Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC5.84□□□□□ -1.47
ATG4DQ86TL0 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC5.84□□□□□ -1.47
ATG4DQ86TL0 AC008957.1-203ENST00000508745 589 ntTSL 3 BASIC5.84□□□□□ -1.47
ATG4DQ86TL0 MTND6P2-201ENST00000512226 524 ntBASIC5.84□□□□□ -1.47
ATG4DQ86TL0 RN7SKP31-201ENST00000516354 278 ntBASIC5.84□□□□□ -1.47
ATG4DQ86TL0 RN7SKP116-201ENST00000516902 319 ntBASIC5.84□□□□□ -1.47
ATG4DQ86TL0 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC5.84□□□□□ -1.47
ATG4DQ86TL0 ALG9-IT1-201ENST00000531305 684 ntTSL 3 BASIC5.84□□□□□ -1.47
ATG4DQ86TL0 AC090424.1-201ENST00000535243 736 ntBASIC5.84□□□□□ -1.47
ATG4DQ86TL0 AC243972.3-201ENST00000539655 198 ntBASIC5.84□□□□□ -1.47
ATG4DQ86TL0 PDCD5P1-201ENST00000543528 309 ntBASIC5.84□□□□□ -1.47
ATG4DQ86TL0 AC008055.1-201ENST00000547032 609 ntBASIC5.84□□□□□ -1.47
ATG4DQ86TL0 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC5.84□□□□□ -1.47
ATG4DQ86TL0 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC5.84□□□□□ -1.47
ATG4DQ86TL0 AC103740.1-202ENST00000558404 542 ntTSL 4 BASIC5.84□□□□□ -1.47
ATG4DQ86TL0 MIR4666A-201ENST00000580160 79 ntBASIC5.84□□□□□ -1.47
ATG4DQ86TL0 AC025809.1-201ENST00000585336 560 ntTSL 4 BASIC5.84□□□□□ -1.47
ATG4DQ86TL0 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC5.84□□□□□ -1.47
ATG4DQ86TL0 MTCO2P22-201ENST00000603246 681 ntBASIC5.84□□□□□ -1.47
ATG4DQ86TL0 AL445465.1-206ENST00000609544 528 ntTSL 5 BASIC5.84□□□□□ -1.47
ATG4DQ86TL0 AC024255.1-201ENST00000614376 102 ntBASIC5.84□□□□□ -1.47
ATG4DQ86TL0 AC089999.3-201ENST00000622440 577 ntBASIC5.84□□□□□ -1.47
ATG4DQ86TL0 AC021106.3-201ENST00000623925 531 ntBASIC5.84□□□□□ -1.47
ATG4DQ86TL0 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
ATG4DQ86TL0 NHS-202ENST00000398097 8213 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
ATG4DQ86TL0 OR6Y1-203ENST00000641622 5128 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
ATG4DQ86TL0 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
ATG4DQ86TL0 LGI1-219ENST00000636155 1618 ntTSL 5 BASIC5.84□□□□□ -1.47
ATG4DQ86TL0 MDGA2-201ENST00000357362 2965 ntTSL 5 BASIC5.84□□□□□ -1.48
ATG4DQ86TL0 ZBTB21-205ENST00000398511 5608 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
ATG4DQ86TL0 ZNF733P-202ENST00000444809 1573 ntBASIC5.84□□□□□ -1.48
ATG4DQ86TL0 LMO3-202ENST00000320122 3759 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
ATG4DQ86TL0 AAK1-203ENST00000409085 11345 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.48
ATG4DQ86TL0 LRRC7-203ENST00000370958 2375 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
ATG4DQ86TL0 ZNF426-202ENST00000535489 2375 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.48
ATG4DQ86TL0 USP46-201ENST00000441222 7954 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
ATG4DQ86TL0 UQCC1-208ENST00000397554 3638 ntTSL 2 BASIC5.84□□□□□ -1.48
ATG4DQ86TL0 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC5.83□□□□□ -1.48
ATG4DQ86TL0 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
ATG4DQ86TL0 AP004243.1-201ENST00000529108 1433 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
ATG4DQ86TL0 MAPK10-287ENST00000641217 3037 ntBASIC5.83□□□□□ -1.48
ATG4DQ86TL0 PTPRZ1-202ENST00000449182 4627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
ATG4DQ86TL0 CTAGE5-201ENST00000280082 2554 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
ATG4DQ86TL0 CLEC4E-201ENST00000299663 2159 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
ATG4DQ86TL0 PPBPP2-201ENST00000513150 1362 ntBASIC5.83□□□□□ -1.48
ATG4DQ86TL0 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
ATG4DQ86TL0 LINC01920-201ENST00000441356 2528 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
ATG4DQ86TL0 OSBPL9-203ENST00000428468 2893 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
ATG4DQ86TL0 PCDH15-213ENST00000395445 5917 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
