Protein–RNA interactions for Protein: Q00526

CDK3, Cyclin-dependent kinase 3, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3Q00526 RPS4XP12-201ENST00000461747 709 ntBASIC4.77□□□□□ -1.65
CDK3Q00526 AC008379.1-201ENST00000463655 464 ntBASIC4.77□□□□□ -1.65
CDK3Q00526 SCARNA22-201ENST00000503991 125 ntBASIC4.77□□□□□ -1.65
CDK3Q00526 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC4.77□□□□□ -1.65
CDK3Q00526 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC4.77□□□□□ -1.65
CDK3Q00526 AP003355.1-201ENST00000518956 587 ntBASIC4.77□□□□□ -1.65
CDK3Q00526 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC4.77□□□□□ -1.65
CDK3Q00526 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC4.77□□□□□ -1.65
CDK3Q00526 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC4.77□□□□□ -1.65
CDK3Q00526 AC137768.1-201ENST00000549998 553 ntBASIC4.77□□□□□ -1.65
CDK3Q00526 AC122134.1-202ENST00000569111 1201 ntBASIC4.77□□□□□ -1.65
CDK3Q00526 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CDK3Q00526 RN7SL802P-201ENST00000577858 299 ntBASIC4.77□□□□□ -1.65
CDK3Q00526 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC4.77□□□□□ -1.65
CDK3Q00526 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC4.77□□□□□ -1.65
CDK3Q00526 AC006116.7-201ENST00000590141 756 ntBASIC4.77□□□□□ -1.65
CDK3Q00526 AC079610.2-201ENST00000604818 690 ntBASIC4.77□□□□□ -1.65
CDK3Q00526 AC245100.7-201ENST00000609678 442 ntBASIC4.77□□□□□ -1.65
CDK3Q00526 AL136295.6-201ENST00000610486 658 ntBASIC4.77□□□□□ -1.65
CDK3Q00526 MIR6820-201ENST00000611508 62 ntBASIC4.77□□□□□ -1.65
CDK3Q00526 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC4.77□□□□□ -1.65
CDK3Q00526 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CDK3Q00526 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC4.77□□□□□ -1.65
CDK3Q00526 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
CDK3Q00526 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
CDK3Q00526 PHACTR2P1-201ENST00000605639 1414 ntBASIC4.77□□□□□ -1.65
CDK3Q00526 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC4.77□□□□□ -1.65
CDK3Q00526 SMG1P6-201ENST00000532337 2930 ntBASIC4.77□□□□□ -1.65
CDK3Q00526 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC4.77□□□□□ -1.65
CDK3Q00526 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
CDK3Q00526 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CDK3Q00526 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CDK3Q00526 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CDK3Q00526 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC4.76□□□□□ -1.65
CDK3Q00526 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
CDK3Q00526 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CDK3Q00526 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC4.76□□□□□ -1.65
CDK3Q00526 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
CDK3Q00526 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CDK3Q00526 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.76□□□□□ -1.65
CDK3Q00526 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
CDK3Q00526 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC4.76□□□□□ -1.65
CDK3Q00526 RNU6-225P-201ENST00000384613 103 ntBASIC4.76□□□□□ -1.65
CDK3Q00526 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CDK3Q00526 GNG5P5-201ENST00000420444 220 ntBASIC4.76□□□□□ -1.65
CDK3Q00526 AC023128.2-201ENST00000420880 1223 ntBASIC4.76□□□□□ -1.65
CDK3Q00526 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC4.76□□□□□ -1.65
CDK3Q00526 FABP7P2-201ENST00000429946 379 ntBASIC4.76□□□□□ -1.65
CDK3Q00526 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC4.76□□□□□ -1.65
CDK3Q00526 RPS17P8-201ENST00000434525 335 ntBASIC4.76□□□□□ -1.65
