Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 RN7SKP267-201ENST00000410381 285 ntBASIC4.37□□□□□ -1.71
CLHC1Q8NHS4 RNA5SP146-201ENST00000410743 123 ntBASIC4.37□□□□□ -1.71
CLHC1Q8NHS4 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.37□□□□□ -1.71
CLHC1Q8NHS4 AC022535.1-201ENST00000420082 691 ntTSL 3 BASIC4.37□□□□□ -1.71
CLHC1Q8NHS4 AC073464.3-201ENST00000422564 712 ntBASIC4.37□□□□□ -1.71
CLHC1Q8NHS4 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC4.37□□□□□ -1.71
CLHC1Q8NHS4 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC4.37□□□□□ -1.71
CLHC1Q8NHS4 RPL7P31-201ENST00000450192 724 ntBASIC4.37□□□□□ -1.71
CLHC1Q8NHS4 ISCUP1-201ENST00000454451 448 ntBASIC4.37□□□□□ -1.71
CLHC1Q8NHS4 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC4.37□□□□□ -1.71
CLHC1Q8NHS4 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC4.37□□□□□ -1.71
CLHC1Q8NHS4 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC4.37□□□□□ -1.71
CLHC1Q8NHS4 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC4.37□□□□□ -1.71
CLHC1Q8NHS4 AL110118.1-201ENST00000553543 400 ntBASIC4.37□□□□□ -1.71
CLHC1Q8NHS4 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC4.37□□□□□ -1.71
CLHC1Q8NHS4 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC4.37□□□□□ -1.71
CLHC1Q8NHS4 BGLT3-201ENST00000564523 994 ntBASIC4.37□□□□□ -1.71
CLHC1Q8NHS4 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC4.37□□□□□ -1.71
CLHC1Q8NHS4 AC007448.1-201ENST00000582714 234 ntBASIC4.37□□□□□ -1.71
CLHC1Q8NHS4 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC4.37□□□□□ -1.71
CLHC1Q8NHS4 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
CLHC1Q8NHS4 PSMA6P4-201ENST00000603247 718 ntBASIC4.37□□□□□ -1.71
CLHC1Q8NHS4 AC009318.3-201ENST00000616916 503 ntBASIC4.37□□□□□ -1.71
CLHC1Q8NHS4 MIR6853-201ENST00000619642 74 ntBASIC4.37□□□□□ -1.71
CLHC1Q8NHS4 ASAH1-224ENST00000636269 685 ntTSL 3 BASIC4.37□□□□□ -1.71
CLHC1Q8NHS4 AC134882.1-201ENST00000603738 1676 ntBASIC4.37□□□□□ -1.71
CLHC1Q8NHS4 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
CLHC1Q8NHS4 OR11H5P-202ENST00000641612 1325 ntBASIC4.37□□□□□ -1.71
CLHC1Q8NHS4 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.37□□□□□ -1.71
CLHC1Q8NHS4 USP9YP4-201ENST00000424401 1745 ntBASIC4.37□□□□□ -1.71
CLHC1Q8NHS4 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC4.37□□□□□ -1.71
CLHC1Q8NHS4 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
CLHC1Q8NHS4 AC010928.1-201ENST00000592477 1447 ntBASIC4.37□□□□□ -1.71
CLHC1Q8NHS4 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CLHC1Q8NHS4 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
CLHC1Q8NHS4 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CLHC1Q8NHS4 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
CLHC1Q8NHS4 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CLHC1Q8NHS4 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
CLHC1Q8NHS4 SPTLC1P2-201ENST00000407089 121 ntBASIC4.36□□□□□ -1.71
CLHC1Q8NHS4 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC4.36□□□□□ -1.71
CLHC1Q8NHS4 AC073069.1-201ENST00000428657 441 ntBASIC4.36□□□□□ -1.71
CLHC1Q8NHS4 AC005154.2-201ENST00000438110 379 ntBASIC4.36□□□□□ -1.71
CLHC1Q8NHS4 CACYBPP1-201ENST00000438592 684 ntBASIC4.36□□□□□ -1.71
CLHC1Q8NHS4 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC4.36□□□□□ -1.71
CLHC1Q8NHS4 ARL4AP3-201ENST00000441452 574 ntBASIC4.36□□□□□ -1.71
CLHC1Q8NHS4 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC4.36□□□□□ -1.71
CLHC1Q8NHS4 HMGB3P21-201ENST00000452483 547 ntBASIC4.36□□□□□ -1.71
CLHC1Q8NHS4 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC4.36□□□□□ -1.71
CLHC1Q8NHS4 RNU6-1218P-201ENST00000458990 108 ntBASIC4.36□□□□□ -1.71