ATG4DQ86TL0 DMD-211ENST00000378707 7410 ntTSL 5 BASIC5.83□□□□□ -1.48
ATG4DQ86TL0 PCYT1A-204ENST00000419333 1325 ntTSL 5 BASIC5.83□□□□□ -1.48
ATG4DQ86TL0 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
ATG4DQ86TL0 AC005674.2-201ENST00000561486 3510 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
ATG4DQ86TL0 NBPF12-205ENST00000617614 4630 ntTSL 5 BASIC5.83□□□□□ -1.48
ATG4DQ86TL0 Y_RNA.145-201ENST00000363527 102 ntBASIC5.83□□□□□ -1.48
ATG4DQ86TL0 RNU1-84P-201ENST00000365447 164 ntBASIC5.83□□□□□ -1.48
ATG4DQ86TL0 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC5.83□□□□□ -1.48
ATG4DQ86TL0 AP003170.5-201ENST00000397185 335 ntBASIC5.83□□□□□ -1.48
ATG4DQ86TL0 RPS24P12-201ENST00000402084 394 ntBASIC5.83□□□□□ -1.48
ATG4DQ86TL0 AL133260.1-201ENST00000405720 405 ntBASIC5.83□□□□□ -1.48
ATG4DQ86TL0 MIR548P-201ENST00000408336 84 ntBASIC5.83□□□□□ -1.48
ATG4DQ86TL0 RN7SKP281-201ENST00000410472 352 ntBASIC5.83□□□□□ -1.48
ATG4DQ86TL0 RPS3AP3-201ENST00000411933 242 ntBASIC5.83□□□□□ -1.48
ATG4DQ86TL0 B3GALNT1P1-201ENST00000420569 975 ntBASIC5.83□□□□□ -1.48
ATG4DQ86TL0 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC5.83□□□□□ -1.48
ATG4DQ86TL0 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
ATG4DQ86TL0 RPL34P27-201ENST00000428810 349 ntBASIC5.83□□□□□ -1.48
ATG4DQ86TL0 RPL32-206ENST00000435983 620 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
ATG4DQ86TL0 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC5.83□□□□□ -1.48
ATG4DQ86TL0 AL021937.4-201ENST00000444848 444 ntTSL 3 BASIC5.83□□□□□ -1.48
ATG4DQ86TL0 MRPL50P4-201ENST00000446432 475 ntBASIC5.83□□□□□ -1.48
ATG4DQ86TL0 AL445991.1-201ENST00000450381 475 ntBASIC5.83□□□□□ -1.48
ATG4DQ86TL0 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC5.83□□□□□ -1.48
ATG4DQ86TL0 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC5.83□□□□□ -1.48
ATG4DQ86TL0 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC5.83□□□□□ -1.48
ATG4DQ86TL0 AC114981.1-201ENST00000503897 678 ntBASIC5.83□□□□□ -1.48
ATG4DQ86TL0 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC5.83□□□□□ -1.48
ATG4DQ86TL0 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC5.83□□□□□ -1.48
ATG4DQ86TL0 AC106800.3-201ENST00000511389 308 ntBASIC5.83□□□□□ -1.48
ATG4DQ86TL0 AC079015.1-201ENST00000521793 596 ntTSL 2 BASIC5.83□□□□□ -1.48
ATG4DQ86TL0 AC239860.2-201ENST00000525886 270 ntBASIC5.83□□□□□ -1.48
ATG4DQ86TL0 AL133399.1-201ENST00000527476 298 ntBASIC5.83□□□□□ -1.48
ATG4DQ86TL0 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC5.83□□□□□ -1.48
ATG4DQ86TL0 AL512310.1-201ENST00000548639 172 ntBASIC5.83□□□□□ -1.48
ATG4DQ86TL0 RPL3P13-201ENST00000550415 216 ntBASIC5.83□□□□□ -1.48
ATG4DQ86TL0 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC5.83□□□□□ -1.48
ATG4DQ86TL0 AC018761.4-201ENST00000585742 272 ntTSL 3 BASIC5.83□□□□□ -1.48
ATG4DQ86TL0 RPL12P25-202ENST00000598100 674 ntBASIC5.83□□□□□ -1.48
ATG4DQ86TL0 AC011500.1-201ENST00000601963 469 ntBASIC5.83□□□□□ -1.48
ATG4DQ86TL0 uc_338.29-201ENST00000615099 168 ntBASIC5.83□□□□□ -1.48
ATG4DQ86TL0 AC243756.2-201ENST00000618406 463 ntBASIC5.83□□□□□ -1.48
ATG4DQ86TL0 AC134503.1-201ENST00000633048 54 ntBASIC5.83□□□□□ -1.48
ATG4DQ86TL0 LINC02495-203ENST00000636704 242 ntBASIC5.83□□□□□ -1.48
ATG4DQ86TL0 5S_rRNA.29-201ENST00000641250 107 ntBASIC5.83□□□□□ -1.48
ATG4DQ86TL0 ZC3H11A-202ENST00000367210 5877 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
ATG4DQ86TL0 GBP1-201ENST00000370473 3035 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
ATG4DQ86TL0 ZCCHC6-204ENST00000375957 2262 ntTSL 2 BASIC5.83□□□□□ -1.48
ATG4DQ86TL0 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
ATG4DQ86TL0 RABGAP1L-218ENST00000489615 6821 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
ATG4DQ86TL0 MARCH6-201ENST00000274140 9569 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 85.3 ms