Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 AL390334.1-201ENST00000556395 450 ntBASIC5.32□□□□□ -1.56
RNF220Q5VTB9 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC5.32□□□□□ -1.56
RNF220Q5VTB9 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC5.32□□□□□ -1.56
RNF220Q5VTB9 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC5.32□□□□□ -1.56
RNF220Q5VTB9 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC5.32□□□□□ -1.56
RNF220Q5VTB9 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC5.32□□□□□ -1.56
RNF220Q5VTB9 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC5.32□□□□□ -1.56
RNF220Q5VTB9 AL451074.6-201ENST00000608512 729 ntBASIC5.32□□□□□ -1.56
RNF220Q5VTB9 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
RNF220Q5VTB9 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC5.32□□□□□ -1.56
RNF220Q5VTB9 CU459211.1-201ENST00000635667 749 ntBASIC5.32□□□□□ -1.56
RNF220Q5VTB9 PHKBP1-201ENST00000450951 1951 ntBASIC5.32□□□□□ -1.56
RNF220Q5VTB9 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
RNF220Q5VTB9 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
RNF220Q5VTB9 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.32□□□□□ -1.56
RNF220Q5VTB9 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC5.32□□□□□ -1.56
RNF220Q5VTB9 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
RNF220Q5VTB9 AC091305.2-201ENST00000624049 1576 ntBASIC5.32□□□□□ -1.56
RNF220Q5VTB9 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
RNF220Q5VTB9 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
RNF220Q5VTB9 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
RNF220Q5VTB9 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
RNF220Q5VTB9 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
RNF220Q5VTB9 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC5.32□□□□□ -1.56
RNF220Q5VTB9 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
RNF220Q5VTB9 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
RNF220Q5VTB9 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
RNF220Q5VTB9 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC5.31□□□□□ -1.56
RNF220Q5VTB9 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.31□□□□□ -1.56
RNF220Q5VTB9 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
RNF220Q5VTB9 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC5.31□□□□□ -1.56
RNF220Q5VTB9 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.31□□□□□ -1.56
RNF220Q5VTB9 ODF3-202ENST00000342593 386 ntTSL 5 BASIC5.31□□□□□ -1.56
RNF220Q5VTB9 RNU6-582P-201ENST00000362989 107 ntBASIC5.31□□□□□ -1.56
RNF220Q5VTB9 ADPRM-201ENST00000379774 1209 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
RNF220Q5VTB9 SNORD116-23-201ENST00000384645 92 ntBASIC5.31□□□□□ -1.56
RNF220Q5VTB9 AL133264.1-201ENST00000407157 562 ntBASIC5.31□□□□□ -1.56
RNF220Q5VTB9 AL139098.1-201ENST00000407291 389 ntBASIC5.31□□□□□ -1.56
RNF220Q5VTB9 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC5.31□□□□□ -1.56
RNF220Q5VTB9 RN7SKP29-201ENST00000410957 272 ntBASIC5.31□□□□□ -1.56
RNF220Q5VTB9 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC5.31□□□□□ -1.56
RNF220Q5VTB9 AL354890.1-201ENST00000413730 346 ntBASIC5.31□□□□□ -1.56
RNF220Q5VTB9 PRELID3BP11-201ENST00000414230 479 ntBASIC5.31□□□□□ -1.56
RNF220Q5VTB9 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC5.31□□□□□ -1.56
RNF220Q5VTB9 RPL7P53-201ENST00000421245 739 ntBASIC5.31□□□□□ -1.56
RNF220Q5VTB9 ATP5F1P1-201ENST00000433775 569 ntBASIC5.31□□□□□ -1.56
RNF220Q5VTB9 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC5.31□□□□□ -1.56
RNF220Q5VTB9 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC5.31□□□□□ -1.56
RNF220Q5VTB9 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC5.31□□□□□ -1.56
RNF220Q5VTB9 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
