Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 AC007204.2-201ENST00000615022 616 ntBASIC3.92□□□□□ -1.78
CCDC71LQ8N9Z2 AC004825.2-201ENST00000616634 455 ntBASIC3.92□□□□□ -1.78
CCDC71LQ8N9Z2 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC3.92□□□□□ -1.78
CCDC71LQ8N9Z2 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC3.92□□□□□ -1.78
CCDC71LQ8N9Z2 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
CCDC71LQ8N9Z2 A2MP1-204ENST00000566278 4130 ntBASIC3.92□□□□□ -1.78
CCDC71LQ8N9Z2 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
CCDC71LQ8N9Z2 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC3.92□□□□□ -1.78
CCDC71LQ8N9Z2 AC017104.4-201ENST00000636283 1592 ntBASIC3.92□□□□□ -1.78
CCDC71LQ8N9Z2 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.92□□□□□ -1.78
CCDC71LQ8N9Z2 MAPK10-263ENST00000641052 4307 ntBASIC3.92□□□□□ -1.78
CCDC71LQ8N9Z2 DLD-204ENST00000437604 1859 ntTSL 2 BASIC3.92□□□□□ -1.78
CCDC71LQ8N9Z2 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC3.92□□□□□ -1.78
CCDC71LQ8N9Z2 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC3.91□□□□□ -1.78
CCDC71LQ8N9Z2 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC3.91□□□□□ -1.78
CCDC71LQ8N9Z2 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
CCDC71LQ8N9Z2 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC3.91□□□□□ -1.78
CCDC71LQ8N9Z2 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
CCDC71LQ8N9Z2 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC3.91□□□□□ -1.78
CCDC71LQ8N9Z2 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CCDC71LQ8N9Z2 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CCDC71LQ8N9Z2 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC3.91□□□□□ -1.78
CCDC71LQ8N9Z2 AC087190.4-201ENST00000574616 8334 ntBASIC3.91□□□□□ -1.78
CCDC71LQ8N9Z2 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
CCDC71LQ8N9Z2 RNA5SP28-201ENST00000363841 119 ntBASIC3.91□□□□□ -1.78
CCDC71LQ8N9Z2 RNA5SP132-201ENST00000364725 118 ntBASIC3.91□□□□□ -1.78
CCDC71LQ8N9Z2 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
CCDC71LQ8N9Z2 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC3.91□□□□□ -1.78
CCDC71LQ8N9Z2 YAF2-202ENST00000380790 1211 ntTSL 2 BASIC3.91□□□□□ -1.78
CCDC71LQ8N9Z2 SNORA70-201ENST00000384436 135 ntBASIC3.91□□□□□ -1.78
CCDC71LQ8N9Z2 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CCDC71LQ8N9Z2 RNA5SP239-201ENST00000410218 129 ntBASIC3.91□□□□□ -1.78
CCDC71LQ8N9Z2 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC3.91□□□□□ -1.78
CCDC71LQ8N9Z2 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC3.91□□□□□ -1.78
CCDC71LQ8N9Z2 AC005033.1-201ENST00000428904 813 ntBASIC3.91□□□□□ -1.78
CCDC71LQ8N9Z2 RPL23AP25-201ENST00000430973 463 ntBASIC3.91□□□□□ -1.78
CCDC71LQ8N9Z2 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC3.91□□□□□ -1.78
CCDC71LQ8N9Z2 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC3.91□□□□□ -1.78
CCDC71LQ8N9Z2 PRPF38AP2-201ENST00000438179 851 ntBASIC3.91□□□□□ -1.78
CCDC71LQ8N9Z2 SPRYD7P1-201ENST00000443861 570 ntBASIC3.91□□□□□ -1.78
CCDC71LQ8N9Z2 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC3.91□□□□□ -1.78
CCDC71LQ8N9Z2 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC3.91□□□□□ -1.78
CCDC71LQ8N9Z2 AL157827.1-201ENST00000447622 132 ntBASIC3.91□□□□□ -1.78
CCDC71LQ8N9Z2 LINC01487-201ENST00000462531 905 ntTSL 2 BASIC3.91□□□□□ -1.78
CCDC71LQ8N9Z2 OR2AO1P-201ENST00000476497 403 ntBASIC3.91□□□□□ -1.78
CCDC71LQ8N9Z2 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC3.91□□□□□ -1.78
CCDC71LQ8N9Z2 RPL37AP8-201ENST00000494116 276 ntBASIC3.91□□□□□ -1.78
CCDC71LQ8N9Z2 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC3.91□□□□□ -1.78
CCDC71LQ8N9Z2 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
CCDC71LQ8N9Z2 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC3.91□□□□□ -1.78