CDK3Q00526 AC005154.2-201ENST00000438110 379 ntBASIC4.76□□□□□ -1.65
CDK3Q00526 RPL36AP15-201ENST00000444514 266 ntBASIC4.76□□□□□ -1.65
CDK3Q00526 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC4.76□□□□□ -1.65
CDK3Q00526 EIF4A2P4-201ENST00000458691 1196 ntBASIC4.76□□□□□ -1.65
CDK3Q00526 RPL21P47-201ENST00000483696 477 ntBASIC4.76□□□□□ -1.65
CDK3Q00526 AC104971.1-201ENST00000495117 578 ntBASIC4.76□□□□□ -1.65
CDK3Q00526 RPS27AP18-201ENST00000515536 459 ntBASIC4.76□□□□□ -1.65
CDK3Q00526 RNU5A-7P-201ENST00000515979 116 ntBASIC4.76□□□□□ -1.65
CDK3Q00526 RNU6-709P-201ENST00000517257 104 ntBASIC4.76□□□□□ -1.65
CDK3Q00526 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC4.76□□□□□ -1.65
CDK3Q00526 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CDK3Q00526 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC4.76□□□□□ -1.65
CDK3Q00526 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CDK3Q00526 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC4.76□□□□□ -1.65
CDK3Q00526 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC4.76□□□□□ -1.65
CDK3Q00526 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC4.76□□□□□ -1.65
CDK3Q00526 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC4.76□□□□□ -1.65
CDK3Q00526 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC4.76□□□□□ -1.65
CDK3Q00526 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC4.76□□□□□ -1.65
CDK3Q00526 NPM1P47-201ENST00000560843 856 ntBASIC4.76□□□□□ -1.65
CDK3Q00526 AC106734.1-201ENST00000568646 663 ntBASIC4.76□□□□□ -1.65
CDK3Q00526 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC4.76□□□□□ -1.65
CDK3Q00526 MIR5699-201ENST00000578903 90 ntBASIC4.76□□□□□ -1.65
CDK3Q00526 MIR548Y-201ENST00000582739 110 ntBASIC4.76□□□□□ -1.65
CDK3Q00526 MIR4660-201ENST00000583549 74 ntBASIC4.76□□□□□ -1.65
CDK3Q00526 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC4.76□□□□□ -1.65
CDK3Q00526 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC4.76□□□□□ -1.65
CDK3Q00526 AC133794.1-201ENST00000602731 914 ntBASIC4.76□□□□□ -1.65
CDK3Q00526 AC104785.1-201ENST00000603220 588 ntBASIC4.76□□□□□ -1.65
CDK3Q00526 AL139022.2-201ENST00000606934 443 ntBASIC4.76□□□□□ -1.65
CDK3Q00526 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CDK3Q00526 MIR6853-201ENST00000619642 74 ntBASIC4.76□□□□□ -1.65
CDK3Q00526 AC010872.1-201ENST00000624225 675 ntBASIC4.76□□□□□ -1.65
CDK3Q00526 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC4.76□□□□□ -1.65
CDK3Q00526 TLK1P1-201ENST00000456760 2440 ntBASIC4.76□□□□□ -1.65
CDK3Q00526 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC4.76□□□□□ -1.65
CDK3Q00526 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CDK3Q00526 AC097461.1-201ENST00000568928 2821 ntBASIC4.76□□□□□ -1.65
CDK3Q00526 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CDK3Q00526 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC4.76□□□□□ -1.65
CDK3Q00526 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CDK3Q00526 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC4.75□□□□□ -1.65
CDK3Q00526 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC4.75□□□□□ -1.65
CDK3Q00526 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CDK3Q00526 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CDK3Q00526 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
CDK3Q00526 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC4.75□□□□□ -1.65
CDK3Q00526 RNU2-50P-201ENST00000410494 143 ntBASIC4.75□□□□□ -1.65
CDK3Q00526 AC008173.1-201ENST00000418901 264 ntBASIC4.75□□□□□ -1.65
CDK3Q00526 SLC9B1P4-201ENST00000421957 1288 ntBASIC4.75□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 105.9 ms