Protein–RNA interactions for Protein: Q8IV32

CCDC71, Coiled-coil domain-containing protein 71, humanhuman

Predicted RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71Q8IV32 MTND2P11-201ENST00000423638 648 ntBASIC4.46□□□□□ -1.7
CCDC71Q8IV32 EIF2S2P3-201ENST00000428356 999 ntBASIC4.46□□□□□ -1.7
CCDC71Q8IV32 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC4.46□□□□□ -1.7
CCDC71Q8IV32 AC092162.1-201ENST00000432828 434 ntBASIC4.46□□□□□ -1.7
CCDC71Q8IV32 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC4.46□□□□□ -1.7
CCDC71Q8IV32 AL691517.1-201ENST00000440833 1235 ntBASIC4.46□□□□□ -1.7
CCDC71Q8IV32 OR7E125P-201ENST00000443450 846 ntBASIC4.46□□□□□ -1.7
CCDC71Q8IV32 AL354714.3-201ENST00000447284 493 ntBASIC4.46□□□□□ -1.7
CCDC71Q8IV32 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC4.46□□□□□ -1.7
CCDC71Q8IV32 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC4.46□□□□□ -1.7
CCDC71Q8IV32 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC4.46□□□□□ -1.7
CCDC71Q8IV32 AC092905.1-201ENST00000467527 949 ntBASIC4.46□□□□□ -1.7
CCDC71Q8IV32 AC096741.1-201ENST00000472250 846 ntBASIC4.46□□□□□ -1.7
CCDC71Q8IV32 NDUFA5P9-201ENST00000472609 340 ntBASIC4.46□□□□□ -1.7
CCDC71Q8IV32 RN7SL817P-201ENST00000480777 288 ntBASIC4.46□□□□□ -1.7
CCDC71Q8IV32 AC090543.1-201ENST00000492168 485 ntBASIC4.46□□□□□ -1.7
CCDC71Q8IV32 SSR3-208ENST00000496050 579 ntTSL 4 BASIC4.46□□□□□ -1.7
CCDC71Q8IV32 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC4.46□□□□□ -1.7
CCDC71Q8IV32 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC4.46□□□□□ -1.7
CCDC71Q8IV32 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
CCDC71Q8IV32 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
CCDC71Q8IV32 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC4.46□□□□□ -1.7
CCDC71Q8IV32 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC4.46□□□□□ -1.7
CCDC71Q8IV32 SNORD39.2-201ENST00000579995 76 ntBASIC4.46□□□□□ -1.7
CCDC71Q8IV32 AC209154.1-201ENST00000582156 337 ntBASIC4.46□□□□□ -1.7
CCDC71Q8IV32 EIF1P5-201ENST00000585002 234 ntBASIC4.46□□□□□ -1.7
CCDC71Q8IV32 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC4.46□□□□□ -1.7
CCDC71Q8IV32 BMS1P7-201ENST00000602440 1052 ntBASIC4.46□□□□□ -1.7
CCDC71Q8IV32 AC068790.4-201ENST00000602474 263 ntBASIC4.46□□□□□ -1.7
CCDC71Q8IV32 OR4H6P-202ENST00000603819 340 ntBASIC4.46□□□□□ -1.7
CCDC71Q8IV32 AC005021.1-201ENST00000608730 355 ntBASIC4.46□□□□□ -1.7
CCDC71Q8IV32 AC140113.4-201ENST00000622087 222 ntBASIC4.46□□□□□ -1.7
CCDC71Q8IV32 AL356490.1-201ENST00000623079 479 ntBASIC4.46□□□□□ -1.7
CCDC71Q8IV32 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC4.46□□□□□ -1.7
CCDC71Q8IV32 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC4.46□□□□□ -1.7
CCDC71Q8IV32 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.46□□□□□ -1.7
CCDC71Q8IV32 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.46□□□□□ -1.7
CCDC71Q8IV32 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
CCDC71Q8IV32 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.46□□□□□ -1.7
CCDC71Q8IV32 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC4.46□□□□□ -1.7
CCDC71Q8IV32 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
CCDC71Q8IV32 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC4.46□□□□□ -1.7
CCDC71Q8IV32 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
CCDC71Q8IV32 AC099654.2-201ENST00000433031 1980 ntBASIC4.45□□□□□ -1.7
CCDC71Q8IV32 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
CCDC71Q8IV32 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
CCDC71Q8IV32 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CCDC71Q8IV32 AL359922.3-201ENST00000624779 1670 ntBASIC4.45□□□□□ -1.7
CCDC71Q8IV32 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CCDC71Q8IV32 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