CLHC1Q8NHS4 RN7SL817P-201ENST00000480777 288 ntBASIC4.36□□□□□ -1.71
CLHC1Q8NHS4 AC004453.1-201ENST00000487895 408 ntBASIC4.36□□□□□ -1.71
CLHC1Q8NHS4 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CLHC1Q8NHS4 RNU6-347P-201ENST00000516658 105 ntBASIC4.36□□□□□ -1.71
CLHC1Q8NHS4 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC4.36□□□□□ -1.71
CLHC1Q8NHS4 AL512782.1-201ENST00000603093 364 ntBASIC4.36□□□□□ -1.71
CLHC1Q8NHS4 AC073091.2-201ENST00000603205 907 ntBASIC4.36□□□□□ -1.71
CLHC1Q8NHS4 SNORA35B-201ENST00000607417 129 ntBASIC4.36□□□□□ -1.71
CLHC1Q8NHS4 SNX18P1Y-201ENST00000616231 511 ntBASIC4.36□□□□□ -1.71
CLHC1Q8NHS4 AC015722.2-201ENST00000622210 551 ntBASIC4.36□□□□□ -1.71
CLHC1Q8NHS4 U3.53-201ENST00000628922 216 ntBASIC4.36□□□□□ -1.71
CLHC1Q8NHS4 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC4.36□□□□□ -1.71
CLHC1Q8NHS4 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CLHC1Q8NHS4 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CLHC1Q8NHS4 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC4.36□□□□□ -1.71
CLHC1Q8NHS4 AC108467.2-201ENST00000617640 1597 ntBASIC4.36□□□□□ -1.71
CLHC1Q8NHS4 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
CLHC1Q8NHS4 AL133412.1-201ENST00000380194 2992 ntBASIC4.35□□□□□ -1.71
CLHC1Q8NHS4 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CLHC1Q8NHS4 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CLHC1Q8NHS4 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
CLHC1Q8NHS4 RN7SKP149-201ENST00000363008 344 ntBASIC4.35□□□□□ -1.71
CLHC1Q8NHS4 RNU1-63P-201ENST00000383902 164 ntBASIC4.35□□□□□ -1.71
CLHC1Q8NHS4 Z98745.1-201ENST00000402553 494 ntBASIC4.35□□□□□ -1.71
CLHC1Q8NHS4 HDGFP1-201ENST00000405943 252 ntBASIC4.35□□□□□ -1.71
CLHC1Q8NHS4 AL034374.1-201ENST00000406329 351 ntBASIC4.35□□□□□ -1.71
CLHC1Q8NHS4 AC009237.10-201ENST00000414112 510 ntBASIC4.35□□□□□ -1.71
CLHC1Q8NHS4 AC016769.2-201ENST00000414815 475 ntBASIC4.35□□□□□ -1.71
CLHC1Q8NHS4 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC4.35□□□□□ -1.71
CLHC1Q8NHS4 OR2X1P-201ENST00000421144 687 ntBASIC4.35□□□□□ -1.71
CLHC1Q8NHS4 AC004448.2-201ENST00000422360 586 ntBASIC4.35□□□□□ -1.71
CLHC1Q8NHS4 AC016831.4-201ENST00000438302 307 ntBASIC4.35□□□□□ -1.71
CLHC1Q8NHS4 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC4.35□□□□□ -1.71
CLHC1Q8NHS4 RPS27AP15-201ENST00000447672 466 ntBASIC4.35□□□□□ -1.71
CLHC1Q8NHS4 AC105918.1-201ENST00000474399 838 ntBASIC4.35□□□□□ -1.71
CLHC1Q8NHS4 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC4.35□□□□□ -1.71
CLHC1Q8NHS4 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC4.35□□□□□ -1.71
CLHC1Q8NHS4 STMN1P2-201ENST00000508435 439 ntBASIC4.35□□□□□ -1.71
CLHC1Q8NHS4 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CLHC1Q8NHS4 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC4.35□□□□□ -1.71
CLHC1Q8NHS4 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC4.35□□□□□ -1.71
CLHC1Q8NHS4 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC4.35□□□□□ -1.71
CLHC1Q8NHS4 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC4.35□□□□□ -1.71
CLHC1Q8NHS4 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC4.35□□□□□ -1.71
CLHC1Q8NHS4 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC4.35□□□□□ -1.71
CLHC1Q8NHS4 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CLHC1Q8NHS4 ADAD1P2-201ENST00000588476 646 ntBASIC4.35□□□□□ -1.71
CLHC1Q8NHS4 SLC25A36P1-201ENST00000590111 465 ntBASIC4.35□□□□□ -1.71
CLHC1Q8NHS4 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC4.35□□□□□ -1.71
CLHC1Q8NHS4 AC090181.2-201ENST00000602975 672 ntBASIC4.35□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 87.1 ms