Protein–RNA interactions for Protein: P83916

CBX1, Chromobox protein homolog 1, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P83916 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
CBX1P83916 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
CBX1P83916 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CBX1P83916 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
CBX1P83916 AC007342.9-201ENST00000623877 1385 ntBASIC4.65□□□□□ -1.66
CBX1P83916 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC4.65□□□□□ -1.66
CBX1P83916 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
CBX1P83916 MARK2P15-201ENST00000432204 2186 ntBASIC4.65□□□□□ -1.66
CBX1P83916 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
CBX1P83916 AC011493.1-201ENST00000596753 1632 ntBASIC4.65□□□□□ -1.66
CBX1P83916 EED-206ENST00000527888 1422 ntTSL 2 BASIC4.65□□□□□ -1.66
CBX1P83916 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
CBX1P83916 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
CBX1P83916 OR13C1P-202ENST00000641378 2919 ntBASIC4.65□□□□□ -1.66
CBX1P83916 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC4.65□□□□□ -1.66
CBX1P83916 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.67
CBX1P83916 RNA5SP234-201ENST00000363916 119 ntBASIC4.65□□□□□ -1.67
CBX1P83916 RNU1-149P-201ENST00000390870 161 ntBASIC4.65□□□□□ -1.67
CBX1P83916 SNORA3C-201ENST00000408792 125 ntBASIC4.65□□□□□ -1.67
CBX1P83916 AC108075.1-201ENST00000424692 529 ntBASIC4.65□□□□□ -1.67
CBX1P83916 AL512641.1-201ENST00000427232 548 ntTSL 3 BASIC4.65□□□□□ -1.67
CBX1P83916 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC4.65□□□□□ -1.67
CBX1P83916 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.65□□□□□ -1.67
CBX1P83916 EEF1A1P1-201ENST00000447052 739 ntBASIC4.65□□□□□ -1.67
CBX1P83916 RPL31P15-201ENST00000449770 338 ntBASIC4.65□□□□□ -1.67
CBX1P83916 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC4.65□□□□□ -1.67
CBX1P83916 RPL5P13-201ENST00000462840 709 ntBASIC4.65□□□□□ -1.67
CBX1P83916 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC4.65□□□□□ -1.67
CBX1P83916 MGST2-204ENST00000506797 634 ntTSL 2 BASIC4.65□□□□□ -1.67
CBX1P83916 PGAM1P13-201ENST00000507497 754 ntBASIC4.65□□□□□ -1.67
CBX1P83916 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC4.65□□□□□ -1.67
CBX1P83916 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC4.65□□□□□ -1.67
CBX1P83916 OR4V1P-201ENST00000525394 1140 ntBASIC4.65□□□□□ -1.67
CBX1P83916 OR11J2P-201ENST00000555298 907 ntBASIC4.65□□□□□ -1.67
CBX1P83916 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC4.65□□□□□ -1.67
CBX1P83916 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC4.65□□□□□ -1.67
CBX1P83916 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC4.65□□□□□ -1.67
CBX1P83916 AL121932.1-201ENST00000605542 214 ntBASIC4.65□□□□□ -1.67
CBX1P83916 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC4.65□□□□□ -1.67
CBX1P83916 BNIP3P7-201ENST00000605641 516 ntBASIC4.65□□□□□ -1.67
CBX1P83916 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.67
CBX1P83916 AC019080.5-201ENST00000624891 757 ntBASIC4.65□□□□□ -1.67
CBX1P83916 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
CBX1P83916 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
CBX1P83916 ARHGAP42P1-201ENST00000507474 1976 ntBASIC4.65□□□□□ -1.67
CBX1P83916 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC4.65□□□□□ -1.67
CBX1P83916 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC4.65□□□□□ -1.67
CBX1P83916 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
CBX1P83916 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
CBX1P83916 BX005019.1-201ENST00000561881 1810 ntBASIC4.65□□□□□ -1.67