CCDC71Q8IV32 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
CCDC71Q8IV32 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
CCDC71Q8IV32 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC4.45□□□□□ -1.7
CCDC71Q8IV32 GLULP6-201ENST00000399502 913 ntBASIC4.45□□□□□ -1.7
CCDC71Q8IV32 ARL4AP5-201ENST00000404372 599 ntBASIC4.45□□□□□ -1.7
CCDC71Q8IV32 AC119751.6-201ENST00000416712 186 ntBASIC4.45□□□□□ -1.7
CCDC71Q8IV32 BTF3P9-201ENST00000418784 283 ntBASIC4.45□□□□□ -1.7
CCDC71Q8IV32 C4BPAP2-201ENST00000428434 478 ntBASIC4.45□□□□□ -1.7
CCDC71Q8IV32 DNAJC19P7-201ENST00000428811 344 ntBASIC4.45□□□□□ -1.7
CCDC71Q8IV32 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CCDC71Q8IV32 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC4.45□□□□□ -1.7
CCDC71Q8IV32 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC4.45□□□□□ -1.7
CCDC71Q8IV32 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC4.45□□□□□ -1.7
CCDC71Q8IV32 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC4.45□□□□□ -1.7
CCDC71Q8IV32 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC4.45□□□□□ -1.7
CCDC71Q8IV32 AC004938.1-201ENST00000438468 308 ntBASIC4.45□□□□□ -1.7
CCDC71Q8IV32 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC4.45□□□□□ -1.7
CCDC71Q8IV32 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC4.45□□□□□ -1.7
CCDC71Q8IV32 AL355870.1-201ENST00000448272 454 ntTSL 3 BASIC4.45□□□□□ -1.7
CCDC71Q8IV32 NPM1P39-201ENST00000449818 867 ntBASIC4.45□□□□□ -1.7
CCDC71Q8IV32 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC4.45□□□□□ -1.7
CCDC71Q8IV32 LARP7P4-201ENST00000481075 878 ntBASIC4.45□□□□□ -1.7
CCDC71Q8IV32 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC4.45□□□□□ -1.7
CCDC71Q8IV32 GAPDHP56-201ENST00000506031 988 ntBASIC4.45□□□□□ -1.7
CCDC71Q8IV32 RNU6-467P-201ENST00000517027 110 ntBASIC4.45□□□□□ -1.7
CCDC71Q8IV32 MAL2-201ENST00000522112 573 ntTSL 4 BASIC4.45□□□□□ -1.7
CCDC71Q8IV32 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC4.45□□□□□ -1.7
CCDC71Q8IV32 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC4.45□□□□□ -1.7
CCDC71Q8IV32 AP005119.2-201ENST00000579735 1105 ntBASIC4.45□□□□□ -1.7
CCDC71Q8IV32 FAM106CP-201ENST00000582212 507 ntBASIC4.45□□□□□ -1.7
CCDC71Q8IV32 MIR4697-201ENST00000582977 78 ntBASIC4.45□□□□□ -1.7
CCDC71Q8IV32 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC4.45□□□□□ -1.7
CCDC71Q8IV32 AP004372.1-201ENST00000604842 844 ntBASIC4.45□□□□□ -1.7
CCDC71Q8IV32 NAA60-237ENST00000615865 326 ntTSL 5 BASIC4.45□□□□□ -1.7
CCDC71Q8IV32 AL049794.2-201ENST00000616301 365 ntBASIC4.45□□□□□ -1.7
CCDC71Q8IV32 AC234782.5-201ENST00000617723 324 ntBASIC4.45□□□□□ -1.7
CCDC71Q8IV32 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC4.45□□□□□ -1.7
CCDC71Q8IV32 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
CCDC71Q8IV32 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
CCDC71Q8IV32 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC4.45□□□□□ -1.7
CCDC71Q8IV32 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC4.45□□□□□ -1.7
CCDC71Q8IV32 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC4.45□□□□□ -1.7
CCDC71Q8IV32 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CCDC71Q8IV32 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC4.45□□□□□ -1.7
CCDC71Q8IV32 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC4.45□□□□□ -1.7
CCDC71Q8IV32 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
CCDC71Q8IV32 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CCDC71Q8IV32 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
CCDC71Q8IV32 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.44□□□□□ -1.7
CCDC71Q8IV32 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 92.5 ms