Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 AC146944.2-203ENST00000502493 354 ntBASIC4.76□□□□□ -1.65
CCDC50Q8IVM0 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CCDC50Q8IVM0 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC4.76□□□□□ -1.65
CCDC50Q8IVM0 AL133372.2-203ENST00000508469 922 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CCDC50Q8IVM0 LINC02278-201ENST00000512170 500 ntTSL 5 BASIC4.76□□□□□ -1.65
CCDC50Q8IVM0 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC4.76□□□□□ -1.65
CCDC50Q8IVM0 AC139495.1-202ENST00000513164 354 ntBASIC4.76□□□□□ -1.65
CCDC50Q8IVM0 AC015795.1-201ENST00000513669 327 ntBASIC4.76□□□□□ -1.65
CCDC50Q8IVM0 IGLV3-26-201ENST00000520756 302 ntBASIC4.76□□□□□ -1.65
CCDC50Q8IVM0 AC008676.3-201ENST00000521237 435 ntBASIC4.76□□□□□ -1.65
CCDC50Q8IVM0 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC4.76□□□□□ -1.65
CCDC50Q8IVM0 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC4.76□□□□□ -1.65
CCDC50Q8IVM0 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC4.76□□□□□ -1.65
CCDC50Q8IVM0 AC105129.1-201ENST00000560250 297 ntBASIC4.76□□□□□ -1.65
CCDC50Q8IVM0 AC105020.2-201ENST00000564683 572 ntTSL 5 BASIC4.76□□□□□ -1.65
CCDC50Q8IVM0 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC4.76□□□□□ -1.65
CCDC50Q8IVM0 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC4.76□□□□□ -1.65
CCDC50Q8IVM0 OR7E18P-201ENST00000592589 702 ntBASIC4.76□□□□□ -1.65
CCDC50Q8IVM0 AC025946.2-201ENST00000603398 234 ntBASIC4.76□□□□□ -1.65
CCDC50Q8IVM0 AC133644.2-201ENST00000608142 540 ntBASIC4.76□□□□□ -1.65
CCDC50Q8IVM0 AC117490.2-201ENST00000610042 594 ntBASIC4.76□□□□□ -1.65
CCDC50Q8IVM0 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.76□□□□□ -1.65
CCDC50Q8IVM0 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC4.76□□□□□ -1.65
CCDC50Q8IVM0 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC4.76□□□□□ -1.65
CCDC50Q8IVM0 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC4.76□□□□□ -1.65
CCDC50Q8IVM0 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC4.76□□□□□ -1.65
CCDC50Q8IVM0 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.76□□□□□ -1.65
CCDC50Q8IVM0 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.76□□□□□ -1.65
CCDC50Q8IVM0 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC4.76□□□□□ -1.65
CCDC50Q8IVM0 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.76□□□□□ -1.65
CCDC50Q8IVM0 AC011266.1-201ENST00000624119 3569 ntBASIC4.76□□□□□ -1.65
CCDC50Q8IVM0 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CCDC50Q8IVM0 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
CCDC50Q8IVM0 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CCDC50Q8IVM0 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CCDC50Q8IVM0 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.75□□□□□ -1.65
CCDC50Q8IVM0 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
CCDC50Q8IVM0 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CCDC50Q8IVM0 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
CCDC50Q8IVM0 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CCDC50Q8IVM0 NXPH1-205ENST00000602349 1953 ntBASIC4.75□□□□□ -1.65
CCDC50Q8IVM0 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
CCDC50Q8IVM0 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CCDC50Q8IVM0 AL590240.1-201ENST00000334118 313 ntBASIC4.75□□□□□ -1.65
CCDC50Q8IVM0 RNA5SP502-201ENST00000362694 119 ntBASIC4.75□□□□□ -1.65
CCDC50Q8IVM0 RNU1-63P-201ENST00000383902 164 ntBASIC4.75□□□□□ -1.65
CCDC50Q8IVM0 MIR513A2-201ENST00000385249 127 ntBASIC4.75□□□□□ -1.65
CCDC50Q8IVM0 BX510359.2-201ENST00000417920 305 ntBASIC4.75□□□□□ -1.65
CCDC50Q8IVM0 AL391219.1-201ENST00000422570 483 ntBASIC4.75□□□□□ -1.65
CCDC50Q8IVM0 RPS12P10-201ENST00000427031 377 ntBASIC4.75□□□□□ -1.65
