Protein–RNA interactions for Protein: Q8IV63

VRK3, Inactive serine/threonine-protein kinase VRK3, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3Q8IV63 Y_RNA.695-201ENST00000516715 107 ntBASIC5.34□□□□□ -1.55
VRK3Q8IV63 RN7SKP99-201ENST00000517028 307 ntBASIC5.34□□□□□ -1.55
VRK3Q8IV63 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC5.34□□□□□ -1.55
VRK3Q8IV63 MTCYBP19-201ENST00000517463 1124 ntBASIC5.34□□□□□ -1.55
VRK3Q8IV63 HIGD1AP10-201ENST00000527837 282 ntBASIC5.34□□□□□ -1.55
VRK3Q8IV63 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC5.34□□□□□ -1.55
VRK3Q8IV63 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC5.34□□□□□ -1.55
VRK3Q8IV63 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC5.34□□□□□ -1.55
VRK3Q8IV63 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC5.34□□□□□ -1.55
VRK3Q8IV63 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC5.34□□□□□ -1.55
VRK3Q8IV63 AC011611.5-201ENST00000552477 578 ntBASIC5.34□□□□□ -1.55
VRK3Q8IV63 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC5.34□□□□□ -1.55
VRK3Q8IV63 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
VRK3Q8IV63 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC5.34□□□□□ -1.55
VRK3Q8IV63 AC012146.2-201ENST00000576545 416 ntBASIC5.34□□□□□ -1.55
VRK3Q8IV63 MIR3611-201ENST00000584484 83 ntBASIC5.34□□□□□ -1.55
VRK3Q8IV63 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC5.34□□□□□ -1.55
VRK3Q8IV63 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC5.34□□□□□ -1.55
VRK3Q8IV63 XIST-210ENST00000602863 775 ntTSL 3 BASIC5.34□□□□□ -1.55
VRK3Q8IV63 AL031281.1-201ENST00000604049 488 ntBASIC5.34□□□□□ -1.55
VRK3Q8IV63 CLPTM1LP1-201ENST00000604519 484 ntBASIC5.34□□□□□ -1.55
VRK3Q8IV63 AC016727.1-205ENST00000605437 569 ntBASIC5.34□□□□□ -1.55
VRK3Q8IV63 AF250324.2-201ENST00000608299 610 ntBASIC5.34□□□□□ -1.55
VRK3Q8IV63 AL133370.2-201ENST00000619934 439 ntBASIC5.34□□□□□ -1.55
VRK3Q8IV63 AC015660.5-201ENST00000623238 564 ntBASIC5.34□□□□□ -1.55
VRK3Q8IV63 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
VRK3Q8IV63 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
VRK3Q8IV63 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
VRK3Q8IV63 AC100757.1-201ENST00000616872 1835 ntBASIC5.34□□□□□ -1.55
VRK3Q8IV63 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
VRK3Q8IV63 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.56
VRK3Q8IV63 BCORP1-203ENST00000513194 5093 ntBASIC5.34□□□□□ -1.56
VRK3Q8IV63 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.56
VRK3Q8IV63 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC5.34□□□□□ -1.56
VRK3Q8IV63 AC073544.1-201ENST00000600110 1595 ntBASIC5.33□□□□□ -1.56
VRK3Q8IV63 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC5.33□□□□□ -1.56
VRK3Q8IV63 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
VRK3Q8IV63 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
VRK3Q8IV63 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC5.33□□□□□ -1.56
VRK3Q8IV63 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC5.33□□□□□ -1.56
VRK3Q8IV63 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
VRK3Q8IV63 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
VRK3Q8IV63 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
VRK3Q8IV63 RNA5SP319-201ENST00000362768 119 ntBASIC5.33□□□□□ -1.56
VRK3Q8IV63 RN7SKP145-201ENST00000363291 303 ntBASIC5.33□□□□□ -1.56
VRK3Q8IV63 SNORA70.6-201ENST00000383934 134 ntBASIC5.33□□□□□ -1.56
VRK3Q8IV63 SNORA40.2-201ENST00000390847 128 ntBASIC5.33□□□□□ -1.56
VRK3Q8IV63 OR4K12P-201ENST00000406538 961 ntBASIC5.33□□□□□ -1.56
VRK3Q8IV63 OR8G2P-201ENST00000412796 908 ntBASIC5.33□□□□□ -1.56
VRK3Q8IV63 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC5.33□□□□□ -1.56
