Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 AP003497.2-201ENST00000624220 967 ntBASIC5.3□□□□□ -1.56
RFX7Q2KHR2 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC5.3□□□□□ -1.56
RFX7Q2KHR2 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
RFX7Q2KHR2 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
RFX7Q2KHR2 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
RFX7Q2KHR2 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
RFX7Q2KHR2 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
RFX7Q2KHR2 AP001273.1-201ENST00000624493 3152 ntBASIC5.3□□□□□ -1.56
RFX7Q2KHR2 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
RFX7Q2KHR2 AL031595.2-201ENST00000624215 19071 ntBASIC5.3□□□□□ -1.56
RFX7Q2KHR2 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
RFX7Q2KHR2 MIR23A-201ENST00000385245 73 ntBASIC5.29□□□□□ -1.56
RFX7Q2KHR2 ATP5F1P2-201ENST00000398143 760 ntBASIC5.29□□□□□ -1.56
RFX7Q2KHR2 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
RFX7Q2KHR2 AC009237.10-201ENST00000414112 510 ntBASIC5.29□□□□□ -1.56
RFX7Q2KHR2 FTLP19-201ENST00000433300 394 ntBASIC5.29□□□□□ -1.56
RFX7Q2KHR2 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC5.29□□□□□ -1.56
RFX7Q2KHR2 AC122718.1-201ENST00000439448 744 ntBASIC5.29□□□□□ -1.56
RFX7Q2KHR2 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC5.29□□□□□ -1.56
RFX7Q2KHR2 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC5.29□□□□□ -1.56
RFX7Q2KHR2 FAM133DP-201ENST00000464802 691 ntBASIC5.29□□□□□ -1.56
RFX7Q2KHR2 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC5.29□□□□□ -1.56
RFX7Q2KHR2 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC5.29□□□□□ -1.56
RFX7Q2KHR2 AC090515.3-201ENST00000560431 315 ntBASIC5.29□□□□□ -1.56
RFX7Q2KHR2 ARF4P1-201ENST00000605447 541 ntBASIC5.29□□□□□ -1.56
RFX7Q2KHR2 5S_rRNA.16-201ENST00000612928 119 ntBASIC5.29□□□□□ -1.56
RFX7Q2KHR2 AL392048.1-201ENST00000613946 534 ntBASIC5.29□□□□□ -1.56
RFX7Q2KHR2 MIR492-201ENST00000638676 116 ntBASIC5.29□□□□□ -1.56
RFX7Q2KHR2 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
RFX7Q2KHR2 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC5.29□□□□□ -1.56
RFX7Q2KHR2 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC5.29□□□□□ -1.56
RFX7Q2KHR2 AC017104.4-201ENST00000636283 1592 ntBASIC5.29□□□□□ -1.56
RFX7Q2KHR2 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
RFX7Q2KHR2 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
RFX7Q2KHR2 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC5.29□□□□□ -1.56
RFX7Q2KHR2 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
RFX7Q2KHR2 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC5.29□□□□□ -1.56
RFX7Q2KHR2 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
RFX7Q2KHR2 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
RFX7Q2KHR2 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
RFX7Q2KHR2 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
RFX7Q2KHR2 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC5.29□□□□□ -1.56
RFX7Q2KHR2 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
RFX7Q2KHR2 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
RFX7Q2KHR2 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
RFX7Q2KHR2 AC097374.1-203ENST00000400783 485 ntBASIC5.29□□□□□ -1.56
RFX7Q2KHR2 RN7SKP263-201ENST00000411194 309 ntBASIC5.29□□□□□ -1.56
RFX7Q2KHR2 OR8G2P-201ENST00000412796 908 ntBASIC5.29□□□□□ -1.56
RFX7Q2KHR2 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC5.29□□□□□ -1.56
RFX7Q2KHR2 PSMC1P13-201ENST00000458195 985 ntBASIC5.29□□□□□ -1.56