RNF220Q5VTB9 OR6K5P-201ENST00000447050 945 ntBASIC5.31□□□□□ -1.56
RNF220Q5VTB9 EEF1B2P3-201ENST00000447718 678 ntBASIC5.31□□□□□ -1.56
RNF220Q5VTB9 RPL23AP15-201ENST00000450202 459 ntBASIC5.31□□□□□ -1.56
RNF220Q5VTB9 AC239809.1-201ENST00000450470 217 ntBASIC5.31□□□□□ -1.56
RNF220Q5VTB9 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC5.31□□□□□ -1.56
RNF220Q5VTB9 RPL21P134-201ENST00000453468 483 ntBASIC5.31□□□□□ -1.56
RNF220Q5VTB9 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC5.31□□□□□ -1.56
RNF220Q5VTB9 AC093166.4-201ENST00000457867 318 ntBASIC5.31□□□□□ -1.56
RNF220Q5VTB9 PPIAP21-201ENST00000464473 501 ntBASIC5.31□□□□□ -1.56
RNF220Q5VTB9 RPL21P71-201ENST00000465598 459 ntBASIC5.31□□□□□ -1.56
RNF220Q5VTB9 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC5.31□□□□□ -1.56
RNF220Q5VTB9 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC5.31□□□□□ -1.56
RNF220Q5VTB9 RN7SL193P-201ENST00000491708 276 ntBASIC5.31□□□□□ -1.56
RNF220Q5VTB9 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC5.31□□□□□ -1.56
RNF220Q5VTB9 AC122718.2-201ENST00000505325 591 ntBASIC5.31□□□□□ -1.56
RNF220Q5VTB9 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC5.31□□□□□ -1.56
RNF220Q5VTB9 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC5.31□□□□□ -1.56
RNF220Q5VTB9 RNU6-488P-201ENST00000515918 99 ntBASIC5.31□□□□□ -1.56
RNF220Q5VTB9 RNA5SP228-201ENST00000516232 133 ntBASIC5.31□□□□□ -1.56
RNF220Q5VTB9 RNU6-885P-201ENST00000516607 104 ntBASIC5.31□□□□□ -1.56
RNF220Q5VTB9 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC5.31□□□□□ -1.56
RNF220Q5VTB9 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC5.31□□□□□ -1.56
RNF220Q5VTB9 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
RNF220Q5VTB9 AP000926.4-201ENST00000527351 454 ntBASIC5.31□□□□□ -1.56
RNF220Q5VTB9 AP003461.1-201ENST00000528866 78 ntBASIC5.31□□□□□ -1.56
RNF220Q5VTB9 AC084121.1-201ENST00000533882 835 ntBASIC5.31□□□□□ -1.56
RNF220Q5VTB9 AC005832.3-201ENST00000537929 631 ntBASIC5.31□□□□□ -1.56
RNF220Q5VTB9 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC5.31□□□□□ -1.56
RNF220Q5VTB9 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
RNF220Q5VTB9 CYCSP38-201ENST00000559840 322 ntBASIC5.31□□□□□ -1.56
RNF220Q5VTB9 GTF2IP8-201ENST00000560687 584 ntBASIC5.31□□□□□ -1.56
RNF220Q5VTB9 AC018552.3-201ENST00000567416 561 ntBASIC5.31□□□□□ -1.56
RNF220Q5VTB9 AC110743.1-201ENST00000584870 478 ntBASIC5.31□□□□□ -1.56
RNF220Q5VTB9 IGLCOR22-2-201ENST00000605398 313 ntBASIC5.31□□□□□ -1.56
RNF220Q5VTB9 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC5.31□□□□□ -1.56
RNF220Q5VTB9 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC5.31□□□□□ -1.56
RNF220Q5VTB9 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC5.31□□□□□ -1.56
RNF220Q5VTB9 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC5.31□□□□□ -1.56
RNF220Q5VTB9 AC121761.2-201ENST00000617300 689 ntBASIC5.31□□□□□ -1.56
RNF220Q5VTB9 AL591926.1-201ENST00000620542 217 ntBASIC5.31□□□□□ -1.56
RNF220Q5VTB9 AC007490.1-201ENST00000624321 703 ntBASIC5.31□□□□□ -1.56
RNF220Q5VTB9 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC5.31□□□□□ -1.56
RNF220Q5VTB9 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC5.31□□□□□ -1.56
RNF220Q5VTB9 NEK3-211ENST00000629912 141 ntTSL 5 BASIC5.31□□□□□ -1.56
RNF220Q5VTB9 MIR4278-201ENST00000636094 69 ntBASIC5.31□□□□□ -1.56
RNF220Q5VTB9 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC5.31□□□□□ -1.56
RNF220Q5VTB9 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC5.31□□□□□ -1.56
RNF220Q5VTB9 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
RNF220Q5VTB9 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
RNF220Q5VTB9 AC107027.3-201ENST00000565095 3473 ntBASIC5.31□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 129.6 ms