VRK3Q8IV63 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC5.33□□□□□ -1.56
VRK3Q8IV63 AC012519.1-201ENST00000424588 610 ntBASIC5.33□□□□□ -1.56
VRK3Q8IV63 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC5.33□□□□□ -1.56
VRK3Q8IV63 MTCO2P19-201ENST00000427513 598 ntBASIC5.33□□□□□ -1.56
VRK3Q8IV63 AC005189.1-201ENST00000431286 310 ntBASIC5.33□□□□□ -1.56
VRK3Q8IV63 MED28P3-201ENST00000444288 531 ntBASIC5.33□□□□□ -1.56
VRK3Q8IV63 AC023271.1-201ENST00000445936 1090 ntBASIC5.33□□□□□ -1.56
VRK3Q8IV63 AC007327.1-201ENST00000447461 264 ntBASIC5.33□□□□□ -1.56
VRK3Q8IV63 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC5.33□□□□□ -1.56
VRK3Q8IV63 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC5.33□□□□□ -1.56
VRK3Q8IV63 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC5.33□□□□□ -1.56
VRK3Q8IV63 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC5.33□□□□□ -1.56
VRK3Q8IV63 AC107015.1-201ENST00000466902 747 ntBASIC5.33□□□□□ -1.56
VRK3Q8IV63 AC100832.1-201ENST00000471945 383 ntBASIC5.33□□□□□ -1.56
VRK3Q8IV63 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC5.33□□□□□ -1.56
VRK3Q8IV63 AC016687.1-201ENST00000482574 353 ntBASIC5.33□□□□□ -1.56
VRK3Q8IV63 RN7SL184P-201ENST00000488308 297 ntBASIC5.33□□□□□ -1.56
VRK3Q8IV63 RN7SL547P-201ENST00000490793 290 ntBASIC5.33□□□□□ -1.56
VRK3Q8IV63 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC5.33□□□□□ -1.56
VRK3Q8IV63 AC023050.1-201ENST00000498198 304 ntBASIC5.33□□□□□ -1.56
VRK3Q8IV63 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC5.33□□□□□ -1.56
VRK3Q8IV63 AC112198.1-201ENST00000505369 1220 ntBASIC5.33□□□□□ -1.56
VRK3Q8IV63 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC5.33□□□□□ -1.56
VRK3Q8IV63 MTND6P2-201ENST00000512226 524 ntBASIC5.33□□□□□ -1.56
VRK3Q8IV63 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC5.33□□□□□ -1.56
VRK3Q8IV63 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC5.33□□□□□ -1.56
VRK3Q8IV63 SCARNA20.4-201ENST00000516969 131 ntBASIC5.33□□□□□ -1.56
VRK3Q8IV63 MAL2-205ENST00000521048 575 ntTSL 4 BASIC5.33□□□□□ -1.56
VRK3Q8IV63 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC5.33□□□□□ -1.56
VRK3Q8IV63 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC5.33□□□□□ -1.56
VRK3Q8IV63 AP004607.2-201ENST00000533949 322 ntBASIC5.33□□□□□ -1.56
VRK3Q8IV63 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
VRK3Q8IV63 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC5.33□□□□□ -1.56
VRK3Q8IV63 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC5.33□□□□□ -1.56
VRK3Q8IV63 WDR61-205ENST00000558459 884 ntTSL 3 BASIC5.33□□□□□ -1.56
VRK3Q8IV63 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC5.33□□□□□ -1.56
VRK3Q8IV63 AP005205.1-201ENST00000563503 508 ntBASIC5.33□□□□□ -1.56
VRK3Q8IV63 ISCA1P3-201ENST00000577104 373 ntBASIC5.33□□□□□ -1.56
VRK3Q8IV63 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC5.33□□□□□ -1.56
VRK3Q8IV63 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC5.33□□□□□ -1.56
VRK3Q8IV63 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC5.33□□□□□ -1.56
VRK3Q8IV63 AC012254.4-201ENST00000588843 273 ntBASIC5.33□□□□□ -1.56
VRK3Q8IV63 AC021749.1-201ENST00000604322 607 ntBASIC5.33□□□□□ -1.56
VRK3Q8IV63 AL353621.2-201ENST00000605340 133 ntBASIC5.33□□□□□ -1.56
VRK3Q8IV63 AC107075.1-201ENST00000613695 314 ntBASIC5.33□□□□□ -1.56
VRK3Q8IV63 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
VRK3Q8IV63 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC5.33□□□□□ -1.56
VRK3Q8IV63 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
VRK3Q8IV63 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
VRK3Q8IV63 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC5.33□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 89.2 ms