RFX7Q2KHR2 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
RFX7Q2KHR2 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC5.29□□□□□ -1.56
RFX7Q2KHR2 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC5.29□□□□□ -1.56
RFX7Q2KHR2 AC026979.4-201ENST00000606555 645 ntBASIC5.29□□□□□ -1.56
RFX7Q2KHR2 uc_338.13-201ENST00000618243 179 ntBASIC5.29□□□□□ -1.56
RFX7Q2KHR2 FP325313.1-201ENST00000638228 703 ntBASIC5.29□□□□□ -1.56
RFX7Q2KHR2 AL139254.3-201ENST00000641097 674 ntBASIC5.29□□□□□ -1.56
RFX7Q2KHR2 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC5.28□□□□□ -1.56
RFX7Q2KHR2 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC5.28□□□□□ -1.56
RFX7Q2KHR2 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
RFX7Q2KHR2 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
RFX7Q2KHR2 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC5.28□□□□□ -1.56
RFX7Q2KHR2 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
RFX7Q2KHR2 AL121657.1-201ENST00000327215 531 ntBASIC5.28□□□□□ -1.56
RFX7Q2KHR2 MIR331-201ENST00000362302 94 ntBASIC5.28□□□□□ -1.56
RFX7Q2KHR2 AL161909.1-201ENST00000397390 712 ntBASIC5.28□□□□□ -1.56
RFX7Q2KHR2 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC5.28□□□□□ -1.56
RFX7Q2KHR2 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
RFX7Q2KHR2 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC5.28□□□□□ -1.56
RFX7Q2KHR2 BTF3P10-201ENST00000433415 495 ntBASIC5.28□□□□□ -1.56
RFX7Q2KHR2 NUTF2P3-201ENST00000448540 384 ntBASIC5.28□□□□□ -1.56
RFX7Q2KHR2 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC5.28□□□□□ -1.56
RFX7Q2KHR2 ABCF2P2-201ENST00000450549 296 ntBASIC5.28□□□□□ -1.56
RFX7Q2KHR2 MTCO1P35-201ENST00000515270 228 ntBASIC5.28□□□□□ -1.56
RFX7Q2KHR2 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC5.28□□□□□ -1.56
RFX7Q2KHR2 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC5.28□□□□□ -1.56
RFX7Q2KHR2 AC107993.1-201ENST00000591343 684 ntBASIC5.28□□□□□ -1.56
RFX7Q2KHR2 ZYXP1-201ENST00000617638 118 ntBASIC5.28□□□□□ -1.56
RFX7Q2KHR2 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
RFX7Q2KHR2 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC5.27□□□□□ -1.57
RFX7Q2KHR2 BCLAF1P2-201ENST00000624956 2609 ntBASIC5.27□□□□□ -1.57
RFX7Q2KHR2 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
RFX7Q2KHR2 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
RFX7Q2KHR2 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.27□□□□□ -1.57
RFX7Q2KHR2 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
RFX7Q2KHR2 FTO-203ENST00000460382 1517 ntTSL 5 BASIC5.27□□□□□ -1.57
RFX7Q2KHR2 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
RFX7Q2KHR2 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC5.27□□□□□ -1.57
RFX7Q2KHR2 CA1-225ENST00000626824 2405 ntTSL 5 BASIC5.27□□□□□ -1.57
RFX7Q2KHR2 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC5.27□□□□□ -1.57
RFX7Q2KHR2 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
RFX7Q2KHR2 MIR383-201ENST00000362257 73 ntBASIC5.27□□□□□ -1.57
RFX7Q2KHR2 SNORA11F-201ENST00000408237 128 ntBASIC5.27□□□□□ -1.57
RFX7Q2KHR2 RNU6ATAC34P-201ENST00000408879 121 ntBASIC5.27□□□□□ -1.57
RFX7Q2KHR2 MIR1911-201ENST00000410783 80 ntBASIC5.27□□□□□ -1.57
RFX7Q2KHR2 RPS20P14-201ENST00000412545 360 ntBASIC5.27□□□□□ -1.57
RFX7Q2KHR2 SNRPFP1-201ENST00000414761 252 ntBASIC5.27□□□□□ -1.57
RFX7Q2KHR2 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC5.27□□□□□ -1.57
RFX7Q2KHR2 RC3H1-IT1-201ENST00000421851 448 ntTSL 5 BASIC5.27□□□□□ -1.57
RFX7Q2KHR2 HSPE1P16-201ENST00000426640 348 ntBASIC5.27□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 78.2 ms