Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC3.49□□□□□ -1.85
HIST1H1AQ02539 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
HIST1H1AQ02539 RPL23AP25-201ENST00000430973 463 ntBASIC3.49□□□□□ -1.85
HIST1H1AQ02539 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC3.49□□□□□ -1.85
HIST1H1AQ02539 FHP1-201ENST00000442741 703 ntBASIC3.49□□□□□ -1.85
HIST1H1AQ02539 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC3.49□□□□□ -1.85
HIST1H1AQ02539 AL356390.1-201ENST00000455684 397 ntBASIC3.49□□□□□ -1.85
HIST1H1AQ02539 AL133477.1-201ENST00000457472 514 ntBASIC3.49□□□□□ -1.85
HIST1H1AQ02539 RN7SL205P-201ENST00000490174 284 ntBASIC3.49□□□□□ -1.85
HIST1H1AQ02539 AC106872.2-201ENST00000494303 480 ntBASIC3.49□□□□□ -1.85
HIST1H1AQ02539 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC3.49□□□□□ -1.85
HIST1H1AQ02539 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC3.49□□□□□ -1.85
HIST1H1AQ02539 RNU2-30P-201ENST00000516209 141 ntBASIC3.49□□□□□ -1.85
HIST1H1AQ02539 IGHV3-63-201ENST00000518422 341 ntBASIC3.49□□□□□ -1.85
HIST1H1AQ02539 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
HIST1H1AQ02539 IGLV3-26-201ENST00000520756 302 ntBASIC3.49□□□□□ -1.85
HIST1H1AQ02539 AC090151.1-201ENST00000520784 730 ntBASIC3.49□□□□□ -1.85
HIST1H1AQ02539 IFITM8P-201ENST00000522529 394 ntBASIC3.49□□□□□ -1.85
HIST1H1AQ02539 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC3.49□□□□□ -1.85
HIST1H1AQ02539 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC3.49□□□□□ -1.85
HIST1H1AQ02539 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC3.49□□□□□ -1.85
HIST1H1AQ02539 AC021006.3-201ENST00000530771 192 ntBASIC3.49□□□□□ -1.85
HIST1H1AQ02539 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC3.49□□□□□ -1.85
HIST1H1AQ02539 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC3.49□□□□□ -1.85
HIST1H1AQ02539 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC3.49□□□□□ -1.85
HIST1H1AQ02539 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC3.49□□□□□ -1.85
HIST1H1AQ02539 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
HIST1H1AQ02539 AL512624.1-201ENST00000613638 469 ntBASIC3.49□□□□□ -1.85
HIST1H1AQ02539 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC3.49□□□□□ -1.85
HIST1H1AQ02539 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC3.49□□□□□ -1.85
HIST1H1AQ02539 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC3.49□□□□□ -1.85
HIST1H1AQ02539 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
HIST1H1AQ02539 CASC8-203ENST00000502082 1420 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
HIST1H1AQ02539 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
HIST1H1AQ02539 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC3.49□□□□□ -1.85
HIST1H1AQ02539 AL031119.1-201ENST00000404707 1879 ntBASIC3.49□□□□□ -1.85
HIST1H1AQ02539 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
HIST1H1AQ02539 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.49□□□□□ -1.85
HIST1H1AQ02539 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC3.49□□□□□ -1.85
HIST1H1AQ02539 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.49□□□□□ -1.85
HIST1H1AQ02539 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
HIST1H1AQ02539 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC3.49□□□□□ -1.85
HIST1H1AQ02539 AC106871.1-201ENST00000568324 3102 ntBASIC3.48□□□□□ -1.85
HIST1H1AQ02539 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC3.48□□□□□ -1.85
HIST1H1AQ02539 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC3.48□□□□□ -1.85
HIST1H1AQ02539 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC3.48□□□□□ -1.85
HIST1H1AQ02539 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
HIST1H1AQ02539 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC3.48□□□□□ -1.85
HIST1H1AQ02539 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
HIST1H1AQ02539 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.48□□□□□ -1.85
