Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 SNORA31.13-201ENST00000516624 135 ntBASIC4.55□□□□□ -1.68
CDH11P55287 HIGD1AP18-201ENST00000520730 278 ntBASIC4.55□□□□□ -1.68
CDH11P55287 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC4.55□□□□□ -1.68
CDH11P55287 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CDH11P55287 CASP1-216ENST00000534497 825 ntTSL 5 BASIC4.55□□□□□ -1.68
CDH11P55287 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CDH11P55287 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
CDH11P55287 AL049870.4-201ENST00000555741 486 ntBASIC4.55□□□□□ -1.68
CDH11P55287 CYCSP40-201ENST00000575927 294 ntBASIC4.55□□□□□ -1.68
CDH11P55287 MIR4646-201ENST00000580775 63 ntBASIC4.55□□□□□ -1.68
CDH11P55287 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CDH11P55287 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC4.55□□□□□ -1.68
CDH11P55287 AC011492.1-201ENST00000600023 315 ntBASIC4.55□□□□□ -1.68
CDH11P55287 RPAP2P1-201ENST00000603626 1168 ntBASIC4.55□□□□□ -1.68
CDH11P55287 AC024940.4-201ENST00000605507 246 ntBASIC4.55□□□□□ -1.68
CDH11P55287 AC011374.2-201ENST00000607135 526 ntBASIC4.55□□□□□ -1.68
CDH11P55287 AC034229.4-201ENST00000607861 441 ntBASIC4.55□□□□□ -1.68
CDH11P55287 AL135786.2-201ENST00000608422 615 ntBASIC4.55□□□□□ -1.68
CDH11P55287 AC112503.1-201ENST00000608436 391 ntBASIC4.55□□□□□ -1.68
CDH11P55287 AL050303.3-201ENST00000613704 284 ntBASIC4.55□□□□□ -1.68
CDH11P55287 AC091046.2-201ENST00000620775 665 ntBASIC4.55□□□□□ -1.68
CDH11P55287 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC4.55□□□□□ -1.68
CDH11P55287 AC099494.2-201ENST00000623371 978 ntBASIC4.55□□□□□ -1.68
CDH11P55287 AC073342.3-201ENST00000624211 193 ntBASIC4.55□□□□□ -1.68
CDH11P55287 AC126544.2-201ENST00000625174 749 ntBASIC4.55□□□□□ -1.68
CDH11P55287 TEX41-254ENST00000626394 423 ntTSL 5 BASIC4.55□□□□□ -1.68
CDH11P55287 AC139713.2-215ENST00000641428 5037 ntBASIC4.55□□□□□ -1.68
CDH11P55287 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
CDH11P55287 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CDH11P55287 AC120338.1-201ENST00000625074 1541 ntBASIC4.55□□□□□ -1.68
CDH11P55287 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CDH11P55287 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
CDH11P55287 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
CDH11P55287 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
CDH11P55287 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
CDH11P55287 USP8-204ENST00000425032 3559 ntTSL 2 BASIC4.54□□□□□ -1.68
CDH11P55287 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC4.54□□□□□ -1.68
CDH11P55287 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
CDH11P55287 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
CDH11P55287 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.54□□□□□ -1.68
CDH11P55287 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC4.54□□□□□ -1.68
CDH11P55287 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
CDH11P55287 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
CDH11P55287 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
CDH11P55287 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
CDH11P55287 AC104297.1-201ENST00000393779 870 ntBASIC4.54□□□□□ -1.68
CDH11P55287 AL133270.1-201ENST00000402635 279 ntBASIC4.54□□□□□ -1.68
CDH11P55287 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC4.54□□□□□ -1.68
CDH11P55287 EIF4A1P1-201ENST00000420241 934 ntBASIC4.54□□□□□ -1.68
CDH11P55287 AC023128.2-201ENST00000420880 1223 ntBASIC4.54□□□□□ -1.68
CDH11P55287 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.54□□□□□ -1.68
CDH11P55287 MTCYBP32-201ENST00000427945 1084 ntBASIC4.54□□□□□ -1.68
CDH11P55287 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC4.54□□□□□ -1.68
CDH11P55287 TXNP5-201ENST00000441043 315 ntBASIC4.54□□□□□ -1.68
CDH11P55287 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC4.54□□□□□ -1.68
CDH11P55287 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
CDH11P55287 CYCSP42-201ENST00000450823 238 ntBASIC4.54□□□□□ -1.68
CDH11P55287 RPL7P61-201ENST00000451721 751 ntBASIC4.54□□□□□ -1.68
CDH11P55287 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC4.54□□□□□ -1.68
CDH11P55287 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC4.54□□□□□ -1.68
CDH11P55287 AC104982.1-201ENST00000478775 574 ntBASIC4.54□□□□□ -1.68
CDH11P55287 AC090686.1-201ENST00000481577 749 ntBASIC4.54□□□□□ -1.68
CDH11P55287 HMGB1P38-201ENST00000490557 577 ntBASIC4.54□□□□□ -1.68
CDH11P55287 TRAV31-201ENST00000502780 342 ntBASIC4.54□□□□□ -1.68
CDH11P55287 HMGB1P19-201ENST00000517578 577 ntBASIC4.54□□□□□ -1.68
CDH11P55287 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC4.54□□□□□ -1.68
CDH11P55287 BUD31P1-201ENST00000521828 359 ntBASIC4.54□□□□□ -1.68
CDH11P55287 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC4.54□□□□□ -1.68
CDH11P55287 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
CDH11P55287 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
CDH11P55287 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
CDH11P55287 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC4.54□□□□□ -1.68
CDH11P55287 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC4.54□□□□□ -1.68
CDH11P55287 AP005432.2-201ENST00000608162 586 ntBASIC4.54□□□□□ -1.68
CDH11P55287 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC4.54□□□□□ -1.68
CDH11P55287 AP004607.9-201ENST00000618202 316 ntBASIC4.54□□□□□ -1.68
CDH11P55287 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC4.54□□□□□ -1.68
CDH11P55287 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC4.54□□□□□ -1.68
CDH11P55287 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC4.54□□□□□ -1.68
CDH11P55287 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
CDH11P55287 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
CDH11P55287 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
CDH11P55287 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.54□□□□□ -1.68
CDH11P55287 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
CDH11P55287 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC4.54□□□□□ -1.68
CDH11P55287 HSPD1P14-201ENST00000432666 1618 ntBASIC4.54□□□□□ -1.68
CDH11P55287 AC017007.4-201ENST00000503353 1352 ntBASIC4.53□□□□□ -1.68
CDH11P55287 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CDH11P55287 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC4.53□□□□□ -1.68
CDH11P55287 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC4.53□□□□□ -1.68
CDH11P55287 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC4.53□□□□□ -1.68
CDH11P55287 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC4.53□□□□□ -1.68
CDH11P55287 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CDH11P55287 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
CDH11P55287 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC4.53□□□□□ -1.68
CDH11P55287 RNU4-4P-201ENST00000364588 130 ntBASIC4.53□□□□□ -1.68
CDH11P55287 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC4.53□□□□□ -1.68
CDH11P55287 RPS27AP11-201ENST00000402798 447 ntBASIC4.53□□□□□ -1.68
CDH11P55287 AL355615.1-201ENST00000406187 641 ntBASIC4.53□□□□□ -1.68
CDH11P55287 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC4.53□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 98.2 ms