CCDC50Q8IVM0 AL627308.1-201ENST00000435693 821 ntBASIC4.75□□□□□ -1.65
CCDC50Q8IVM0 AC005154.2-201ENST00000438110 379 ntBASIC4.75□□□□□ -1.65
CCDC50Q8IVM0 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC4.75□□□□□ -1.65
CCDC50Q8IVM0 GEMIN8P3-201ENST00000445417 720 ntBASIC4.75□□□□□ -1.65
CCDC50Q8IVM0 RPS27AP15-201ENST00000447672 466 ntBASIC4.75□□□□□ -1.65
CCDC50Q8IVM0 RPL7P61-201ENST00000451721 751 ntBASIC4.75□□□□□ -1.65
CCDC50Q8IVM0 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC4.75□□□□□ -1.65
CCDC50Q8IVM0 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC4.75□□□□□ -1.65
CCDC50Q8IVM0 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
CCDC50Q8IVM0 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC4.75□□□□□ -1.65
CCDC50Q8IVM0 OR1F2P-201ENST00000570470 933 ntBASIC4.75□□□□□ -1.65
CCDC50Q8IVM0 FAM106CP-201ENST00000582212 507 ntBASIC4.75□□□□□ -1.65
CCDC50Q8IVM0 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.75□□□□□ -1.65
CCDC50Q8IVM0 AC098935.2-201ENST00000604222 466 ntBASIC4.75□□□□□ -1.65
CCDC50Q8IVM0 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CCDC50Q8IVM0 AC068870.2-201ENST00000620635 389 ntBASIC4.75□□□□□ -1.65
CCDC50Q8IVM0 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
CCDC50Q8IVM0 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC4.75□□□□□ -1.65
CCDC50Q8IVM0 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.75□□□□□ -1.65
CCDC50Q8IVM0 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC4.75□□□□□ -1.65
CCDC50Q8IVM0 ZNF137P-201ENST00000456718 1920 ntBASIC4.75□□□□□ -1.65
CCDC50Q8IVM0 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CCDC50Q8IVM0 KARSP3-201ENST00000571212 1504 ntBASIC4.75□□□□□ -1.65
CCDC50Q8IVM0 HSPA8P17-201ENST00000427029 1382 ntBASIC4.75□□□□□ -1.65
CCDC50Q8IVM0 AC105074.1-201ENST00000623380 3095 ntBASIC4.75□□□□□ -1.65
CCDC50Q8IVM0 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
CCDC50Q8IVM0 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CCDC50Q8IVM0 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC4.75□□□□□ -1.65
CCDC50Q8IVM0 AC132825.1-201ENST00000463573 2247 ntBASIC4.74□□□□□ -1.65
CCDC50Q8IVM0 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
CCDC50Q8IVM0 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC4.74□□□□□ -1.65
CCDC50Q8IVM0 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC4.74□□□□□ -1.65
CCDC50Q8IVM0 MFSD4BP1-201ENST00000513330 1552 ntBASIC4.74□□□□□ -1.65
CCDC50Q8IVM0 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
CCDC50Q8IVM0 AC139769.1-204ENST00000472297 1931 ntBASIC4.74□□□□□ -1.65
CCDC50Q8IVM0 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
CCDC50Q8IVM0 RNA5SP151-201ENST00000365632 117 ntBASIC4.74□□□□□ -1.65
CCDC50Q8IVM0 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
CCDC50Q8IVM0 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CCDC50Q8IVM0 AL645927.1-201ENST00000396783 406 ntBASIC4.74□□□□□ -1.65
CCDC50Q8IVM0 RN7SKP100-201ENST00000411258 284 ntBASIC4.74□□□□□ -1.65
CCDC50Q8IVM0 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC4.74□□□□□ -1.65
CCDC50Q8IVM0 CENPIP1-201ENST00000425713 902 ntBASIC4.74□□□□□ -1.65
CCDC50Q8IVM0 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC4.74□□□□□ -1.65
CCDC50Q8IVM0 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC4.74□□□□□ -1.65
CCDC50Q8IVM0 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.74□□□□□ -1.65
CCDC50Q8IVM0 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC4.74□□□□□ -1.65
CCDC50Q8IVM0 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC4.74□□□□□ -1.65
CCDC50Q8IVM0 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC4.74□□□□□ -1.65
CCDC50Q8IVM0 AC091685.2-201ENST00000454924 864 ntBASIC4.74□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 85.4 ms