CCDC71LQ8N9Z2 BX510359.5-201ENST00000515651 304 ntBASIC3.91□□□□□ -1.78
CCDC71LQ8N9Z2 AC100770.1-201ENST00000532310 322 ntBASIC3.91□□□□□ -1.78
CCDC71LQ8N9Z2 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC3.91□□□□□ -1.78
CCDC71LQ8N9Z2 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
CCDC71LQ8N9Z2 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC3.91□□□□□ -1.78
CCDC71LQ8N9Z2 AC023158.1-201ENST00000561632 1025 ntBASIC3.91□□□□□ -1.78
CCDC71LQ8N9Z2 AL121834.1-201ENST00000572284 509 ntBASIC3.91□□□□□ -1.78
CCDC71LQ8N9Z2 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC3.91□□□□□ -1.78
CCDC71LQ8N9Z2 AL589674.2-201ENST00000604304 337 ntBASIC3.91□□□□□ -1.78
CCDC71LQ8N9Z2 AC012557.1-201ENST00000607115 611 ntBASIC3.91□□□□□ -1.78
CCDC71LQ8N9Z2 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC3.91□□□□□ -1.78
CCDC71LQ8N9Z2 AL022401.1-201ENST00000619498 108 ntBASIC3.91□□□□□ -1.78
CCDC71LQ8N9Z2 AC007342.7-201ENST00000624610 2337 ntBASIC3.91□□□□□ -1.78
CCDC71LQ8N9Z2 AL356121.2-201ENST00000624715 780 ntBASIC3.91□□□□□ -1.78
CCDC71LQ8N9Z2 CR381572.2-201ENST00000624852 397 ntBASIC3.91□□□□□ -1.78
CCDC71LQ8N9Z2 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC3.91□□□□□ -1.78
CCDC71LQ8N9Z2 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC3.91□□□□□ -1.78
CCDC71LQ8N9Z2 CASC19-264ENST00000641912 1184 ntBASIC3.91□□□□□ -1.78
CCDC71LQ8N9Z2 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.91□□□□□ -1.78
CCDC71LQ8N9Z2 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC3.91□□□□□ -1.78
CCDC71LQ8N9Z2 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC3.91□□□□□ -1.78
CCDC71LQ8N9Z2 AC022893.2-201ENST00000564832 3296 ntBASIC3.9□□□□□ -1.78
CCDC71LQ8N9Z2 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
CCDC71LQ8N9Z2 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.78
CCDC71LQ8N9Z2 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
CCDC71LQ8N9Z2 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
CCDC71LQ8N9Z2 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC3.9□□□□□ -1.78
CCDC71LQ8N9Z2 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.78
CCDC71LQ8N9Z2 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC3.9□□□□□ -1.78
CCDC71LQ8N9Z2 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC3.9□□□□□ -1.78
CCDC71LQ8N9Z2 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC3.9□□□□□ -1.78
CCDC71LQ8N9Z2 THAP12P4-201ENST00000528321 2266 ntBASIC3.9□□□□□ -1.79
CCDC71LQ8N9Z2 MIR3074-201ENST00000384885 81 ntBASIC3.9□□□□□ -1.79
CCDC71LQ8N9Z2 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
CCDC71LQ8N9Z2 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
CCDC71LQ8N9Z2 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
CCDC71LQ8N9Z2 DNAJA1P4-201ENST00000406473 1166 ntBASIC3.9□□□□□ -1.79
CCDC71LQ8N9Z2 RNA5SP178-201ENST00000410380 128 ntBASIC3.9□□□□□ -1.79
CCDC71LQ8N9Z2 AC005529.1-201ENST00000411969 289 ntTSL 5 BASIC3.9□□□□□ -1.79
CCDC71LQ8N9Z2 USP9YP19-201ENST00000412165 485 ntBASIC3.9□□□□□ -1.79
CCDC71LQ8N9Z2 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC3.9□□□□□ -1.79
CCDC71LQ8N9Z2 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
CCDC71LQ8N9Z2 AL138785.1-201ENST00000425821 331 ntBASIC3.9□□□□□ -1.79
CCDC71LQ8N9Z2 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
CCDC71LQ8N9Z2 FGF12-202ENST00000430714 603 ntTSL 2 BASIC3.9□□□□□ -1.79
CCDC71LQ8N9Z2 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC3.9□□□□□ -1.79
CCDC71LQ8N9Z2 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC3.9□□□□□ -1.79
CCDC71LQ8N9Z2 AP000281.1-201ENST00000444036 316 ntBASIC3.9□□□□□ -1.79
CCDC71LQ8N9Z2 SLC25A18P1-201ENST00000449385 454 ntBASIC3.9□□□□□ -1.79
CCDC71LQ8N9Z2 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC3.9□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 124.6 ms