Protein–RNA interactions for Protein: Q8WXD2

SCG3, Secretogranin-3, humanhuman

Known RBP Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3Q8WXD2 ABI1-207ENST00000376142 3576 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
SCG3Q8WXD2 MCFD2-206ENST00000409800 3955 ntTSL 4 BASIC6.89□□□□□ -1.31
SCG3Q8WXD2 TXNRD1-203ENST00000397736 3832 ntTSL 5 BASIC6.88□□□□□ -1.31
SCG3Q8WXD2 L3MBTL3-209ENST00000533560 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC6.88□□□□□ -1.31
SCG3Q8WXD2 AC074141.1-201ENST00000588129 2995 ntBASIC6.88□□□□□ -1.31
SCG3Q8WXD2 RASGRF1-201ENST00000394745 2850 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
SCG3Q8WXD2 FMO4-201ENST00000367749 2252 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
SCG3Q8WXD2 AL136317.2-201ENST00000619851 2254 ntTSL 2 BASIC6.88□□□□□ -1.31
SCG3Q8WXD2 STMN2-201ENST00000220876 2223 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
SCG3Q8WXD2 CASC19-284ENST00000642142 1868 ntBASIC6.88□□□□□ -1.31
SCG3Q8WXD2 AMY1B-202ENST00000370080 1787 ntAPPRIS P1 TSL 2 BASIC6.88□□□□□ -1.31
SCG3Q8WXD2 AMY1A-201ENST00000370083 1790 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
SCG3Q8WXD2 AL035665.1-201ENST00000428495 1669 ntTSL 3 BASIC6.88□□□□□ -1.31
SCG3Q8WXD2 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC6.88□□□□□ -1.31
SCG3Q8WXD2 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC6.88□□□□□ -1.31
SCG3Q8WXD2 ZNF254-207ENST00000613065 4244 ntTSL 3 BASIC6.88□□□□□ -1.31
SCG3Q8WXD2 GNG5P1-201ENST00000255500 204 ntBASIC6.88□□□□□ -1.31
SCG3Q8WXD2 CEP112-201ENST00000317442 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC6.88□□□□□ -1.31
SCG3Q8WXD2 RPL24P4-201ENST00000326586 421 ntBASIC6.88□□□□□ -1.31
SCG3Q8WXD2 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
SCG3Q8WXD2 Y_RNA.86-201ENST00000363020 111 ntBASIC6.88□□□□□ -1.31
SCG3Q8WXD2 ATP5EP2-201ENST00000381026 385 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
SCG3Q8WXD2 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC6.88□□□□□ -1.31
SCG3Q8WXD2 ARSFP1-201ENST00000398758 477 ntBASIC6.88□□□□□ -1.31
SCG3Q8WXD2 AL033519.1-201ENST00000407266 307 ntBASIC6.88□□□□□ -1.31
SCG3Q8WXD2 RNA5SP118-201ENST00000410385 109 ntBASIC6.88□□□□□ -1.31
SCG3Q8WXD2 RNU2-6P-201ENST00000411404 190 ntBASIC6.88□□□□□ -1.31
SCG3Q8WXD2 RANP6-201ENST00000413691 644 ntBASIC6.88□□□□□ -1.31
SCG3Q8WXD2 AC002511.2-201ENST00000413796 450 ntTSL 2 BASIC6.88□□□□□ -1.31
SCG3Q8WXD2 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC6.88□□□□□ -1.31
SCG3Q8WXD2 Z82198.3-201ENST00000421145 199 ntBASIC6.88□□□□□ -1.31
SCG3Q8WXD2 RPS27AP6-201ENST00000427962 448 ntBASIC6.88□□□□□ -1.31
SCG3Q8WXD2 NDUFA5P4-201ENST00000436704 385 ntBASIC6.88□□□□□ -1.31
SCG3Q8WXD2 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC6.88□□□□□ -1.31
SCG3Q8WXD2 KF459542.1-201ENST00000450908 553 ntBASIC6.88□□□□□ -1.31
SCG3Q8WXD2 BTF3P5-201ENST00000457252 467 ntBASIC6.88□□□□□ -1.31
SCG3Q8WXD2 RPL39P36-201ENST00000490784 156 ntBASIC6.88□□□□□ -1.31
SCG3Q8WXD2 ZNF138-207ENST00000494380 842 ntTSL 2 BASIC6.88□□□□□ -1.31
SCG3Q8WXD2 RPL19P11-201ENST00000495944 589 ntBASIC6.88□□□□□ -1.31
SCG3Q8WXD2 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
SCG3Q8WXD2 AC008629.2-201ENST00000503783 483 ntBASIC6.88□□□□□ -1.31
SCG3Q8WXD2 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC6.88□□□□□ -1.31
SCG3Q8WXD2 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC6.88□□□□□ -1.31
SCG3Q8WXD2 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC6.88□□□□□ -1.31
SCG3Q8WXD2 CASC11-203ENST00000519071 791 ntTSL 3 BASIC6.88□□□□□ -1.31
SCG3Q8WXD2 TPT1-AS1-206ENST00000519454 709 ntTSL 5 BASIC6.88□□□□□ -1.31
SCG3Q8WXD2 AC090791.1-201ENST00000530960 492 ntTSL 3 BASIC6.88□□□□□ -1.31
SCG3Q8WXD2 AP006587.5-201ENST00000532033 739 ntBASIC6.88□□□□□ -1.31
SCG3Q8WXD2 RPL27A-211ENST00000532359 406 ntTSL 2 BASIC6.88□□□□□ -1.31
SCG3Q8WXD2 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC6.88□□□□□ -1.31