HIST1H1AQ02539 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC3.48□□□□□ -1.85
HIST1H1AQ02539 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.48□□□□□ -1.85
HIST1H1AQ02539 RARSP1-201ENST00000542842 1418 ntBASIC3.48□□□□□ -1.85
HIST1H1AQ02539 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
HIST1H1AQ02539 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC3.48□□□□□ -1.85
HIST1H1AQ02539 RNA5SP239-201ENST00000410218 129 ntBASIC3.48□□□□□ -1.85
HIST1H1AQ02539 RN7SKP267-201ENST00000410381 285 ntBASIC3.48□□□□□ -1.85
HIST1H1AQ02539 GLUD1P9-201ENST00000420997 1173 ntBASIC3.48□□□□□ -1.85
HIST1H1AQ02539 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC3.48□□□□□ -1.85
HIST1H1AQ02539 AL138787.1-202ENST00000437804 898 ntBASIC3.48□□□□□ -1.85
HIST1H1AQ02539 AC239809.1-201ENST00000450470 217 ntBASIC3.48□□□□□ -1.85
HIST1H1AQ02539 C2orf80-207ENST00000453017 722 ntTSL 3 BASIC3.48□□□□□ -1.85
HIST1H1AQ02539 EIF2S2P4-201ENST00000461070 984 ntBASIC3.48□□□□□ -1.85
HIST1H1AQ02539 AC112496.1-201ENST00000497961 562 ntTSL 5 BASIC3.48□□□□□ -1.85
HIST1H1AQ02539 TRIM36-IT1-201ENST00000503723 881 ntBASIC3.48□□□□□ -1.85
HIST1H1AQ02539 AK4P6-201ENST00000505168 528 ntBASIC3.48□□□□□ -1.85
HIST1H1AQ02539 AC093763.2-201ENST00000505334 1223 ntBASIC3.48□□□□□ -1.85
HIST1H1AQ02539 AC010451.2-201ENST00000511514 545 ntTSL 4 BASIC3.48□□□□□ -1.85
HIST1H1AQ02539 RNU6ATAC24P-201ENST00000516811 135 ntBASIC3.48□□□□□ -1.85
HIST1H1AQ02539 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC3.48□□□□□ -1.85
HIST1H1AQ02539 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC3.48□□□□□ -1.85
HIST1H1AQ02539 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC3.48□□□□□ -1.85
HIST1H1AQ02539 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC3.48□□□□□ -1.85
HIST1H1AQ02539 AP006289.1-201ENST00000538089 277 ntBASIC3.48□□□□□ -1.85
HIST1H1AQ02539 AP001880.2-201ENST00000538233 448 ntBASIC3.48□□□□□ -1.85
HIST1H1AQ02539 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC3.48□□□□□ -1.85
HIST1H1AQ02539 AC084757.1-201ENST00000559987 490 ntBASIC3.48□□□□□ -1.85
HIST1H1AQ02539 AC005692.2-201ENST00000566521 596 ntTSL 3 BASIC3.48□□□□□ -1.85
HIST1H1AQ02539 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC3.48□□□□□ -1.85
HIST1H1AQ02539 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC3.48□□□□□ -1.85
HIST1H1AQ02539 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC3.48□□□□□ -1.85
HIST1H1AQ02539 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
HIST1H1AQ02539 AC011453.2-201ENST00000603737 729 ntBASIC3.48□□□□□ -1.85
HIST1H1AQ02539 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC3.48□□□□□ -1.85
HIST1H1AQ02539 SDR42E1P1-201ENST00000611327 477 ntBASIC3.48□□□□□ -1.85
HIST1H1AQ02539 AL359715.5-201ENST00000623431 443 ntBASIC3.48□□□□□ -1.85
HIST1H1AQ02539 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC3.48□□□□□ -1.85
HIST1H1AQ02539 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC3.48□□□□□ -1.85
HIST1H1AQ02539 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC3.48□□□□□ -1.85
HIST1H1AQ02539 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC3.48□□□□□ -1.85
HIST1H1AQ02539 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
HIST1H1AQ02539 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
HIST1H1AQ02539 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
HIST1H1AQ02539 AC016588.2-201ENST00000632484 3021 ntBASIC3.48□□□□□ -1.85
HIST1H1AQ02539 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC3.48□□□□□ -1.85
HIST1H1AQ02539 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
HIST1H1AQ02539 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
HIST1H1AQ02539 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
HIST1H1AQ02539 AC095050.2-201ENST00000510748 1458 ntBASIC3.47□□□□□ -1.85
HIST1H1AQ02539 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC3.47□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 92 ms