CBX1P83916 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
CBX1P83916 AC134882.1-201ENST00000603738 1676 ntBASIC4.64□□□□□ -1.67
CBX1P83916 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
CBX1P83916 SMG1P6-201ENST00000532337 2930 ntBASIC4.64□□□□□ -1.67
CBX1P83916 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.64□□□□□ -1.67
CBX1P83916 C1orf185-201ENST00000371759 915 ntAPPRIS P2 TSL 2 BASIC4.64□□□□□ -1.67
CBX1P83916 PARD3-204ENST00000374768 799 ntTSL 3 BASIC4.64□□□□□ -1.67
CBX1P83916 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
CBX1P83916 ZNF736P10Y-201ENST00000403990 1110 ntBASIC4.64□□□□□ -1.67
CBX1P83916 RNU2-50P-201ENST00000410494 143 ntBASIC4.64□□□□□ -1.67
CBX1P83916 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC4.64□□□□□ -1.67
CBX1P83916 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC4.64□□□□□ -1.67
CBX1P83916 AL590609.2-201ENST00000421430 368 ntBASIC4.64□□□□□ -1.67
CBX1P83916 RPS6P12-201ENST00000432491 726 ntBASIC4.64□□□□□ -1.67
CBX1P83916 AC097523.2-201ENST00000435551 652 ntBASIC4.64□□□□□ -1.67
CBX1P83916 SUMO2P3-201ENST00000438311 288 ntBASIC4.64□□□□□ -1.67
CBX1P83916 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC4.64□□□□□ -1.67
CBX1P83916 XKRYP6-201ENST00000440468 1116 ntBASIC4.64□□□□□ -1.67
CBX1P83916 XKRYP3-201ENST00000442113 1116 ntBASIC4.64□□□□□ -1.67
CBX1P83916 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC4.64□□□□□ -1.67
CBX1P83916 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC4.64□□□□□ -1.67
CBX1P83916 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC4.64□□□□□ -1.67
CBX1P83916 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC4.64□□□□□ -1.67
CBX1P83916 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC4.64□□□□□ -1.67
CBX1P83916 SSX6-203ENST00000509958 336 ntTSL 3 BASIC4.64□□□□□ -1.67
CBX1P83916 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
CBX1P83916 AC027544.3-201ENST00000535082 757 ntBASIC4.64□□□□□ -1.67
CBX1P83916 LINC02406-201ENST00000553029 546 ntTSL 3 BASIC4.64□□□□□ -1.67
CBX1P83916 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.64□□□□□ -1.67
CBX1P83916 AC092868.3-201ENST00000560515 784 ntBASIC4.64□□□□□ -1.67
CBX1P83916 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC4.64□□□□□ -1.67
CBX1P83916 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC4.64□□□□□ -1.67
CBX1P83916 AC100767.2-201ENST00000604840 693 ntBASIC4.64□□□□□ -1.67
CBX1P83916 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC4.64□□□□□ -1.67
CBX1P83916 AC015982.1-201ENST00000608113 465 ntBASIC4.64□□□□□ -1.67
CBX1P83916 AC008785.1-201ENST00000624475 456 ntBASIC4.64□□□□□ -1.67
CBX1P83916 LDHA-225ENST00000625635 141 ntTSL 5 BASIC4.64□□□□□ -1.67
CBX1P83916 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC4.64□□□□□ -1.67
CBX1P83916 METTL15-211ENST00000634762 718 ntTSL 5 BASIC4.64□□□□□ -1.67
CBX1P83916 RPS4XP5-202ENST00000449995 1334 ntBASIC4.64□□□□□ -1.67
CBX1P83916 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
CBX1P83916 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CBX1P83916 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.64□□□□□ -1.67
CBX1P83916 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
CBX1P83916 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
CBX1P83916 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
CBX1P83916 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC4.63□□□□□ -1.67
CBX1P83916 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
CBX1P83916 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
CBX1P83916 TMSB4XP4-201ENST00000323496 618 ntBASIC4.63□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 108.6 ms