SCG3Q8WXD2 FLVCR2-204ENST00000553587 584 ntTSL 2 BASIC6.88□□□□□ -1.31
SCG3Q8WXD2 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC6.88□□□□□ -1.31
SCG3Q8WXD2 AC021483.1-201ENST00000560760 539 ntTSL 3 BASIC6.88□□□□□ -1.31
SCG3Q8WXD2 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC6.88□□□□□ -1.31
SCG3Q8WXD2 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC6.88□□□□□ -1.31
SCG3Q8WXD2 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC6.88□□□□□ -1.31
SCG3Q8WXD2 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC6.88□□□□□ -1.31
SCG3Q8WXD2 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC6.88□□□□□ -1.31
SCG3Q8WXD2 LINC02028-206ENST00000593326 810 ntTSL 5 BASIC6.88□□□□□ -1.31
SCG3Q8WXD2 AC055876.5-201ENST00000605667 259 ntBASIC6.88□□□□□ -1.31
SCG3Q8WXD2 NQO2-209ENST00000606474 470 ntTSL 3 BASIC6.88□□□□□ -1.31
SCG3Q8WXD2 WDR11-AS1-204ENST00000608667 522 ntTSL 5 BASIC6.88□□□□□ -1.31
SCG3Q8WXD2 AL451049.1-201ENST00000608672 497 ntBASIC6.88□□□□□ -1.31
SCG3Q8WXD2 Y_RNA.812-201ENST00000610788 101 ntBASIC6.88□□□□□ -1.31
SCG3Q8WXD2 Y_RNA.784-201ENST00000613803 101 ntBASIC6.88□□□□□ -1.31
SCG3Q8WXD2 Y_RNA.787-201ENST00000616522 101 ntBASIC6.88□□□□□ -1.31
SCG3Q8WXD2 Y_RNA.780-201ENST00000617336 101 ntBASIC6.88□□□□□ -1.31
SCG3Q8WXD2 Y_RNA.801-201ENST00000619005 101 ntBASIC6.88□□□□□ -1.31
SCG3Q8WXD2 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC6.88□□□□□ -1.31
SCG3Q8WXD2 AC009268.2-201ENST00000621925 457 ntBASIC6.88□□□□□ -1.31
SCG3Q8WXD2 MIR193BHG-214ENST00000641765 509 ntBASIC6.88□□□□□ -1.31
SCG3Q8WXD2 SAMMSON-227ENST00000642114 1199 ntBASIC6.88□□□□□ -1.31
SCG3Q8WXD2 AL136531.3-201ENST00000624378 3658 ntBASIC6.88□□□□□ -1.31
SCG3Q8WXD2 KCNQ3-205ENST00000621976 10659 ntAPPRIS ALT2 TSL 5 BASIC6.88□□□□□ -1.31
SCG3Q8WXD2 NXF2B-205ENST00000618881 3193 ntTSL 2 BASIC6.88□□□□□ -1.31
SCG3Q8WXD2 DNAL1-202ENST00000553645 8404 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
SCG3Q8WXD2 SRBD1-201ENST00000263736 3681 ntAPPRIS P1 TSL 2 BASIC6.88□□□□□ -1.31
SCG3Q8WXD2 ZNF229-203ENST00000613197 4835 ntAPPRIS ALT2 TSL 1 (best) BASIC6.88□□□□□ -1.31
SCG3Q8WXD2 TSPAN14-207ENST00000429989 16183 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
SCG3Q8WXD2 CTBS-202ENST00000370630 6600 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
SCG3Q8WXD2 FYB1-209ENST00000512982 2747 ntAPPRIS ALT2 TSL 2 BASIC6.87□□□□□ -1.31
SCG3Q8WXD2 KYNU-203ENST00000409512 1576 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
SCG3Q8WXD2 DPCR1-202ENST00000462446 5314 ntAPPRIS P2 TSL 5 BASIC6.87□□□□□ -1.31
SCG3Q8WXD2 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC6.87□□□□□ -1.31
SCG3Q8WXD2 TRIM49D1-203ENST00000605881 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC6.87□□□□□ -1.31
SCG3Q8WXD2 ARHGAP29-201ENST00000260526 6087 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
SCG3Q8WXD2 CASC19-221ENST00000641309 1382 ntBASIC6.87□□□□□ -1.31
SCG3Q8WXD2 TPMT-201ENST00000309983 3181 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
SCG3Q8WXD2 ALG10-201ENST00000266483 3128 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
SCG3Q8WXD2 ZNF532-201ENST00000336078 6696 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
SCG3Q8WXD2 ZEB2-AS1-202ENST00000427278 1322 ntTSL 5 BASIC6.87□□□□□ -1.31
SCG3Q8WXD2 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
SCG3Q8WXD2 RAET1L-201ENST00000286380 802 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
SCG3Q8WXD2 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
SCG3Q8WXD2 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC6.87□□□□□ -1.31
SCG3Q8WXD2 RNA5SP65-201ENST00000363166 119 ntBASIC6.87□□□□□ -1.31
SCG3Q8WXD2 RNA5SP333-201ENST00000363466 118 ntBASIC6.87□□□□□ -1.31
SCG3Q8WXD2 RNU6-777P-201ENST00000364265 104 ntBASIC6.87□□□□□ -1.31
SCG3Q8WXD2 RNA5SP334-201ENST00000364825 118 ntBASIC6.87□□□□□ -1.31
SCG3Q8WXD2 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms