PTCHD1Q96NR3 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
PTCHD1Q96NR3 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
PTCHD1Q96NR3 Y_RNA.70-201ENST00000362886 110 ntBASIC5.82□□□□□ -1.48
PTCHD1Q96NR3 AL451142.1-201ENST00000375867 775 ntBASIC5.82□□□□□ -1.48
PTCHD1Q96NR3 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
PTCHD1Q96NR3 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
PTCHD1Q96NR3 RNU6-723P-201ENST00000383973 107 ntBASIC5.82□□□□□ -1.48
PTCHD1Q96NR3 SNORA40.3-201ENST00000390964 122 ntBASIC5.82□□□□□ -1.48
PTCHD1Q96NR3 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
PTCHD1Q96NR3 MIR1277-201ENST00000408536 78 ntBASIC5.82□□□□□ -1.48
PTCHD1Q96NR3 RNA5SP431-201ENST00000410312 120 ntBASIC5.82□□□□□ -1.48
PTCHD1Q96NR3 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC5.82□□□□□ -1.48
PTCHD1Q96NR3 AIMP1P1-201ENST00000418670 937 ntBASIC5.82□□□□□ -1.48
PTCHD1Q96NR3 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC5.82□□□□□ -1.48
PTCHD1Q96NR3 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC5.82□□□□□ -1.48
PTCHD1Q96NR3 RPSAP65-201ENST00000429660 595 ntBASIC5.82□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 112.3 ms